RNA–Protein interactions for RNA: ENST00000540957.1

FERMT3-204, Transcript of fermitin family member 3, humanhuman

TSL 5

Gene FERMT3, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FERMT3-204ENST00000540957 DOCK1Q14185 1865 aa25.39■■□□□ 1.66
FERMT3-204ENST00000540957 SLC3A2P08195 630 aaKnown RBP25.39■■□□□ 1.66
FERMT3-204ENST00000540957 GTF2A2P52657 109 aa25.39■■□□□ 1.66
FERMT3-204ENST00000540957 BEGAINQ9BUH8 593 aa25.39■■□□□ 1.66
FERMT3-204ENST00000540957 FRMD4AQ9P2Q2 1039 aaPredicted RBP25.39■■□□□ 1.66
FERMT3-204ENST00000540957 ZBTB21Q9ULJ3 1066 aa25.39■■□□□ 1.66
FERMT3-204ENST00000540957 ROBO3Q96MS0 1386 aa25.39■■□□□ 1.65
FERMT3-204ENST00000540957 SMIM22K7EJ46 135 aa25.38■■□□□ 1.65
FERMT3-204ENST00000540957 IRF6O14896 467 aa25.38■■□□□ 1.65
FERMT3-204ENST00000540957 CDK8P49336 464 aa25.38■■□□□ 1.65
FERMT3-204ENST00000540957 SNAPC2Q13487 334 aa25.38■■□□□ 1.65
FERMT3-204ENST00000540957 ALX1Q15699 326 aa25.38■■□□□ 1.65
FERMT3-204ENST00000540957 ABCB5Q2M3G0 1257 aa25.38■■□□□ 1.65
FERMT3-204ENST00000540957 STK11IPQ8N1F8 1099 aa25.38■■□□□ 1.65
FERMT3-204ENST00000540957 ZNF287Q9HBT7 754 aa25.38■■□□□ 1.65
FERMT3-204ENST00000540957 CABP5Q9NP86 173 aa25.38■■□□□ 1.65
FERMT3-204ENST00000540957 USP17L5A8MUK1 530 aa25.37■■□□□ 1.65
FERMT3-204ENST00000540957 MPHOSPH10O00566 681 aaKnown RBP25.37■■□□□ 1.65
FERMT3-204ENST00000540957 GH2P01242 217 aa25.37■■□□□ 1.65
FERMT3-204ENST00000540957 INHBEP58166 350 aa25.37■■□□□ 1.65
FERMT3-204ENST00000540957 PPARAQ07869 468 aa25.37■■□□□ 1.65
FERMT3-204ENST00000540957 CASC1Q6TDU7 716 aa25.37■■□□□ 1.65
FERMT3-204ENST00000540957 TBC1D2Q9BYX2 928 aa25.37■■□□□ 1.65
FERMT3-204ENST00000540957 MKNK2Q9HBH9 465 aa25.37■■□□□ 1.65
FERMT3-204ENST00000540957 AS3MTQ9HBK9 375 aa25.37■■□□□ 1.65
FERMT3-204ENST00000540957 ZMYM6O95789 1325 aa25.37■■□□□ 1.65
FERMT3-204ENST00000540957 FGAP02671 866 aa25.36■■□□□ 1.65
FERMT3-204ENST00000540957 CCDC84Q86UT8 332 aaPredicted RBP25.36■■□□□ 1.65
FERMT3-204ENST00000540957 IL25Q9H293 177 aa25.36■■□□□ 1.65
FERMT3-204ENST00000540957 CCL15-CCL14A0A0B4J2E2 113 aa25.35■■□□□ 1.65
FERMT3-204ENST00000540957 CETPP11597 493 aa25.35■■□□□ 1.65
FERMT3-204ENST00000540957 JAG1P78504 1218 aa25.35■■□□□ 1.65
FERMT3-204ENST00000540957 RAB3GAP1Q15042 981 aa25.35■■□□□ 1.65
FERMT3-204ENST00000540957 CCL15Q16663 113 aa25.35■■□□□ 1.65
FERMT3-204ENST00000540957 SHROOM1Q2M3G4 852 aaPredicted RBP25.35■■□□□ 1.65
FERMT3-204ENST00000540957 DSCC1Q9BVC3 393 aa25.35■■□□□ 1.65
FERMT3-204ENST00000540957 KCNH4Q9UQ05 1017 aa25.35■■□□□ 1.65
FERMT3-204ENST00000540957 AFG3L2Q9Y4W6 797 aa25.35■■□□□ 1.65
FERMT3-204ENST00000540957 LAMB1P07942 1786 aa25.35■■□□□ 1.65
FERMT3-204ENST00000540957 TRIM75PA6NK02 468 aa25.34■■□□□ 1.65
FERMT3-204ENST00000540957 CXCL11O14625 94 aa25.34■■□□□ 1.65
FERMT3-204ENST00000540957 SGSM2O43147 1006 aa25.34■■□□□ 1.65
FERMT3-204ENST00000540957 CDC45O75419 566 aa25.34■■□□□ 1.65
FERMT3-204ENST00000540957 TM4SF4P48230 202 aa25.34■■□□□ 1.65
FERMT3-204ENST00000540957 PDE4BQ07343 736 aa25.34■■□□□ 1.65
FERMT3-204ENST00000540957 ZNF280CQ8ND82 737 aa25.34■■□□□ 1.65
FERMT3-204ENST00000540957 MS4A4AQ96JQ5 239 aa25.34■■□□□ 1.65
FERMT3-204ENST00000540957 CCDC17Q96LX7 622 aa25.34■■□□□ 1.65
FERMT3-204ENST00000540957 WBP1LQ9NX94 342 aa25.34■■□□□ 1.65
FERMT3-204ENST00000540957 HSPA1AP0DMV8 641 aaKnown RBP25.33■■□□□ 1.65
FERMT3-204ENST00000540957 HSPA1BP0DMV9 641 aaKnown RBP25.33■■□□□ 1.65
FERMT3-204ENST00000540957 AKR1B1P15121 316 aa25.32■■□□□ 1.64
FERMT3-204ENST00000540957 SPP2Q13103 211 aa25.32■■□□□ 1.64
FERMT3-204ENST00000540957 OTUD7BQ6GQQ9 843 aa25.32■■□□□ 1.64
FERMT3-204ENST00000540957 TMEM179Q6ZVK1 233 aa25.32■■□□□ 1.64
FERMT3-204ENST00000540957 BRI3BPQ8WY22 251 aa25.32■■□□□ 1.64
FERMT3-204ENST00000540957 CTNNA3Q9UI47 895 aa25.32■■□□□ 1.64
FERMT3-204ENST00000540957 ANAPC4Q9UJX5 808 aa25.32■■□□□ 1.64
FERMT3-204ENST00000540957 ATAD5Q96QE3 1844 aa25.31■■□□□ 1.64
FERMT3-204ENST00000540957 TESPA1A2RU30 521 aaPredicted RBP25.31■■□□□ 1.64
FERMT3-204ENST00000540957 CA12O43570 354 aa25.31■■□□□ 1.64
FERMT3-204ENST00000540957 CTDSPL2Q05D32 466 aa25.31■■□□□ 1.64
FERMT3-204ENST00000540957 KIAA1211Q6ZU35 1233 aa25.31■■□□□ 1.64
FERMT3-204ENST00000540957 IFNL1Q8IU54 200 aa25.31■■□□□ 1.64
FERMT3-204ENST00000540957 ESYT1Q9BSJ8 1104 aa25.31■■□□□ 1.64
FERMT3-204ENST00000540957 WDR18Q9BV38 432 aa25.31■■□□□ 1.64
FERMT3-204ENST00000540957 PRDM1O75626 825 aa25.3■■□□□ 1.64
FERMT3-204ENST00000540957 RASA1P20936 1047 aa25.3■■□□□ 1.64
FERMT3-204ENST00000540957 HAND2P61296 217 aa25.3■■□□□ 1.64
FERMT3-204ENST00000540957 SEPT2Q15019 361 aa25.3■■□□□ 1.64
FERMT3-204ENST00000540957 ZNF444Q8N0Y2 327 aaPredicted RBP25.3■■□□□ 1.64
FERMT3-204ENST00000540957 A0A0G2JLL6 359 aaPredicted RBP25.29■■□□□ 1.64
FERMT3-204ENST00000540957 ZNF213O14771 459 aa25.29■■□□□ 1.64
FERMT3-204ENST00000540957 ALDH1A1P00352 501 aa25.29■■□□□ 1.64
FERMT3-204ENST00000540957 PRRT2Q7Z6L0 340 aaPredicted RBP25.29■■□□□ 1.64
FERMT3-204ENST00000540957 FEZ1Q99689 392 aa25.29■■□□□ 1.64
FERMT3-204ENST00000540957 RNF186Q9NXI6 227 aa25.29■■□□□ 1.64
FERMT3-204ENST00000540957 SAGE1Q9NXZ1 904 aa25.29■■□□□ 1.64
FERMT3-204ENST00000540957 PCNTO95613 3336 aa25.28■■□□□ 1.64
FERMT3-204ENST00000540957 IGF2BP3O00425 579 aaKnown RBP eCLIP25.28■■□□□ 1.64
FERMT3-204ENST00000540957 GUCY1A2P33402 732 aa25.28■■□□□ 1.64
FERMT3-204ENST00000540957 MTMR2Q13614 643 aa25.28■■□□□ 1.64
FERMT3-204ENST00000540957 IMMTQ16891 758 aaKnown RBP25.28■■□□□ 1.64
FERMT3-204ENST00000540957 GADL1Q6ZQY3 521 aa25.28■■□□□ 1.64
FERMT3-204ENST00000540957 FASTKD5Q7L8L6 764 aaKnown RBP25.28■■□□□ 1.64
FERMT3-204ENST00000540957 PTPN18Q99952 460 aa25.28■■□□□ 1.64
FERMT3-204ENST00000540957 USP17L10C9JJH3 530 aa25.27■■□□□ 1.64
FERMT3-204ENST00000540957 TRPA1O75762 1119 aa25.27■■□□□ 1.64
FERMT3-204ENST00000540957 TOMM22Q9NS69 142 aa25.27■■□□□ 1.64
FERMT3-204ENST00000540957 TSPY3P0CV98 308 aa25.26■■□□□ 1.63
FERMT3-204ENST00000540957 TSPY8P0CW00 308 aa25.26■■□□□ 1.63
FERMT3-204ENST00000540957 HMGCS2P54868 508 aa25.26■■□□□ 1.63
FERMT3-204ENST00000540957 BACE1P56817 501 aa25.26■■□□□ 1.63
FERMT3-204ENST00000540957 PTH1RQ03431 593 aa25.26■■□□□ 1.63
FERMT3-204ENST00000540957 ICA1Q05084 483 aa25.26■■□□□ 1.63
FERMT3-204ENST00000540957 RNF41Q9H4P4 317 aaPredicted RBP25.26■■□□□ 1.63
FERMT3-204ENST00000540957 TMOD4Q9NZQ9 345 aa25.26■■□□□ 1.63
FERMT3-204ENST00000540957 DDX52Q9Y2R4 599 aaKnown RBP eCLIP25.26■■□□□ 1.63
FERMT3-204ENST00000540957 U3KPZ7 1027 aaPredicted RBP25.26■■□□□ 1.63
FERMT3-204ENST00000540957 C19orf81C9J6K1 198 aa25.25■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms