RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 EVI5O60447 810 aa14.68□□□□□ -0.06
CBX3P4-202ENST00000540428 HLA-DOAP06340 250 aa14.68□□□□□ -0.06
CBX3P4-202ENST00000540428 ZAP70P43403 619 aa14.68□□□□□ -0.06
CBX3P4-202ENST00000540428 FTSJ3Q8IY81 847 aaKnown RBP14.68□□□□□ -0.06
CBX3P4-202ENST00000540428 GTF3C2Q8WUA4 911 aaPredicted RBP14.68□□□□□ -0.06
CBX3P4-202ENST00000540428 HMX1Q9NP08 348 aaPredicted RBP14.68□□□□□ -0.06
CBX3P4-202ENST00000540428 DBNLQ9UJU6 430 aaKnown RBP14.68□□□□□ -0.06
CBX3P4-202ENST00000540428 PALD1Q9ULE6 856 aa14.68□□□□□ -0.06
CBX3P4-202ENST00000540428 ZBTB21Q9ULJ3 1066 aa14.68□□□□□ -0.06
CBX3P4-202ENST00000540428 TRIOBPQ9H2D6 2365 aa14.67□□□□□ -0.06
CBX3P4-202ENST00000540428 XRCC5P13010 732 aaKnown RBP14.67□□□□□ -0.06
CBX3P4-202ENST00000540428 HERVK_113P62684 666 aa14.67□□□□□ -0.06
CBX3P4-202ENST00000540428 JAG1P78504 1218 aa14.67□□□□□ -0.06
CBX3P4-202ENST00000540428 NECAB2Q7Z6G3 386 aa14.67□□□□□ -0.06
CBX3P4-202ENST00000540428 GPRC5AQ8NFJ5 357 aa14.67□□□□□ -0.06
CBX3P4-202ENST00000540428 SOCS4Q8WXH5 440 aa14.67□□□□□ -0.06
CBX3P4-202ENST00000540428 PAWRQ96IZ0 340 aaKnown RBP14.67□□□□□ -0.06
CBX3P4-202ENST00000540428 P2RX7Q99572 595 aaKnown RBP14.67□□□□□ -0.06
CBX3P4-202ENST00000540428 PIH1D3Q9NQM4 214 aaKnown RBP14.67□□□□□ -0.06
CBX3P4-202ENST00000540428 GDF11O95390 407 aa14.66□□□□□ -0.06
CBX3P4-202ENST00000540428 CYP7A1P22680 504 aa14.66□□□□□ -0.06
CBX3P4-202ENST00000540428 MAPK4P31152 587 aa14.66□□□□□ -0.06
CBX3P4-202ENST00000540428 TRMT44Q8IYL2 757 aaKnown RBP14.66□□□□□ -0.06
CBX3P4-202ENST00000540428 EAF2Q96CJ1 260 aaPredicted RBP14.66□□□□□ -0.06
CBX3P4-202ENST00000540428 NUDT12Q9BQG2 462 aa14.66□□□□□ -0.06
CBX3P4-202ENST00000540428 EHD4Q9H223 541 aa14.66□□□□□ -0.06
CBX3P4-202ENST00000540428 C1orf115Q9H7X2 142 aa14.66□□□□□ -0.06
CBX3P4-202ENST00000540428 SIPA1L1O43166 1804 aa14.66□□□□□ -0.06
CBX3P4-202ENST00000540428 ATAD5Q96QE3 1844 aa14.66□□□□□ -0.06
CBX3P4-202ENST00000540428 DYNLL1P63167 89 aaKnown RBP14.65□□□□□ -0.06
CBX3P4-202ENST00000540428 MAP3K21Q5TCX8 1036 aa14.65□□□□□ -0.06
CBX3P4-202ENST00000540428 TATDN1Q6P1N9 297 aa14.65□□□□□ -0.06
CBX3P4-202ENST00000540428 USP17L2Q6R6M4 530 aa14.65□□□□□ -0.06
CBX3P4-202ENST00000540428 ITPRIPQ8IWB1 547 aa14.65□□□□□ -0.06
CBX3P4-202ENST00000540428 TRIB2Q92519 343 aa14.65□□□□□ -0.06
CBX3P4-202ENST00000540428 CCDC8Q9H0W5 538 aaPredicted RBP14.65□□□□□ -0.06
CBX3P4-202ENST00000540428 TXNRD2Q9NNW7 524 aa14.65□□□□□ -0.06
CBX3P4-202ENST00000540428 TLR7Q9NYK1 1049 aaKnown RBP14.65□□□□□ -0.06
CBX3P4-202ENST00000540428 IDH1O75874 414 aaKnown RBP14.64□□□□□ -0.07
CBX3P4-202ENST00000540428 CYP2B6P20813 491 aa14.64□□□□□ -0.07
CBX3P4-202ENST00000540428 USP5P45974 858 aa14.64□□□□□ -0.07
CBX3P4-202ENST00000540428 MAP3K12Q12852 859 aa14.64□□□□□ -0.07
CBX3P4-202ENST00000540428 PDE3AQ14432 1141 aa14.64□□□□□ -0.07
CBX3P4-202ENST00000540428 ERC1Q8IUD2 1116 aa14.64□□□□□ -0.07
CBX3P4-202ENST00000540428 C12orf42Q96LP6 360 aa14.64□□□□□ -0.07
CBX3P4-202ENST00000540428 NBPF3Q9H094 633 aa14.64□□□□□ -0.07
CBX3P4-202ENST00000540428 EMILIN3Q9NT22 766 aa14.64□□□□□ -0.07
CBX3P4-202ENST00000540428 RBPJLQ9UBG7 517 aa14.64□□□□□ -0.07
CBX3P4-202ENST00000540428 SAP30BPQ9UHR5 308 aaKnown RBP14.64□□□□□ -0.07
CBX3P4-202ENST00000540428 SERPINB13Q9UIV8 391 aa14.64□□□□□ -0.07
CBX3P4-202ENST00000540428 OGDHLQ9ULD0 1010 aa14.64□□□□□ -0.07
CBX3P4-202ENST00000540428 DOCK3Q8IZD9 2030 aa14.64□□□□□ -0.07
CBX3P4-202ENST00000540428 GH2P01242 217 aa14.63□□□□□ -0.07
CBX3P4-202ENST00000540428 RLBP1P12271 317 aa14.63□□□□□ -0.07
CBX3P4-202ENST00000540428 ERVK-9P63128 1117 aa14.63□□□□□ -0.07
CBX3P4-202ENST00000540428 ERVK-24P63145 666 aa14.63□□□□□ -0.07
CBX3P4-202ENST00000540428 TRIM32Q13049 653 aa14.63□□□□□ -0.07
CBX3P4-202ENST00000540428 SHROOM1Q2M3G4 852 aaPredicted RBP14.63□□□□□ -0.07
CBX3P4-202ENST00000540428 CEP85Q6P2H3 762 aa14.63□□□□□ -0.07
CBX3P4-202ENST00000540428 TTC6Q86TZ1 520 aa14.63□□□□□ -0.07
CBX3P4-202ENST00000540428 MAGEB6Q8N7X4 407 aa14.63□□□□□ -0.07
CBX3P4-202ENST00000540428 DIS3LQ8TF46 1054 aaKnown RBP14.63□□□□□ -0.07
CBX3P4-202ENST00000540428 USP6NLQ92738 828 aa14.63□□□□□ -0.07
CBX3P4-202ENST00000540428 FOCADQ5VW36 1801 aa14.62□□□□□ -0.07
CBX3P4-202ENST00000540428 PRKAR2AP13861 404 aaKnown RBP14.62□□□□□ -0.07
CBX3P4-202ENST00000540428 MNX1P50219 401 aaPredicted RBP14.62□□□□□ -0.07
CBX3P4-202ENST00000540428 USP14P54578 494 aa14.62□□□□□ -0.07
CBX3P4-202ENST00000540428 Q3C1V9 767 aa14.62□□□□□ -0.07
CBX3P4-202ENST00000540428 HSP90AB4PQ58FF6 505 aa14.62□□□□□ -0.07
CBX3P4-202ENST00000540428 CCAR1Q8IX12 1150 aaKnown RBP14.62□□□□□ -0.07
CBX3P4-202ENST00000540428 MIGA1Q8NAN2 632 aa14.62□□□□□ -0.07
CBX3P4-202ENST00000540428 C11orf49Q9H6J7 331 aa14.62□□□□□ -0.07
CBX3P4-202ENST00000540428 RABGAP1Q9Y3P9 1069 aa14.62□□□□□ -0.07
CBX3P4-202ENST00000540428 USP17L15C9J2P7 530 aa14.61□□□□□ -0.07
CBX3P4-202ENST00000540428 USP17L13C9JLJ4 530 aa14.61□□□□□ -0.07
CBX3P4-202ENST00000540428 USP17L11C9JVI0 530 aa14.61□□□□□ -0.07
CBX3P4-202ENST00000540428 USP17L18D6R9N7 530 aa14.61□□□□□ -0.07
CBX3P4-202ENST00000540428 USP17L22D6RA61 530 aa14.61□□□□□ -0.07
CBX3P4-202ENST00000540428 USP17L17D6RBQ6 530 aa14.61□□□□□ -0.07
CBX3P4-202ENST00000540428 USP17L19D6RCP7 530 aa14.61□□□□□ -0.07
CBX3P4-202ENST00000540428 USP17L20D6RJB6 530 aa14.61□□□□□ -0.07
CBX3P4-202ENST00000540428 ZKSCAN1P17029 563 aaPredicted RBP14.61□□□□□ -0.07
CBX3P4-202ENST00000540428 BMP8BP34820 402 aa14.61□□□□□ -0.07
CBX3P4-202ENST00000540428 RGS2P41220 211 aa14.61□□□□□ -0.07
CBX3P4-202ENST00000540428 HNRNPUQ00839 825 aaKnown RBP eCLIP14.61□□□□□ -0.07
CBX3P4-202ENST00000540428 USP17L24Q0WX57 530 aa14.61□□□□□ -0.07
CBX3P4-202ENST00000540428 MORN1Q5T089 497 aa14.61□□□□□ -0.07
CBX3P4-202ENST00000540428 GPR142Q7Z601 462 aa14.61□□□□□ -0.07
CBX3P4-202ENST00000540428 PLEKHH3Q7Z736 793 aa14.61□□□□□ -0.07
CBX3P4-202ENST00000540428 FEZ1Q99689 392 aa14.61□□□□□ -0.07
CBX3P4-202ENST00000540428 KIAA1683Q9H0B3 1180 aa14.61□□□□□ -0.07
CBX3P4-202ENST00000540428 PORCNQ9H237 461 aa14.61□□□□□ -0.07
CBX3P4-202ENST00000540428 ANTXR1Q9H6X2 564 aa14.61□□□□□ -0.07
CBX3P4-202ENST00000540428 RANBP2P49792 3224 aaKnown RBP14.6□□□□□ -0.07
CBX3P4-202ENST00000540428 PEX10O60683 326 aa14.6□□□□□ -0.07
CBX3P4-202ENST00000540428 CCNA1P78396 465 aa14.6□□□□□ -0.07
CBX3P4-202ENST00000540428 TTF1Q15361 905 aaPredicted RBP14.6□□□□□ -0.07
CBX3P4-202ENST00000540428 ABCB5Q2M3G0 1257 aa14.6□□□□□ -0.07
CBX3P4-202ENST00000540428 CERKLQ49MI3 558 aaPredicted RBP14.6□□□□□ -0.07
CBX3P4-202ENST00000540428 POTEEQ6S8J3 1075 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms