RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 FGAP02671 866 aa22.34■■□□□ 1.17
VPS33A-205ENST00000541169 SHMT1P34896 483 aa22.34■■□□□ 1.17
VPS33A-205ENST00000541169 PPARAQ07869 468 aa22.34■■□□□ 1.17
VPS33A-205ENST00000541169 GRM1Q13255 1194 aa22.34■■□□□ 1.17
VPS33A-205ENST00000541169 SLC4A8Q2Y0W8 1093 aa22.34■■□□□ 1.17
VPS33A-205ENST00000541169 OTUD5Q96G74 571 aa22.34■■□□□ 1.17
VPS33A-205ENST00000541169 MYH8P13535 1937 aa22.33■■□□□ 1.17
VPS33A-205ENST00000541169 FAM196BA6NMK8 535 aa22.33■■□□□ 1.17
VPS33A-205ENST00000541169 FOXP2O15409 715 aa22.33■■□□□ 1.17
VPS33A-205ENST00000541169 EIF5BO60841 1220 aaKnown RBP22.33■■□□□ 1.17
VPS33A-205ENST00000541169 CYP2D6P10635 497 aa22.33■■□□□ 1.17
VPS33A-205ENST00000541169 CDK8P49336 464 aa22.33■■□□□ 1.17
VPS33A-205ENST00000541169 SNAPC2Q13487 334 aa22.33■■□□□ 1.17
VPS33A-205ENST00000541169 ABCB5Q2M3G0 1257 aa22.33■■□□□ 1.17
VPS33A-205ENST00000541169 VPS53Q5VIR6 699 aa22.33■■□□□ 1.17
VPS33A-205ENST00000541169 OTUD7BQ6GQQ9 843 aa22.33■■□□□ 1.17
VPS33A-205ENST00000541169 MKNK2Q9HBH9 465 aa22.33■■□□□ 1.17
VPS33A-205ENST00000541169 ATAD5Q96QE3 1844 aa22.33■■□□□ 1.16
VPS33A-205ENST00000541169 CA12O43570 354 aa22.32■■□□□ 1.16
VPS33A-205ENST00000541169 CETPP11597 493 aa22.32■■□□□ 1.16
VPS33A-205ENST00000541169 TM4SF4P48230 202 aa22.32■■□□□ 1.16
VPS33A-205ENST00000541169 TMEM179Q6ZVK1 233 aa22.32■■□□□ 1.16
VPS33A-205ENST00000541169 SKAP1Q86WV1 359 aa22.32■■□□□ 1.16
VPS33A-205ENST00000541169 BEGAINQ9BUH8 593 aa22.32■■□□□ 1.16
VPS33A-205ENST00000541169 KCNH4Q9UQ05 1017 aa22.32■■□□□ 1.16
VPS33A-205ENST00000541169 ZHX2Q9Y6X8 837 aa22.32■■□□□ 1.16
VPS33A-205ENST00000541169 ALDH1A1P00352 501 aa22.31■■□□□ 1.16
VPS33A-205ENST00000541169 KIF23Q02241 960 aaPredicted RBP22.31■■□□□ 1.16
VPS33A-205ENST00000541169 PPP4R3BQ5MIZ7 849 aa22.31■■□□□ 1.16
VPS33A-205ENST00000541169 ESYT1Q9BSJ8 1104 aa22.31■■□□□ 1.16
VPS33A-205ENST00000541169 WDR18Q9BV38 432 aa22.31■■□□□ 1.16
VPS33A-205ENST00000541169 RNF41Q9H4P4 317 aaPredicted RBP22.31■■□□□ 1.16
VPS33A-205ENST00000541169 ZBTB21Q9ULJ3 1066 aa22.31■■□□□ 1.16
VPS33A-205ENST00000541169 CYP2D7A0A087X1C5 515 aa22.3■■□□□ 1.16
VPS33A-205ENST00000541169 TESPA1A2RU30 521 aaPredicted RBP22.3■■□□□ 1.16
VPS33A-205ENST00000541169 ZNF213O14771 459 aa22.3■■□□□ 1.16
VPS33A-205ENST00000541169 IMMTQ16891 758 aaKnown RBP22.3■■□□□ 1.16
VPS33A-205ENST00000541169 ZNF444Q8N0Y2 327 aaPredicted RBP22.3■■□□□ 1.16
VPS33A-205ENST00000541169 ZNF280CQ8ND82 737 aa22.3■■□□□ 1.16
VPS33A-205ENST00000541169 DYNLL2Q96FJ2 89 aa22.3■■□□□ 1.16
VPS33A-205ENST00000541169 ZCCHC17Q9NP64 241 aaKnown RBP22.3■■□□□ 1.16
VPS33A-205ENST00000541169 AFG3L2Q9Y4W6 797 aa22.3■■□□□ 1.16
VPS33A-205ENST00000541169 U3KPZ7 1027 aaPredicted RBP22.3■■□□□ 1.16
VPS33A-205ENST00000541169 C19orf81C9J6K1 198 aa22.29■■□□□ 1.16
VPS33A-205ENST00000541169 IRF6O14896 467 aa22.29■■□□□ 1.16
VPS33A-205ENST00000541169 GH2P01242 217 aa22.29■■□□□ 1.16
VPS33A-205ENST00000541169 FASTKD5Q7L8L6 764 aaKnown RBP22.29■■□□□ 1.16
VPS33A-205ENST00000541169 AOC2O75106 756 aa22.28■■□□□ 1.16
VPS33A-205ENST00000541169 FGRP09769 529 aa22.28■■□□□ 1.16
VPS33A-205ENST00000541169 MS4A4AQ96JQ5 239 aa22.28■■□□□ 1.16
VPS33A-205ENST00000541169 SH2D4AQ9H788 454 aa22.28■■□□□ 1.16
VPS33A-205ENST00000541169 KANSL2Q9H9L4 492 aa22.28■■□□□ 1.16
VPS33A-205ENST00000541169 MPHOSPH10O00566 681 aaKnown RBP22.27■■□□□ 1.16
VPS33A-205ENST00000541169 ORC4O43929 436 aa22.27■■□□□ 1.16
VPS33A-205ENST00000541169 GDF11O95390 407 aa22.27■■□□□ 1.16
VPS33A-205ENST00000541169 SLURP2P0DP57 97 aa22.27■■□□□ 1.16
VPS33A-205ENST00000541169 GJA5P36382 358 aa22.27■■□□□ 1.16
VPS33A-205ENST00000541169 RRP1BQ14684 758 aaKnown RBP22.27■■□□□ 1.16
VPS33A-205ENST00000541169 MAP4K1Q92918 833 aa22.27■■□□□ 1.16
VPS33A-205ENST00000541169 SAGE1Q9NXZ1 904 aa22.27■■□□□ 1.16
VPS33A-205ENST00000541169 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.27■■□□□ 1.16
VPS33A-205ENST00000541169 USP17L10C9JJH3 530 aa22.26■■□□□ 1.15
VPS33A-205ENST00000541169 EPB41L2O43491 1005 aaKnown RBP22.26■■□□□ 1.15
VPS33A-205ENST00000541169 RASA1P20936 1047 aa22.26■■□□□ 1.15
VPS33A-205ENST00000541169 USP14P54578 494 aa22.26■■□□□ 1.15
VPS33A-205ENST00000541169 RAB3GAP1Q15042 981 aa22.26■■□□□ 1.15
VPS33A-205ENST00000541169 AKNAD1Q5T1N1 836 aa22.26■■□□□ 1.15
VPS33A-205ENST00000541169 MFSD6Q6ZSS7 791 aa22.26■■□□□ 1.15
VPS33A-205ENST00000541169 SLC44A5Q8NCS7 719 aa22.26■■□□□ 1.15
VPS33A-205ENST00000541169 STAG1Q8WVM7 1258 aa22.26■■□□□ 1.15
VPS33A-205ENST00000541169 SYNPO2Q9UMS6 1093 aa22.26■■□□□ 1.15
VPS33A-205ENST00000541169 LAMA4Q16363 1823 aa22.26■■□□□ 1.15
VPS33A-205ENST00000541169 PHIPQ8WWQ0 1821 aa22.26■■□□□ 1.15
VPS33A-205ENST00000541169 CCL15-CCL14A0A0B4J2E2 113 aa22.25■■□□□ 1.15
VPS33A-205ENST00000541169 A0A0G2JLL6 359 aaPredicted RBP22.25■■□□□ 1.15
VPS33A-205ENST00000541169 REC8O95072 547 aa22.25■■□□□ 1.15
VPS33A-205ENST00000541169 MKRN3Q13064 507 aaKnown RBP22.25■■□□□ 1.15
VPS33A-205ENST00000541169 CCL15Q16663 113 aa22.25■■□□□ 1.15
VPS33A-205ENST00000541169 PRRT2Q7Z6L0 340 aaPredicted RBP22.25■■□□□ 1.15
VPS33A-205ENST00000541169 PROCA1Q8NCQ7 364 aaPredicted RBP22.25■■□□□ 1.15
VPS33A-205ENST00000541169 CNKSR2Q8WXI2 1034 aa22.25■■□□□ 1.15
VPS33A-205ENST00000541169 CNNM2Q9H8M5 875 aa22.25■■□□□ 1.15
VPS33A-205ENST00000541169 ARHGEF10LQ9HCE6 1279 aa22.25■■□□□ 1.15
VPS33A-205ENST00000541169 WBP1LQ9NX94 342 aa22.25■■□□□ 1.15
VPS33A-205ENST00000541169 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.25■■□□□ 1.15
VPS33A-205ENST00000541169 SLC45A1Q9Y2W3 748 aa22.25■■□□□ 1.15
VPS33A-205ENST00000541169 TSPY3P0CV98 308 aa22.24■■□□□ 1.15
VPS33A-205ENST00000541169 TSPY8P0CW00 308 aa22.24■■□□□ 1.15
VPS33A-205ENST00000541169 BACE1P56817 501 aa22.24■■□□□ 1.15
VPS33A-205ENST00000541169 SPP2Q13103 211 aa22.24■■□□□ 1.15
VPS33A-205ENST00000541169 SH3D19Q5HYK7 790 aa22.24■■□□□ 1.15
VPS33A-205ENST00000541169 IFNL1Q8IU54 200 aa22.24■■□□□ 1.15
VPS33A-205ENST00000541169 IL25Q9H293 177 aa22.24■■□□□ 1.15
VPS33A-205ENST00000541169 PLIN4Q96Q06 1357 aa22.24■■□□□ 1.15
VPS33A-205ENST00000541169 TRIM75PA6NK02 468 aa22.23■■□□□ 1.15
VPS33A-205ENST00000541169 AKR1B1P15121 316 aa22.23■■□□□ 1.15
VPS33A-205ENST00000541169 EVX2Q03828 476 aa22.23■■□□□ 1.15
VPS33A-205ENST00000541169 PABPC4Q13310 644 aaKnown RBP eCLIP22.23■■□□□ 1.15
VPS33A-205ENST00000541169 RNF20Q5VTR2 975 aa22.23■■□□□ 1.15
VPS33A-205ENST00000541169 ANKRD23Q86SG2 305 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms