RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 ROBO3Q96MS0 1386 aa12.6□□□□□ -0.39
ATL3-204ENST00000540699 HLA-DOAP06340 250 aa12.6□□□□□ -0.39
ATL3-204ENST00000540699 SLURP2P0DP57 97 aa12.6□□□□□ -0.39
ATL3-204ENST00000540699 PLCD1P51178 756 aa12.6□□□□□ -0.39
ATL3-204ENST00000540699 NECTIN1Q15223 517 aa12.6□□□□□ -0.39
ATL3-204ENST00000540699 RABEP1Q15276 862 aa12.6□□□□□ -0.39
ATL3-204ENST00000540699 ALX1Q15699 326 aa12.6□□□□□ -0.39
ATL3-204ENST00000540699 C12orf60Q5U649 245 aa12.6□□□□□ -0.39
ATL3-204ENST00000540699 REM2Q8IYK8 340 aaPredicted RBP12.6□□□□□ -0.39
ATL3-204ENST00000540699 SNX21Q969T3 373 aa12.6□□□□□ -0.39
ATL3-204ENST00000540699 WRNIP1Q96S55 665 aa12.6□□□□□ -0.39
ATL3-204ENST00000540699 ARPP21Q9UBL0 812 aaPredicted RBP12.6□□□□□ -0.39
ATL3-204ENST00000540699 GREB1LQ9C091 1923 aaPredicted RBP12.6□□□□□ -0.39
ATL3-204ENST00000540699 ZMYM6O95789 1325 aa12.6□□□□□ -0.39
ATL3-204ENST00000540699 USP17L12C9JPN9 530 aa12.59□□□□□ -0.39
ATL3-204ENST00000540699 USP17L21D6R901 530 aa12.59□□□□□ -0.39
ATL3-204ENST00000540699 INPP5BP32019 993 aa12.59□□□□□ -0.39
ATL3-204ENST00000540699 VGLL4Q14135 290 aa12.59□□□□□ -0.39
ATL3-204ENST00000540699 VPS53Q5VIR6 699 aa12.59□□□□□ -0.39
ATL3-204ENST00000540699 TATDN1Q6P1N9 297 aa12.59□□□□□ -0.39
ATL3-204ENST00000540699 CTR9Q6PD62 1173 aa12.59□□□□□ -0.39
ATL3-204ENST00000540699 IFNL3Q8IZI9 196 aa12.59□□□□□ -0.39
ATL3-204ENST00000540699 CLMNQ96JQ2 1002 aa12.59□□□□□ -0.39
ATL3-204ENST00000540699 DSCC1Q9BVC3 393 aa12.59□□□□□ -0.39
ATL3-204ENST00000540699 TBC1D2Q9BYX2 928 aa12.59□□□□□ -0.39
ATL3-204ENST00000540699 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.59□□□□□ -0.39
ATL3-204ENST00000540699 SERPINB13Q9UIV8 391 aa12.59□□□□□ -0.39
ATL3-204ENST00000540699 RBM8AQ9Y5S9 174 aaKnown RBP12.59□□□□□ -0.39
ATL3-204ENST00000540699 SNCAIPQ9Y6H5 919 aa12.59□□□□□ -0.39
ATL3-204ENST00000540699 HTTP42858 3142 aa12.59□□□□□ -0.39
ATL3-204ENST00000540699 SPDYE5A6NIY4 337 aa12.58□□□□□ -0.4
ATL3-204ENST00000540699 FAM196BA6NMK8 535 aa12.58□□□□□ -0.4
ATL3-204ENST00000540699 CTNND1O60716 968 aaKnown RBP12.58□□□□□ -0.4
ATL3-204ENST00000540699 POLR3DP05423 398 aaPredicted RBP12.58□□□□□ -0.4
ATL3-204ENST00000540699 CYP2D6P10635 497 aa12.58□□□□□ -0.4
ATL3-204ENST00000540699 HSPD1P10809 573 aaKnown RBP12.58□□□□□ -0.4
ATL3-204ENST00000540699 EVX2Q03828 476 aa12.58□□□□□ -0.4
ATL3-204ENST00000540699 RRP1BQ14684 758 aaKnown RBP12.58□□□□□ -0.4
ATL3-204ENST00000540699 RASEFQ8IZ41 740 aa12.58□□□□□ -0.4
ATL3-204ENST00000540699 ZKSCAN4Q969J2 545 aaPredicted RBP12.58□□□□□ -0.4
ATL3-204ENST00000540699 NACAP1Q9BZK3 213 aa12.58□□□□□ -0.4
ATL3-204ENST00000540699 SNX14Q9Y5W7 946 aa12.58□□□□□ -0.4
ATL3-204ENST00000540699 CSADQ9Y600 493 aa12.58□□□□□ -0.4
ATL3-204ENST00000540699 CYP2D7A0A087X1C5 515 aa12.57□□□□□ -0.4
ATL3-204ENST00000540699 CD2BP2O95400 341 aaKnown RBP12.57□□□□□ -0.4
ATL3-204ENST00000540699 ZBTB48P10074 688 aaPredicted RBP12.57□□□□□ -0.4
ATL3-204ENST00000540699 SHMT1P34896 483 aa12.57□□□□□ -0.4
ATL3-204ENST00000540699 CAP2P40123 477 aa12.57□□□□□ -0.4
ATL3-204ENST00000540699 BECN1Q14457 450 aa12.57□□□□□ -0.4
ATL3-204ENST00000540699 SPRYD7Q5W111 196 aa12.57□□□□□ -0.4
ATL3-204ENST00000540699 CREB3L3Q68CJ9 461 aa12.57□□□□□ -0.4
ATL3-204ENST00000540699 AMOTL1Q8IY63 956 aa12.57□□□□□ -0.4
ATL3-204ENST00000540699 SCYL3Q8IZE3 742 aa12.57□□□□□ -0.4
ATL3-204ENST00000540699 CRACR2BQ8N4Y2 399 aaPredicted RBP12.57□□□□□ -0.4
ATL3-204ENST00000540699 SLC10A4Q96EP9 437 aa12.57□□□□□ -0.4
ATL3-204ENST00000540699 WNK4Q96J92 1243 aa12.57□□□□□ -0.4
ATL3-204ENST00000540699 GINM1Q9NU53 330 aa12.57□□□□□ -0.4
ATL3-204ENST00000540699 SWAP70Q9UH65 585 aa12.57□□□□□ -0.4
ATL3-204ENST00000540699 U3KPZ7 1027 aaPredicted RBP12.57□□□□□ -0.4
ATL3-204ENST00000540699 SMIM22K7EJ46 135 aa12.56□□□□□ -0.4
ATL3-204ENST00000540699 SLC27A2O14975 620 aa12.56□□□□□ -0.4
ATL3-204ENST00000540699 APPP05067 770 aa12.56□□□□□ -0.4
ATL3-204ENST00000540699 GJA5P36382 358 aa12.56□□□□□ -0.4
ATL3-204ENST00000540699 TDO2P48775 406 aa12.56□□□□□ -0.4
ATL3-204ENST00000540699 SLC4A8Q2Y0W8 1093 aa12.56□□□□□ -0.4
ATL3-204ENST00000540699 TSGA10IPQ3SY00 556 aa12.56□□□□□ -0.4
ATL3-204ENST00000540699 C16orf86Q6ZW13 317 aa12.56□□□□□ -0.4
ATL3-204ENST00000540699 ERO1BQ86YB8 467 aa12.56□□□□□ -0.4
ATL3-204ENST00000540699 NAPBQ9H115 298 aa12.56□□□□□ -0.4
ATL3-204ENST00000540699 ELP3Q9H9T3 547 aa12.56□□□□□ -0.4
ATL3-204ENST00000540699 ANAPC4Q9UJX5 808 aa12.56□□□□□ -0.4
ATL3-204ENST00000540699 CENPFP49454 3210 aa12.56□□□□□ -0.4
ATL3-204ENST00000540699 LOC285556D6RIA3 1793 aa12.56□□□□□ -0.4
ATL3-204ENST00000540699 FGAP02671 866 aa12.55□□□□□ -0.4
ATL3-204ENST00000540699 JAG1P78504 1218 aa12.55□□□□□ -0.4
ATL3-204ENST00000540699 PPATQ06203 517 aa12.55□□□□□ -0.4
ATL3-204ENST00000540699 PPIL2Q13356 520 aa12.55□□□□□ -0.4
ATL3-204ENST00000540699 IL27Q8NEV9 243 aa12.55□□□□□ -0.4
ATL3-204ENST00000540699 OPTNQ96CV9 577 aa12.55□□□□□ -0.4
ATL3-204ENST00000540699 TRIM34Q9BYJ4 488 aa12.55□□□□□ -0.4
ATL3-204ENST00000540699 TM6SF1Q9BZW5 370 aa12.55□□□□□ -0.4
ATL3-204ENST00000540699 MINDY4BA8MYZ0 360 aa12.54□□□□□ -0.4
ATL3-204ENST00000540699 ASNSP08243 561 aa12.54□□□□□ -0.4
ATL3-204ENST00000540699 PTPRAP18433 802 aa12.54□□□□□ -0.4
ATL3-204ENST00000540699 TM4SF4P48230 202 aa12.54□□□□□ -0.4
ATL3-204ENST00000540699 SLC4A3P48751 1232 aa12.54□□□□□ -0.4
ATL3-204ENST00000540699 CDK8P49336 464 aa12.54□□□□□ -0.4
ATL3-204ENST00000540699 SOX10P56693 466 aa12.54□□□□□ -0.4
ATL3-204ENST00000540699 PPARAQ07869 468 aa12.54□□□□□ -0.4
ATL3-204ENST00000540699 CTU1Q7Z7A3 348 aaKnown RBP12.54□□□□□ -0.4
ATL3-204ENST00000540699 SLC44A5Q8NCS7 719 aa12.54□□□□□ -0.4
ATL3-204ENST00000540699 CNKSR2Q8WXI2 1034 aa12.54□□□□□ -0.4
ATL3-204ENST00000540699 DYNLL2Q96FJ2 89 aa12.54□□□□□ -0.4
ATL3-204ENST00000540699 ZBTB21Q9ULJ3 1066 aa12.54□□□□□ -0.4
ATL3-204ENST00000540699 KCNH4Q9UQ05 1017 aa12.54□□□□□ -0.4
ATL3-204ENST00000540699 TAF6LQ9Y6J9 622 aa12.54□□□□□ -0.4
ATL3-204ENST00000540699 MYH4Q9Y623 1939 aa12.53□□□□□ -0.4
ATL3-204ENST00000540699 TESPA1A2RU30 521 aaPredicted RBP12.53□□□□□ -0.4
ATL3-204ENST00000540699 CYP21A2P08686 494 aa12.53□□□□□ -0.4
ATL3-204ENST00000540699 FGRP09769 529 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms