RNA–Protein interactions for RNA: ENST00000540755.5

CYB561A3-216, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-216ENST00000540755 DEFB115Q30KQ5 88 aa16.71■□□□□ 0.27
CYB561A3-216ENST00000540755 CFAP100Q494V2 611 aa16.71■□□□□ 0.27
CYB561A3-216ENST00000540755 TMTC2Q8N394 836 aa16.71■□□□□ 0.27
CYB561A3-216ENST00000540755 UBAC1Q9BSL1 405 aa16.71■□□□□ 0.27
CYB561A3-216ENST00000540755 IDI2Q9BXS1 227 aa16.71■□□□□ 0.27
CYB561A3-216ENST00000540755 ZNF287Q9HBT7 754 aa16.71■□□□□ 0.27
CYB561A3-216ENST00000540755 WBP1LQ9NX94 342 aa16.71■□□□□ 0.27
CYB561A3-216ENST00000540755 PGAP2Q9UHJ9 254 aa16.71■□□□□ 0.27
CYB561A3-216ENST00000540755 SAP30BPQ9UHR5 308 aaKnown RBP16.71■□□□□ 0.27
CYB561A3-216ENST00000540755 RANBP6O60518 1105 aaKnown RBP16.7■□□□□ 0.26
CYB561A3-216ENST00000540755 PRDM1O75626 825 aa16.7■□□□□ 0.26
CYB561A3-216ENST00000540755 GJB2P29033 226 aa16.7■□□□□ 0.26
CYB561A3-216ENST00000540755 MMP14P50281 582 aa16.7■□□□□ 0.26
CYB561A3-216ENST00000540755 WTAPQ15007 396 aa16.7■□□□□ 0.26
CYB561A3-216ENST00000540755 C16orf86Q6ZW13 317 aa16.7■□□□□ 0.26
CYB561A3-216ENST00000540755 TTC6Q86TZ1 520 aa16.7■□□□□ 0.26
CYB561A3-216ENST00000540755 IQCA1Q86XH1 822 aa16.7■□□□□ 0.26
CYB561A3-216ENST00000540755 OSBPL5Q9H0X9 879 aaPredicted RBP16.7■□□□□ 0.26
CYB561A3-216ENST00000540755 DDX4Q9NQI0 724 aaKnown RBP16.7■□□□□ 0.26
CYB561A3-216ENST00000540755 NID2Q14112 1375 aa16.7■□□□□ 0.26
CYB561A3-216ENST00000540755 WDR33Q9C0J8 1336 aaKnown RBP16.69■□□□□ 0.26
CYB561A3-216ENST00000540755 GOLGA8BA8MQT2 603 aa16.69■□□□□ 0.26
CYB561A3-216ENST00000540755 PDIA4P13667 645 aaKnown RBP16.69■□□□□ 0.26
CYB561A3-216ENST00000540755 RCAN1P53805 252 aa16.69■□□□□ 0.26
CYB561A3-216ENST00000540755 PICALMQ13492 652 aa16.69■□□□□ 0.26
CYB561A3-216ENST00000540755 SEC23AQ15436 765 aa16.69■□□□□ 0.26
CYB561A3-216ENST00000540755 APOA5Q6Q788 366 aa16.69■□□□□ 0.26
CYB561A3-216ENST00000540755 OGFOD1Q8N543 542 aa16.69■□□□□ 0.26
CYB561A3-216ENST00000540755 ZSCAN10Q96SZ4 725 aaPredicted RBP16.69■□□□□ 0.26
CYB561A3-216ENST00000540755 GLIS2Q9BZE0 524 aaPredicted RBP16.69■□□□□ 0.26
CYB561A3-216ENST00000540755 NAP1L2Q9ULW6 460 aaPredicted RBP16.69■□□□□ 0.26
CYB561A3-216ENST00000540755 HPS5Q9UPZ3 1129 aa16.69■□□□□ 0.26
CYB561A3-216ENST00000540755 ZBTB12Q9Y330 459 aaPredicted RBP16.69■□□□□ 0.26
CYB561A3-216ENST00000540755 PCDHAC2Q9Y5I4 1007 aa16.69■□□□□ 0.26
CYB561A3-216ENST00000540755 SIPA1L1O43166 1804 aa16.69■□□□□ 0.26
CYB561A3-216ENST00000540755 TNKSO95271 1327 aa16.69■□□□□ 0.26
CYB561A3-216ENST00000540755 CCDC69A6NI79 296 aa16.68■□□□□ 0.26
CYB561A3-216ENST00000540755 BRD1O95696 1058 aa16.68■□□□□ 0.26
CYB561A3-216ENST00000540755 SLC4A8Q2Y0W8 1093 aa16.68■□□□□ 0.26
CYB561A3-216ENST00000540755 NFXL1Q6ZNB6 911 aa16.68■□□□□ 0.26
CYB561A3-216ENST00000540755 MICALL2Q8IY33 904 aa16.68■□□□□ 0.26
CYB561A3-216ENST00000540755 MTMR14Q8NCE2 650 aa16.68■□□□□ 0.26
CYB561A3-216ENST00000540755 SMARCC2Q8TAQ2 1214 aa16.68■□□□□ 0.26
CYB561A3-216ENST00000540755 TNPO1Q92973 898 aaKnown RBP16.68■□□□□ 0.26
CYB561A3-216ENST00000540755 DYNLL2Q96FJ2 89 aa16.68■□□□□ 0.26
CYB561A3-216ENST00000540755 ZKSCAN3Q9BRR0 538 aa16.68■□□□□ 0.26
CYB561A3-216ENST00000540755 MKNK2Q9HBH9 465 aa16.68■□□□□ 0.26
CYB561A3-216ENST00000540755 SENP2Q9HC62 589 aa16.68■□□□□ 0.26
CYB561A3-216ENST00000540755 COL2A1P02458 1487 aaPredicted RBP16.68■□□□□ 0.26
CYB561A3-216ENST00000540755 DHX16O60231 1041 aaKnown RBP16.67■□□□□ 0.26
CYB561A3-216ENST00000540755 CAPN15O75808 1086 aa16.67■□□□□ 0.26
CYB561A3-216ENST00000540755 EGFRP00533 1210 aa16.67■□□□□ 0.26
CYB561A3-216ENST00000540755 RPS12P25398 132 aaKnown RBP16.67■□□□□ 0.26
CYB561A3-216ENST00000540755 CCT2P78371 535 aaKnown RBP16.67■□□□□ 0.26
CYB561A3-216ENST00000540755 HMGN5P82970 282 aaKnown RBP16.67■□□□□ 0.26
CYB561A3-216ENST00000540755 NFIAQ12857 509 aa16.67■□□□□ 0.26
CYB561A3-216ENST00000540755 PKP1Q13835 747 aa16.67■□□□□ 0.26
CYB561A3-216ENST00000540755 NSUN7Q8NE18 718 aaKnown RBP16.67■□□□□ 0.26
CYB561A3-216ENST00000540755 CAPNS2Q96L46 248 aa16.67■□□□□ 0.26
CYB561A3-216ENST00000540755 CNOT7Q9UIV1 285 aaKnown RBP16.67■□□□□ 0.26
CYB561A3-216ENST00000540755 TAOK2Q9UL54 1235 aa16.67■□□□□ 0.26
CYB561A3-216ENST00000540755 ZDHHC9Q9Y397 364 aa16.67■□□□□ 0.26
CYB561A3-216ENST00000540755 SLC12A7Q9Y666 1083 aa16.67■□□□□ 0.26
CYB561A3-216ENST00000540755 TLL2Q9Y6L7 1015 aa16.67■□□□□ 0.26
CYB561A3-216ENST00000540755 SPDYE2BA6NHP3 402 aa16.67■□□□□ 0.26
CYB561A3-216ENST00000540755 TSPY2A6NKD2 308 aa16.67■□□□□ 0.26
CYB561A3-216ENST00000540755 ZBTB43O43298 467 aa16.67■□□□□ 0.26
CYB561A3-216ENST00000540755 SPDYE6P0CI01 402 aa16.67■□□□□ 0.26
CYB561A3-216ENST00000540755 CDK8P49336 464 aa16.67■□□□□ 0.26
CYB561A3-216ENST00000540755 CTCFP49711 727 aaPredicted RBP16.67■□□□□ 0.26
CYB561A3-216ENST00000540755 METAP2P50579 478 aaKnown RBP eCLIP16.67■□□□□ 0.26
CYB561A3-216ENST00000540755 GABPAQ06546 454 aa16.67■□□□□ 0.26
CYB561A3-216ENST00000540755 CCDC178Q5BJE1 867 aa16.67■□□□□ 0.26
CYB561A3-216ENST00000540755 SYNE3Q6ZMZ3 975 aa16.67■□□□□ 0.26
CYB561A3-216ENST00000540755 ENAHQ8N8S7 591 aaPredicted RBP16.67■□□□□ 0.26
CYB561A3-216ENST00000540755 ZC3H15Q8WU90 426 aaKnown RBP16.67■□□□□ 0.26
CYB561A3-216ENST00000540755 DPF2Q92785 391 aa16.67■□□□□ 0.26
CYB561A3-216ENST00000540755 PRMT6Q96LA8 375 aaPredicted RBP16.67■□□□□ 0.26
CYB561A3-216ENST00000540755 DHX36Q9H2U1 1008 aaKnown RBP16.67■□□□□ 0.26
CYB561A3-216ENST00000540755 PRDM10Q9NQV6 1147 aa16.67■□□□□ 0.26
CYB561A3-216ENST00000540755 TCP11L1Q9NUJ3 509 aa16.67■□□□□ 0.26
CYB561A3-216ENST00000540755 ENTPD3O75355 529 aa16.66■□□□□ 0.26
CYB561A3-216ENST00000540755 CTDNEP1O95476 244 aa16.66■□□□□ 0.26
CYB561A3-216ENST00000540755 HLA-DOAP06340 250 aa16.66■□□□□ 0.26
CYB561A3-216ENST00000540755 RASA1P20936 1047 aa16.66■□□□□ 0.26
CYB561A3-216ENST00000540755 PDCP20941 246 aa16.66■□□□□ 0.26
CYB561A3-216ENST00000540755 SYT1P21579 422 aa16.66■□□□□ 0.26
CYB561A3-216ENST00000540755 DLGAP5Q15398 846 aa16.66■□□□□ 0.26
CYB561A3-216ENST00000540755 NFKBIBQ15653 356 aa16.66■□□□□ 0.26
CYB561A3-216ENST00000540755 FAM47AQ5JRC9 791 aa16.66■□□□□ 0.26
CYB561A3-216ENST00000540755 CYP4F22Q6NT55 531 aa16.66■□□□□ 0.26
CYB561A3-216ENST00000540755 CLEC17AQ6ZS10 378 aa16.66■□□□□ 0.26
CYB561A3-216ENST00000540755 ZNF444Q8N0Y2 327 aaPredicted RBP16.66■□□□□ 0.26
CYB561A3-216ENST00000540755 EHD4Q9H223 541 aa16.66■□□□□ 0.26
CYB561A3-216ENST00000540755 TDRD3Q9H7E2 651 aaKnown RBP16.66■□□□□ 0.26
CYB561A3-216ENST00000540755 NCOA5Q9HCD5 579 aaKnown RBP16.66■□□□□ 0.26
CYB561A3-216ENST00000540755 FAM198AQ9UFP1 575 aa16.66■□□□□ 0.26
CYB561A3-216ENST00000540755 SWAP70Q9UH65 585 aa16.66■□□□□ 0.26
CYB561A3-216ENST00000540755 PTPDC1A2A3K4 754 aa16.65■□□□□ 0.26
CYB561A3-216ENST00000540755 STX6O43752 255 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms