RNA–Protein interactions for RNA: ENST00000540491.1

SOD2-212, Transcript of superoxide dismutase 2, humanhuman

TSL 3

Gene SOD2, Length 454 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD2-212ENST00000540491 CYP7A1P22680 504 aa23.48■■□□□ 1.35
SOD2-212ENST00000540491 HNRNPUQ00839 825 aaKnown RBP eCLIP23.48■■□□□ 1.35
SOD2-212ENST00000540491 MAP3K12Q12852 859 aa23.48■■□□□ 1.35
SOD2-212ENST00000540491 ADGRA1Q86SQ6 560 aa23.48■■□□□ 1.35
SOD2-212ENST00000540491 TRMT44Q8IYL2 757 aaKnown RBP23.48■■□□□ 1.35
SOD2-212ENST00000540491 SOCS4Q8WXH5 440 aa23.48■■□□□ 1.35
SOD2-212ENST00000540491 DNAJC18Q9H819 358 aa23.48■■□□□ 1.35
SOD2-212ENST00000540491 XRCC5P13010 732 aaKnown RBP23.47■■□□□ 1.35
SOD2-212ENST00000540491 CHRDL2Q6WN34 429 aa23.47■■□□□ 1.35
SOD2-212ENST00000540491 GPRC5AQ8NFJ5 357 aa23.47■■□□□ 1.35
SOD2-212ENST00000540491 EAF2Q96CJ1 260 aaPredicted RBP23.47■■□□□ 1.35
SOD2-212ENST00000540491 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.47■■□□□ 1.35
SOD2-212ENST00000540491 EHD4Q9H223 541 aa23.47■■□□□ 1.35
SOD2-212ENST00000540491 HMX1Q9NP08 348 aaPredicted RBP23.47■■□□□ 1.35
SOD2-212ENST00000540491 PIH1D3Q9NQM4 214 aaKnown RBP23.47■■□□□ 1.35
SOD2-212ENST00000540491 ZBTB21Q9ULJ3 1066 aa23.47■■□□□ 1.35
SOD2-212ENST00000540491 RPTORQ8N122 1335 aa23.47■■□□□ 1.35
SOD2-212ENST00000540491 A0A1W2PPC1 479 aa23.46■■□□□ 1.35
SOD2-212ENST00000540491 EVI5O60447 810 aa23.46■■□□□ 1.35
SOD2-212ENST00000540491 IDH1O75874 414 aaKnown RBP23.46■■□□□ 1.35
SOD2-212ENST00000540491 MS4A1P11836 297 aa23.46■■□□□ 1.35
SOD2-212ENST00000540491 MAPK4P31152 587 aa23.46■■□□□ 1.35
SOD2-212ENST00000540491 MAST2Q6P0Q8 1798 aa23.46■■□□□ 1.35
SOD2-212ENST00000540491 NECAB2Q7Z6G3 386 aa23.46■■□□□ 1.35
SOD2-212ENST00000540491 TTC6Q86TZ1 520 aa23.46■■□□□ 1.35
SOD2-212ENST00000540491 CCDC8Q9H0W5 538 aaPredicted RBP23.46■■□□□ 1.35
SOD2-212ENST00000540491 TRIOBPQ9H2D6 2365 aa23.46■■□□□ 1.35
SOD2-212ENST00000540491 C1orf115Q9H7X2 142 aa23.46■■□□□ 1.35
SOD2-212ENST00000540491 HERVK_113P62684 666 aa23.45■■□□□ 1.34
SOD2-212ENST00000540491 TATDN1Q6P1N9 297 aa23.45■■□□□ 1.34
SOD2-212ENST00000540491 USP17L2Q6R6M4 530 aa23.45■■□□□ 1.34
SOD2-212ENST00000540491 P2RX7Q99572 595 aaKnown RBP23.45■■□□□ 1.34
SOD2-212ENST00000540491 NUDT12Q9BQG2 462 aa23.45■■□□□ 1.34
SOD2-212ENST00000540491 SERPINB13Q9UIV8 391 aa23.45■■□□□ 1.34
SOD2-212ENST00000540491 DOCK3Q8IZD9 2030 aa23.44■■□□□ 1.34
SOD2-212ENST00000540491 USP5P45974 858 aa23.44■■□□□ 1.34
SOD2-212ENST00000540491 TTF1Q15361 905 aaPredicted RBP23.44■■□□□ 1.34
SOD2-212ENST00000540491 CEP85Q6P2H3 762 aa23.44■■□□□ 1.34
SOD2-212ENST00000540491 RLBP1P12271 317 aa23.43■■□□□ 1.34
SOD2-212ENST00000540491 USP14P54578 494 aa23.43■■□□□ 1.34
SOD2-212ENST00000540491 PDE3AQ14432 1141 aa23.43■■□□□ 1.34
SOD2-212ENST00000540491 CCAR1Q8IX12 1150 aaKnown RBP23.43■■□□□ 1.34
SOD2-212ENST00000540491 C12orf42Q96LP6 360 aa23.43■■□□□ 1.34
SOD2-212ENST00000540491 PRO3102Q9H379 93 aa23.43■■□□□ 1.34
SOD2-212ENST00000540491 RBM27Q9P2N5 1060 aaKnown RBP23.43■■□□□ 1.34
SOD2-212ENST00000540491 ATAD5Q96QE3 1844 aa23.43■■□□□ 1.34
SOD2-212ENST00000540491 GDF11O95390 407 aa23.42■■□□□ 1.34
SOD2-212ENST00000540491 DYNLL1P63167 89 aaKnown RBP23.42■■□□□ 1.34
SOD2-212ENST00000540491 MAGEB6Q8N7X4 407 aa23.42■■□□□ 1.34
SOD2-212ENST00000540491 TLR7Q9NYK1 1049 aaKnown RBP23.42■■□□□ 1.34
SOD2-212ENST00000540491 SAP30BPQ9UHR5 308 aaKnown RBP23.42■■□□□ 1.34
SOD2-212ENST00000540491 JAG1P78504 1218 aa23.41■■□□□ 1.34
SOD2-212ENST00000540491 PAWRQ96IZ0 340 aaKnown RBP23.41■■□□□ 1.34
SOD2-212ENST00000540491 EMILIN3Q9NT22 766 aa23.41■■□□□ 1.34
SOD2-212ENST00000540491 RBPJLQ9UBG7 517 aa23.41■■□□□ 1.34
SOD2-212ENST00000540491 GH2P01242 217 aa23.4■■□□□ 1.34
SOD2-212ENST00000540491 ERVK-9P63128 1117 aa23.4■■□□□ 1.34
SOD2-212ENST00000540491 ERVK-24P63145 666 aa23.4■■□□□ 1.34
SOD2-212ENST00000540491 CCNA1P78396 465 aa23.4■■□□□ 1.34
SOD2-212ENST00000540491 AACSQ86V21 672 aa23.4■■□□□ 1.34
SOD2-212ENST00000540491 MIGA1Q8NAN2 632 aa23.4■■□□□ 1.34
SOD2-212ENST00000540491 NBPF3Q9H094 633 aa23.4■■□□□ 1.34
SOD2-212ENST00000540491 CABP5Q9NP86 173 aa23.4■■□□□ 1.34
SOD2-212ENST00000540491 FOCADQ5VW36 1801 aa23.39■■□□□ 1.33
SOD2-212ENST00000540491 USP17L15C9J2P7 530 aa23.39■■□□□ 1.33
SOD2-212ENST00000540491 USP17L13C9JLJ4 530 aa23.39■■□□□ 1.33
SOD2-212ENST00000540491 USP17L11C9JVI0 530 aa23.39■■□□□ 1.33
SOD2-212ENST00000540491 USP17L18D6R9N7 530 aa23.39■■□□□ 1.33
SOD2-212ENST00000540491 USP17L22D6RA61 530 aa23.39■■□□□ 1.33
SOD2-212ENST00000540491 USP17L17D6RBQ6 530 aa23.39■■□□□ 1.33
SOD2-212ENST00000540491 USP17L19D6RCP7 530 aa23.39■■□□□ 1.33
SOD2-212ENST00000540491 USP17L20D6RJB6 530 aa23.39■■□□□ 1.33
SOD2-212ENST00000540491 GLRX3O76003 335 aaKnown RBP23.39■■□□□ 1.33
SOD2-212ENST00000540491 USP17L24Q0WX57 530 aa23.39■■□□□ 1.33
SOD2-212ENST00000540491 CERKLQ49MI3 558 aaPredicted RBP23.39■■□□□ 1.33
SOD2-212ENST00000540491 MAP3K21Q5TCX8 1036 aa23.39■■□□□ 1.33
SOD2-212ENST00000540491 RPAP2Q8IXW5 612 aaPredicted RBP23.39■■□□□ 1.33
SOD2-212ENST00000540491 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.39■■□□□ 1.33
SOD2-212ENST00000540491 KIAA1683Q9H0B3 1180 aa23.39■■□□□ 1.33
SOD2-212ENST00000540491 TXNRD2Q9NNW7 524 aa23.39■■□□□ 1.33
SOD2-212ENST00000540491 RABGAP1Q9Y3P9 1069 aa23.39■■□□□ 1.33
SOD2-212ENST00000540491 SIPA1L1O43166 1804 aa23.38■■□□□ 1.33
SOD2-212ENST00000540491 ZBED9Q6R2W3 1325 aa23.38■■□□□ 1.33
SOD2-212ENST00000540491 RANBP2P49792 3224 aaKnown RBP23.38■■□□□ 1.33
SOD2-212ENST00000540491 CYP2B6P20813 491 aa23.38■■□□□ 1.33
SOD2-212ENST00000540491 RGS2P41220 211 aa23.38■■□□□ 1.33
SOD2-212ENST00000540491 CLASRPQ8N2M8 674 aaKnown RBP23.38■■□□□ 1.33
SOD2-212ENST00000540491 TRIB2Q92519 343 aa23.38■■□□□ 1.33
SOD2-212ENST00000540491 FEZ1Q99689 392 aa23.38■■□□□ 1.33
SOD2-212ENST00000540491 CHMP4BQ9H444 224 aaKnown RBP23.38■■□□□ 1.33
SOD2-212ENST00000540491 OGDHLQ9ULD0 1010 aa23.38■■□□□ 1.33
SOD2-212ENST00000540491 EXOC6BQ9Y2D4 811 aa23.38■■□□□ 1.33
SOD2-212ENST00000540491 HMMRO75330 724 aa23.37■■□□□ 1.33
SOD2-212ENST00000540491 ABCB5Q2M3G0 1257 aa23.37■■□□□ 1.33
SOD2-212ENST00000540491 LBX2Q6XYB7 198 aa23.37■■□□□ 1.33
SOD2-212ENST00000540491 PLEKHH3Q7Z736 793 aa23.37■■□□□ 1.33
SOD2-212ENST00000540491 RHPN1Q8TCX5 695 aa23.37■■□□□ 1.33
SOD2-212ENST00000540491 USP6NLQ92738 828 aa23.37■■□□□ 1.33
SOD2-212ENST00000540491 KIF1BPQ96EK5 621 aa23.37■■□□□ 1.33
SOD2-212ENST00000540491 ZKSCAN1P17029 563 aaPredicted RBP23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 168.4 ms