RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 BACE1P56817 501 aa12.54□□□□□ -0.4
CDCA3-208ENST00000540683 MOGSQ13724 837 aa12.54□□□□□ -0.4
CDCA3-208ENST00000540683 CCAR1Q8IX12 1150 aaKnown RBP12.54□□□□□ -0.4
CDCA3-208ENST00000540683 MIGA1Q8NAN2 632 aa12.54□□□□□ -0.4
CDCA3-208ENST00000540683 SLAIN1Q8ND83 568 aa12.54□□□□□ -0.4
CDCA3-208ENST00000540683 ZNF333Q96JL9 665 aa12.54□□□□□ -0.4
CDCA3-208ENST00000540683 HAUS7Q99871 368 aa12.54□□□□□ -0.4
CDCA3-208ENST00000540683 SWAP70Q9UH65 585 aa12.54□□□□□ -0.4
CDCA3-208ENST00000540683 MYPNQ86TC9 1320 aa12.54□□□□□ -0.4
CDCA3-208ENST00000540683 ADGRA2Q96PE1 1338 aa12.54□□□□□ -0.4
CDCA3-208ENST00000540683 MYH1P12882 1939 aa12.54□□□□□ -0.4
CDCA3-208ENST00000540683 RBBP6Q7Z6E9 1792 aaKnown RBP12.53□□□□□ -0.4
CDCA3-208ENST00000540683 PTPRFP10586 1907 aa12.53□□□□□ -0.4
CDCA3-208ENST00000540683 TNPO2O14787 897 aaKnown RBP12.53□□□□□ -0.4
CDCA3-208ENST00000540683 ERC2O15083 957 aa12.53□□□□□ -0.4
CDCA3-208ENST00000540683 ZFYP08048 801 aaPredicted RBP12.53□□□□□ -0.4
CDCA3-208ENST00000540683 GRK4P32298 578 aa12.53□□□□□ -0.4
CDCA3-208ENST00000540683 HMGCS2P54868 508 aa12.53□□□□□ -0.4
CDCA3-208ENST00000540683 CERKLQ49MI3 558 aaPredicted RBP12.53□□□□□ -0.4
CDCA3-208ENST00000540683 USP17L2Q6R6M4 530 aa12.53□□□□□ -0.4
CDCA3-208ENST00000540683 ADGRA1Q86SQ6 560 aa12.53□□□□□ -0.4
CDCA3-208ENST00000540683 SIRT2Q8IXJ6 389 aa12.53□□□□□ -0.4
CDCA3-208ENST00000540683 FEZ1Q99689 392 aa12.53□□□□□ -0.4
CDCA3-208ENST00000540683 SH2D4AQ9H788 454 aa12.53□□□□□ -0.4
CDCA3-208ENST00000540683 ECHDC1Q9NTX5 307 aa12.53□□□□□ -0.4
CDCA3-208ENST00000540683 SAP30BPQ9UHR5 308 aaKnown RBP12.53□□□□□ -0.4
CDCA3-208ENST00000540683 PTCH2Q9Y6C5 1203 aa12.53□□□□□ -0.4
CDCA3-208ENST00000540683 PHIPQ8WWQ0 1821 aa12.53□□□□□ -0.4
CDCA3-208ENST00000540683 CDK5RAP2Q96SN8 1893 aa12.53□□□□□ -0.4
CDCA3-208ENST00000540683 CYP2C8P10632 490 aa12.52□□□□□ -0.41
CDCA3-208ENST00000540683 HOXA7P31268 230 aaPredicted RBP12.52□□□□□ -0.41
CDCA3-208ENST00000540683 UBE3CQ15386 1083 aa12.52□□□□□ -0.41
CDCA3-208ENST00000540683 ABCB5Q2M3G0 1257 aa12.52□□□□□ -0.41
CDCA3-208ENST00000540683 TATDN1Q6P1N9 297 aa12.52□□□□□ -0.41
CDCA3-208ENST00000540683 GCC1Q96CN9 775 aa12.52□□□□□ -0.41
CDCA3-208ENST00000540683 DCTPP1Q9H773 170 aa12.52□□□□□ -0.41
CDCA3-208ENST00000540683 ZNF287Q9HBT7 754 aa12.52□□□□□ -0.41
CDCA3-208ENST00000540683 BIN2Q9UBW5 565 aaPredicted RBP12.52□□□□□ -0.41
CDCA3-208ENST00000540683 ZBTB21Q9ULJ3 1066 aa12.52□□□□□ -0.41
CDCA3-208ENST00000540683 PDE4DIPQ5VU43 2346 aa12.52□□□□□ -0.41
CDCA3-208ENST00000540683 ZNF532Q9HCE3 1301 aa12.52□□□□□ -0.41
CDCA3-208ENST00000540683 LOC285556D6RIA3 1793 aa12.51□□□□□ -0.41
CDCA3-208ENST00000540683 MYO5AQ9Y4I1 1855 aaKnown RBP12.51□□□□□ -0.41
CDCA3-208ENST00000540683 GLRX3O76003 335 aaKnown RBP12.51□□□□□ -0.41
CDCA3-208ENST00000540683 DYNLL1P63167 89 aaKnown RBP12.51□□□□□ -0.41
CDCA3-208ENST00000540683 CCNA1P78396 465 aa12.51□□□□□ -0.41
CDCA3-208ENST00000540683 IRF5Q13568 498 aa12.51□□□□□ -0.41
CDCA3-208ENST00000540683 MTMR2Q13614 643 aa12.51□□□□□ -0.41
CDCA3-208ENST00000540683 PRPF38BQ5VTL8 546 aaKnown RBP12.51□□□□□ -0.41
CDCA3-208ENST00000540683 TRMT44Q8IYL2 757 aaKnown RBP12.51□□□□□ -0.41
CDCA3-208ENST00000540683 PXYLP1Q8TE99 480 aa12.51□□□□□ -0.41
CDCA3-208ENST00000540683 CCDC17Q96LX7 622 aa12.51□□□□□ -0.41
CDCA3-208ENST00000540683 RIOK1Q9BRS2 568 aaKnown RBP12.51□□□□□ -0.41
CDCA3-208ENST00000540683 ANTXR1Q9H6X2 564 aa12.51□□□□□ -0.41
CDCA3-208ENST00000540683 MCM9Q9NXL9 1143 aa12.51□□□□□ -0.41
CDCA3-208ENST00000540683 FAM196BA6NMK8 535 aa12.5□□□□□ -0.41
CDCA3-208ENST00000540683 ADD2P35612 726 aa12.5□□□□□ -0.41
CDCA3-208ENST00000540683 ANKRD13CQ8N6S4 541 aa12.5□□□□□ -0.41
CDCA3-208ENST00000540683 BCL11AQ9H165 835 aa12.5□□□□□ -0.41
CDCA3-208ENST00000540683 ASCC2Q9H1I8 757 aaPredicted RBP12.5□□□□□ -0.41
CDCA3-208ENST00000540683 BOLA2Q9H3K6 86 aa12.5□□□□□ -0.41
CDCA3-208ENST00000540683 CWC22Q9HCG8 908 aaKnown RBP12.5□□□□□ -0.41
CDCA3-208ENST00000540683 TTC41PQ6P2S7 1318 aa12.5□□□□□ -0.41
CDCA3-208ENST00000540683 MGAMO43451 1857 aa12.49□□□□□ -0.41
CDCA3-208ENST00000540683 NAV1Q8NEY1 1877 aa12.49□□□□□ -0.41
CDCA3-208ENST00000540683 USP17L15C9J2P7 530 aa12.49□□□□□ -0.41
CDCA3-208ENST00000540683 USP17L13C9JLJ4 530 aa12.49□□□□□ -0.41
CDCA3-208ENST00000540683 USP17L11C9JVI0 530 aa12.49□□□□□ -0.41
CDCA3-208ENST00000540683 USP17L18D6R9N7 530 aa12.49□□□□□ -0.41
CDCA3-208ENST00000540683 USP17L22D6RA61 530 aa12.49□□□□□ -0.41
CDCA3-208ENST00000540683 USP17L17D6RBQ6 530 aa12.49□□□□□ -0.41
CDCA3-208ENST00000540683 USP17L19D6RCP7 530 aa12.49□□□□□ -0.41
CDCA3-208ENST00000540683 USP17L20D6RJB6 530 aa12.49□□□□□ -0.41
CDCA3-208ENST00000540683 GH2P01242 217 aa12.49□□□□□ -0.41
CDCA3-208ENST00000540683 GNAT2P19087 354 aa12.49□□□□□ -0.41
CDCA3-208ENST00000540683 MAPK4P31152 587 aa12.49□□□□□ -0.41
CDCA3-208ENST00000540683 USP17L24Q0WX57 530 aa12.49□□□□□ -0.41
CDCA3-208ENST00000540683 RAB3GAP1Q15042 981 aa12.49□□□□□ -0.41
CDCA3-208ENST00000540683 GIMAP6Q6P9H5 292 aa12.49□□□□□ -0.41
CDCA3-208ENST00000540683 TMEM179Q6ZVK1 233 aa12.49□□□□□ -0.41
CDCA3-208ENST00000540683 GPRC5AQ8NFJ5 357 aa12.49□□□□□ -0.41
CDCA3-208ENST00000540683 SOCS4Q8WXH5 440 aa12.49□□□□□ -0.41
CDCA3-208ENST00000540683 ARHGAP39Q9C0H5 1083 aa12.49□□□□□ -0.41
CDCA3-208ENST00000540683 KIAA1683Q9H0B3 1180 aa12.49□□□□□ -0.41
CDCA3-208ENST00000540683 MORF4L1Q9UBU8 362 aa12.49□□□□□ -0.41
CDCA3-208ENST00000540683 MYH7P12883 1935 aa12.49□□□□□ -0.41
CDCA3-208ENST00000540683 HTTP42858 3142 aa12.48□□□□□ -0.41
CDCA3-208ENST00000540683 TCRBV5S4A2TA0A5A2 114 aa12.48□□□□□ -0.41
CDCA3-208ENST00000540683 ADCY3O60266 1144 aa12.48□□□□□ -0.41
CDCA3-208ENST00000540683 GDF11O95390 407 aa12.48□□□□□ -0.41
CDCA3-208ENST00000540683 RRP1P56182 461 aaKnown RBP12.48□□□□□ -0.41
CDCA3-208ENST00000540683 TREML2Q5T2D2 321 aa12.48□□□□□ -0.41
CDCA3-208ENST00000540683 TICAM2Q86XR7 235 aa12.48□□□□□ -0.41
CDCA3-208ENST00000540683 C12orf42Q96LP6 360 aa12.48□□□□□ -0.41
CDCA3-208ENST00000540683 DNAJC18Q9H819 358 aa12.48□□□□□ -0.41
CDCA3-208ENST00000540683 ARHGEF10LQ9HCE6 1279 aa12.48□□□□□ -0.41
CDCA3-208ENST00000540683 DCP1AQ9NPI6 582 aaPredicted RBP12.48□□□□□ -0.41
CDCA3-208ENST00000540683 ARPP21Q9UBL0 812 aaPredicted RBP12.48□□□□□ -0.41
CDCA3-208ENST00000540683 NDUFB9Q9Y6M9 179 aa12.48□□□□□ -0.41
CDCA3-208ENST00000540683 KIAA0100Q14667 2235 aaKnown RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms