RNA–Protein interactions for RNA: ENST00000539960.1

PRPF19-204, Transcript of pre-mRNA processing factor 19, humanhuman

TSL 2

Gene PRPF19, Length 796 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-204ENST00000539960 ALDH1A1P00352 501 aa16.07■□□□□ 0.16
PRPF19-204ENST00000539960 CCL15Q16663 113 aa16.07■□□□□ 0.16
PRPF19-204ENST00000539960 OTUD7BQ6GQQ9 843 aa16.07■□□□□ 0.16
PRPF19-204ENST00000539960 EPB41L4AQ9HCS5 686 aaPredicted RBP16.07■□□□□ 0.16
PRPF19-204ENST00000539960 DIAPH3Q9NSV4 1193 aa16.07■□□□□ 0.16
PRPF19-204ENST00000539960 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.07■□□□□ 0.16
PRPF19-204ENST00000539960 ARPP21Q9UBL0 812 aaPredicted RBP16.07■□□□□ 0.16
PRPF19-204ENST00000539960 OTOFQ9HC10 1997 aa16.06■□□□□ 0.16
PRPF19-204ENST00000539960 SMIM22K7EJ46 135 aa16.06■□□□□ 0.16
PRPF19-204ENST00000539960 IGF2BP3O00425 579 aaKnown RBP eCLIP16.06■□□□□ 0.16
PRPF19-204ENST00000539960 GDF11O95390 407 aa16.06■□□□□ 0.16
PRPF19-204ENST00000539960 HSPA8P11142 646 aaKnown RBP16.06■□□□□ 0.16
PRPF19-204ENST00000539960 CCDC84Q86UT8 332 aaPredicted RBP16.06■□□□□ 0.16
PRPF19-204ENST00000539960 TBC1D2Q9BYX2 928 aa16.06■□□□□ 0.16
PRPF19-204ENST00000539960 SWAP70Q9UH65 585 aa16.06■□□□□ 0.16
PRPF19-204ENST00000539960 TSKSQ9UJT2 592 aa16.06■□□□□ 0.16
PRPF19-204ENST00000539960 MINDY4BA8MYZ0 360 aa16.05■□□□□ 0.16
PRPF19-204ENST00000539960 FOXP2O15409 715 aa16.05■□□□□ 0.16
PRPF19-204ENST00000539960 GH2P01242 217 aa16.05■□□□□ 0.16
PRPF19-204ENST00000539960 TDO2P48775 406 aa16.05■□□□□ 0.16
PRPF19-204ENST00000539960 CDK8P49336 464 aa16.05■□□□□ 0.16
PRPF19-204ENST00000539960 LBX1P52954 281 aa16.05■□□□□ 0.16
PRPF19-204ENST00000539960 SPP2Q13103 211 aa16.05■□□□□ 0.16
PRPF19-204ENST00000539960 ALX1Q15699 326 aa16.05■□□□□ 0.16
PRPF19-204ENST00000539960 ABCB5Q2M3G0 1257 aa16.05■□□□□ 0.16
PRPF19-204ENST00000539960 SHROOM1Q2M3G4 852 aaPredicted RBP16.05■□□□□ 0.16
PRPF19-204ENST00000539960 CWC27Q6UX04 472 aaKnown RBP16.05■□□□□ 0.16
PRPF19-204ENST00000539960 C16orf86Q6ZW13 317 aa16.05■□□□□ 0.16
PRPF19-204ENST00000539960 SLC44A5Q8NCS7 719 aa16.05■□□□□ 0.16
PRPF19-204ENST00000539960 ZNF280CQ8ND82 737 aa16.05■□□□□ 0.16
PRPF19-204ENST00000539960 WDR18Q9BV38 432 aa16.05■□□□□ 0.16
PRPF19-204ENST00000539960 CABP5Q9NP86 173 aa16.05■□□□□ 0.16
PRPF19-204ENST00000539960 ZBTB21Q9ULJ3 1066 aa16.05■□□□□ 0.16
PRPF19-204ENST00000539960 MYH1P12882 1939 aa16.05■□□□□ 0.16
PRPF19-204ENST00000539960 TRIM75PA6NK02 468 aa16.04■□□□□ 0.16
PRPF19-204ENST00000539960 TBC1D8O95759 1140 aa16.04■□□□□ 0.16
PRPF19-204ENST00000539960 MFAP1P55081 439 aaKnown RBP16.04■□□□□ 0.16
PRPF19-204ENST00000539960 MOGSQ13724 837 aa16.04■□□□□ 0.16
PRPF19-204ENST00000539960 VPS53Q5VIR6 699 aa16.04■□□□□ 0.16
PRPF19-204ENST00000539960 FASTKD5Q7L8L6 764 aaKnown RBP16.04■□□□□ 0.16
PRPF19-204ENST00000539960 ZNF589Q86UQ0 364 aaPredicted RBP16.04■□□□□ 0.16
PRPF19-204ENST00000539960 SKAP1Q86WV1 359 aa16.04■□□□□ 0.16
PRPF19-204ENST00000539960 CFHR5Q9BXR6 569 aa16.04■□□□□ 0.16
PRPF19-204ENST00000539960 NAPBQ9H115 298 aa16.04■□□□□ 0.16
PRPF19-204ENST00000539960 AS3MTQ9HBK9 375 aa16.04■□□□□ 0.16
PRPF19-204ENST00000539960 SIPA1L1O43166 1804 aa16.03■□□□□ 0.16
PRPF19-204ENST00000539960 CCDC171Q6TFL3 1326 aa16.03■□□□□ 0.16
PRPF19-204ENST00000539960 A0A0G2JLL6 359 aaPredicted RBP16.03■□□□□ 0.16
PRPF19-204ENST00000539960 BTBD19C9JJ37 291 aa16.03■□□□□ 0.16
PRPF19-204ENST00000539960 PRRT2Q7Z6L0 340 aaPredicted RBP16.03■□□□□ 0.16
PRPF19-204ENST00000539960 FAM43AQ8N2R8 423 aa16.03■□□□□ 0.16
PRPF19-204ENST00000539960 CCDC17Q96LX7 622 aa16.03■□□□□ 0.16
PRPF19-204ENST00000539960 PRDM10Q9NQV6 1147 aa16.03■□□□□ 0.16
PRPF19-204ENST00000539960 FGAP02671 866 aa16.02■□□□□ 0.16
PRPF19-204ENST00000539960 HSPD1P10809 573 aaKnown RBP16.02■□□□□ 0.16
PRPF19-204ENST00000539960 CHMLP26374 656 aa16.02■□□□□ 0.16
PRPF19-204ENST00000539960 GUCY1A2P33402 732 aa16.02■□□□□ 0.16
PRPF19-204ENST00000539960 GPAT2Q6NUI2 795 aa16.02■□□□□ 0.16
PRPF19-204ENST00000539960 ANKRD23Q86SG2 305 aa16.02■□□□□ 0.16
PRPF19-204ENST00000539960 R3HDMLQ9H3Y0 253 aa16.02■□□□□ 0.16
PRPF19-204ENST00000539960 ZCCHC17Q9NP64 241 aaKnown RBP16.02■□□□□ 0.16
PRPF19-204ENST00000539960 C19orf81C9J6K1 198 aa16.01■□□□□ 0.15
PRPF19-204ENST00000539960 MPHOSPH10O00566 681 aaKnown RBP16.01■□□□□ 0.15
PRPF19-204ENST00000539960 BACE1P56817 501 aa16.01■□□□□ 0.15
PRPF19-204ENST00000539960 PPARAQ07869 468 aa16.01■□□□□ 0.15
PRPF19-204ENST00000539960 SEPT2Q15019 361 aa16.01■□□□□ 0.15
PRPF19-204ENST00000539960 RAB3GAP1Q15042 981 aa16.01■□□□□ 0.15
PRPF19-204ENST00000539960 STK11IPQ8N1F8 1099 aa16.01■□□□□ 0.15
PRPF19-204ENST00000539960 MKNK2Q9HBH9 465 aa16.01■□□□□ 0.15
PRPF19-204ENST00000539960 DDX60LQ5H9U9 1706 aaKnown RBP16■□□□□ 0.15
PRPF19-204ENST00000539960 NAV1Q8NEY1 1877 aa16■□□□□ 0.15
PRPF19-204ENST00000539960 USP17L10C9JJH3 530 aa16■□□□□ 0.15
PRPF19-204ENST00000539960 PDHXO00330 501 aa16■□□□□ 0.15
PRPF19-204ENST00000539960 SLC3A2P08195 630 aaKnown RBP16■□□□□ 0.15
PRPF19-204ENST00000539960 AKR1B1P15121 316 aa16■□□□□ 0.15
PRPF19-204ENST00000539960 TAF1CQ15572 869 aaPredicted RBP16■□□□□ 0.15
PRPF19-204ENST00000539960 NOM1Q5C9Z4 860 aaKnown RBP16■□□□□ 0.15
PRPF19-204ENST00000539960 BMP2KLQ5H9B9 411 aa16■□□□□ 0.15
PRPF19-204ENST00000539960 SH3D19Q5HYK7 790 aa16■□□□□ 0.15
PRPF19-204ENST00000539960 GADL1Q6ZQY3 521 aa16■□□□□ 0.15
PRPF19-204ENST00000539960 TMEM179Q6ZVK1 233 aa16■□□□□ 0.15
PRPF19-204ENST00000539960 RUFY2Q8WXA3 655 aa16■□□□□ 0.15
PRPF19-204ENST00000539960 ZNF287Q9HBT7 754 aa16■□□□□ 0.15
PRPF19-204ENST00000539960 ZFYVE28Q9HCC9 887 aa16■□□□□ 0.15
PRPF19-204ENST00000539960 GPR25O00155 361 aa15.99■□□□□ 0.15
PRPF19-204ENST00000539960 RASA1P20936 1047 aa15.99■□□□□ 0.15
PRPF19-204ENST00000539960 HMGCS2P54868 508 aa15.99■□□□□ 0.15
PRPF19-204ENST00000539960 PDE4BQ07343 736 aa15.99■□□□□ 0.15
PRPF19-204ENST00000539960 CRHR2Q13324 411 aa15.99■□□□□ 0.15
PRPF19-204ENST00000539960 MTMR2Q13614 643 aa15.99■□□□□ 0.15
PRPF19-204ENST00000539960 ZNF444Q8N0Y2 327 aaPredicted RBP15.99■□□□□ 0.15
PRPF19-204ENST00000539960 PROCA1Q8NCQ7 364 aaPredicted RBP15.99■□□□□ 0.15
PRPF19-204ENST00000539960 ANAPC4Q9UJX5 808 aa15.99■□□□□ 0.15
PRPF19-204ENST00000539960 BAZ2AQ9UIF9 1905 aaKnown RBP15.99■□□□□ 0.15
PRPF19-204ENST00000539960 DOCK1Q14185 1865 aa15.99■□□□□ 0.15
PRPF19-204ENST00000539960 ROBO3Q96MS0 1386 aa15.99■□□□□ 0.15
PRPF19-204ENST00000539960 USP17L2Q6R6M4 530 aa15.98■□□□□ 0.15
PRPF19-204ENST00000539960 SIAH1Q8IUQ4 282 aa15.98■□□□□ 0.15
PRPF19-204ENST00000539960 ACER1Q8TDN7 264 aa15.98■□□□□ 0.15
PRPF19-204ENST00000539960 DSCC1Q9BVC3 393 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms