RNA–Protein interactions for RNA: ENST00000540351.1

UBC-207, Transcript of ubiquitin C, humanhuman

TSL 1 (best)

Gene UBC, Length 622 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-207ENST00000540351 SEMA6BQ9H3T3 888 aa16.03■□□□□ 0.16
UBC-207ENST00000540351 ABCF2Q9UG63 623 aa16.03■□□□□ 0.16
UBC-207ENST00000540351 CDK5RAP2Q96SN8 1893 aa16.03■□□□□ 0.16
UBC-207ENST00000540351 NCOR1O75376 2440 aa16.02■□□□□ 0.16
UBC-207ENST00000540351 ZKSCAN1P17029 563 aaPredicted RBP16.02■□□□□ 0.16
UBC-207ENST00000540351 MAPK4P31152 587 aa16.02■□□□□ 0.16
UBC-207ENST00000540351 PI16Q6UXB8 463 aa16.02■□□□□ 0.16
UBC-207ENST00000540351 SLF2Q8IX21 1173 aa16.02■□□□□ 0.16
UBC-207ENST00000540351 APBA2Q99767 749 aa16.02■□□□□ 0.16
UBC-207ENST00000540351 HMG20BQ9P0W2 317 aa16.02■□□□□ 0.16
UBC-207ENST00000540351 HERC5Q9UII4 1024 aaKnown RBP16.02■□□□□ 0.16
UBC-207ENST00000540351 CHD9Q3L8U1 2897 aa16.01■□□□□ 0.15
UBC-207ENST00000540351 SHHQ15465 462 aa16.01■□□□□ 0.15
UBC-207ENST00000540351 C9orf50Q5SZB4 431 aa16.01■□□□□ 0.15
UBC-207ENST00000540351 TRPV1Q8NER1 839 aa16.01■□□□□ 0.15
UBC-207ENST00000540351 XAGE2Q96GT9 111 aa16.01■□□□□ 0.15
UBC-207ENST00000540351 EMILIN3Q9NT22 766 aa16.01■□□□□ 0.15
UBC-207ENST00000540351 FOCADQ5VW36 1801 aa16.01■□□□□ 0.15
UBC-207ENST00000540351 RGS2P41220 211 aa16■□□□□ 0.15
UBC-207ENST00000540351 IRX3P78415 501 aaPredicted RBP16■□□□□ 0.15
UBC-207ENST00000540351 SPTY2D1Q68D10 685 aaPredicted RBP16■□□□□ 0.15
UBC-207ENST00000540351 TBC1D9Q6ZT07 1266 aa16■□□□□ 0.15
UBC-207ENST00000540351 MAFAQ8NHW3 353 aaPredicted RBP16■□□□□ 0.15
UBC-207ENST00000540351 MRS2Q9HD23 443 aa16■□□□□ 0.15
UBC-207ENST00000540351 A0A1B0GUL7 405 aa15.99■□□□□ 0.15
UBC-207ENST00000540351 C19orf81C9J6K1 198 aa15.99■□□□□ 0.15
UBC-207ENST00000540351 HOXC6P09630 235 aa15.99■□□□□ 0.15
UBC-207ENST00000540351 MAP2K5Q13163 448 aa15.99■□□□□ 0.15
UBC-207ENST00000540351 SNX17Q15036 470 aa15.99■□□□□ 0.15
UBC-207ENST00000540351 ZNF697Q5TEC3 545 aa15.99■□□□□ 0.15
UBC-207ENST00000540351 ERICH6Q7L0X2 663 aa15.99■□□□□ 0.15
UBC-207ENST00000540351 PLEKHH3Q7Z736 793 aa15.99■□□□□ 0.15
UBC-207ENST00000540351 SENP6Q9GZR1 1112 aaPredicted RBP15.99■□□□□ 0.15
UBC-207ENST00000540351 AS3MTQ9HBK9 375 aa15.99■□□□□ 0.15
UBC-207ENST00000540351 ASNSP08243 561 aa15.98■□□□□ 0.15
UBC-207ENST00000540351 ARID4AP29374 1257 aaPredicted RBP15.98■□□□□ 0.15
UBC-207ENST00000540351 SH3RF3Q8TEJ3 882 aaPredicted RBP15.98■□□□□ 0.15
UBC-207ENST00000540351 LPAR1Q92633 364 aa15.98■□□□□ 0.15
UBC-207ENST00000540351 C12orf42Q96LP6 360 aa15.98■□□□□ 0.15
UBC-207ENST00000540351 PI4KBQ9UBF8 816 aa15.98■□□□□ 0.15
UBC-207ENST00000540351 DDX20Q9UHI6 824 aaKnown RBP15.98■□□□□ 0.15
UBC-207ENST00000540351 USP17L10C9JJH3 530 aa15.97■□□□□ 0.15
UBC-207ENST00000540351 DNM1LO00429 736 aa15.97■□□□□ 0.15
UBC-207ENST00000540351 RTP1P59025 263 aa15.97■□□□□ 0.15
UBC-207ENST00000540351 SMAD3P84022 425 aaKnown RBP15.97■□□□□ 0.15
UBC-207ENST00000540351 NPLOC4Q8TAT6 608 aa15.97■□□□□ 0.15
UBC-207ENST00000540351 MYLIPQ8WY64 445 aa15.97■□□□□ 0.15
UBC-207ENST00000540351 ZBTB21Q9ULJ3 1066 aa15.97■□□□□ 0.15
UBC-207ENST00000540351 CHD7Q9P2D1 2997 aa15.97■□□□□ 0.15
UBC-207ENST00000540351 BDP1A6H8Y1 2624 aa15.97■□□□□ 0.15
UBC-207ENST00000540351 UBTFL1P0CB47 393 aaPredicted RBP15.96■□□□□ 0.15
UBC-207ENST00000540351 CYBAP13498 195 aa15.96■□□□□ 0.15
UBC-207ENST00000540351 PTPREP23469 700 aa15.96■□□□□ 0.15
UBC-207ENST00000540351 ATN1P54259 1190 aaPredicted RBP15.96■□□□□ 0.15
UBC-207ENST00000540351 PPP4CP60510 307 aa15.96■□□□□ 0.15
UBC-207ENST00000540351 TFCP2Q12800 502 aa15.96■□□□□ 0.15
UBC-207ENST00000540351 PDE3AQ14432 1141 aa15.96■□□□□ 0.15
UBC-207ENST00000540351 GRB14Q14449 540 aa15.96■□□□□ 0.15
UBC-207ENST00000540351 LBX2Q6XYB7 198 aa15.96■□□□□ 0.15
UBC-207ENST00000540351 ADGRA1Q86SQ6 560 aa15.96■□□□□ 0.15
UBC-207ENST00000540351 SPATA5Q8NB90 893 aa15.96■□□□□ 0.15
UBC-207ENST00000540351 GTF3C2Q8WUA4 911 aaPredicted RBP15.96■□□□□ 0.15
UBC-207ENST00000540351 EDC3Q96F86 508 aaKnown RBP15.96■□□□□ 0.15
UBC-207ENST00000540351 GINM1Q9NU53 330 aa15.96■□□□□ 0.15
UBC-207ENST00000540351 TMOD4Q9NZQ9 345 aa15.96■□□□□ 0.15
UBC-207ENST00000540351 RABGAP1Q9Y3P9 1069 aa15.96■□□□□ 0.15
UBC-207ENST00000540351 REV3LO60673 3130 aa15.96■□□□□ 0.14
UBC-207ENST00000540351 TRIM43BA6NCK2 446 aa15.95■□□□□ 0.14
UBC-207ENST00000540351 LDHCP07864 332 aa15.95■□□□□ 0.14
UBC-207ENST00000540351 MCAMP43121 646 aa15.95■□□□□ 0.14
UBC-207ENST00000540351 MTX1Q13505 466 aa15.95■□□□□ 0.14
UBC-207ENST00000540351 MVPQ14764 893 aaKnown RBP15.95■□□□□ 0.14
UBC-207ENST00000540351 TEX11Q8IYF3 940 aa15.95■□□□□ 0.14
UBC-207ENST00000540351 TRIM43Q96BQ3 446 aaPredicted RBP15.95■□□□□ 0.14
UBC-207ENST00000540351 LBHD1Q9BQE6 289 aaPredicted RBP15.95■□□□□ 0.14
UBC-207ENST00000540351 DHX36Q9H2U1 1008 aaKnown RBP15.95■□□□□ 0.14
UBC-207ENST00000540351 BTBD7Q9P203 1132 aa15.95■□□□□ 0.14
UBC-207ENST00000540351 ZNF236Q9UL36 1845 aa15.95■□□□□ 0.14
UBC-207ENST00000540351 FLT1P17948 1338 aa15.94■□□□□ 0.14
UBC-207ENST00000540351 SLC15A5A6NIM6 579 aa15.94■□□□□ 0.14
UBC-207ENST00000540351 GDF11O95390 407 aa15.94■□□□□ 0.14
UBC-207ENST00000540351 ITGB8P26012 769 aa15.94■□□□□ 0.14
UBC-207ENST00000540351 GSTO1P78417 241 aa15.94■□□□□ 0.14
UBC-207ENST00000540351 SLC39A5Q6ZMH5 540 aa15.94■□□□□ 0.14
UBC-207ENST00000540351 SH3RF1Q7Z6J0 888 aa15.94■□□□□ 0.14
UBC-207ENST00000540351 FOXP4Q8IVH2 680 aaPredicted RBP15.94■□□□□ 0.14
UBC-207ENST00000540351 USP38Q8NB14 1042 aa15.94■□□□□ 0.14
UBC-207ENST00000540351 MEIS3Q99687 375 aa15.94■□□□□ 0.14
UBC-207ENST00000540351 PAGR1Q9BTK6 254 aa15.94■□□□□ 0.14
UBC-207ENST00000540351 PDLIM7Q9NR12 457 aa15.94■□□□□ 0.14
UBC-207ENST00000540351 MYO5AQ9Y4I1 1855 aaKnown RBP15.94■□□□□ 0.14
UBC-207ENST00000540351 XIRP2A4UGR9 3374 aa15.93■□□□□ 0.14
UBC-207ENST00000540351 MSCO60682 206 aa15.93■□□□□ 0.14
UBC-207ENST00000540351 CYP2C19P33261 490 aa15.93■□□□□ 0.14
UBC-207ENST00000540351 EPHB4P54760 987 aa15.93■□□□□ 0.14
UBC-207ENST00000540351 ALDH1L2Q3SY69 923 aa15.93■□□□□ 0.14
UBC-207ENST00000540351 C1orf53Q5VUE5 145 aa15.93■□□□□ 0.14
UBC-207ENST00000540351 BADQ92934 168 aa15.93■□□□□ 0.14
UBC-207ENST00000540351 NDUFB9Q9Y6M9 179 aa15.93■□□□□ 0.14
UBC-207ENST00000540351 GJC2Q5T442 439 aaPredicted RBP15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms