RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 PLCB1Q9NQ66 1216 aa7.22□□□□□ -1.25
LSAMP-207ENST00000539563 CTSWP56202 376 aa7.22□□□□□ -1.25
LSAMP-207ENST00000539563 FANCCQ00597 558 aa7.22□□□□□ -1.25
LSAMP-207ENST00000539563 JAG2Q9Y219 1238 aa7.22□□□□□ -1.25
LSAMP-207ENST00000539563 KDM2BQ8NHM5 1336 aa7.22□□□□□ -1.25
LSAMP-207ENST00000539563 ZNF532Q9HCE3 1301 aa7.22□□□□□ -1.25
LSAMP-207ENST00000539563 ATP2C2O75185 946 aa7.22□□□□□ -1.25
LSAMP-207ENST00000539563 PCP11498 1178 aaKnown RBP7.22□□□□□ -1.25
LSAMP-207ENST00000539563 NCAPH2Q6IBW4 605 aa7.22□□□□□ -1.25
LSAMP-207ENST00000539563 AFAP1L2Q8N4X5 818 aa7.22□□□□□ -1.25
LSAMP-207ENST00000539563 FAM227BQ96M60 508 aa7.22□□□□□ -1.25
LSAMP-207ENST00000539563 NT5C3AQ9H0P0 336 aa7.22□□□□□ -1.25
LSAMP-207ENST00000539563 KRT9P35527 623 aa7.22□□□□□ -1.25
LSAMP-207ENST00000539563 EVCP57679 992 aa7.22□□□□□ -1.25
LSAMP-207ENST00000539563 ZNF445P59923 1031 aa7.22□□□□□ -1.25
LSAMP-207ENST00000539563 STIM2Q9P246 746 aa7.22□□□□□ -1.25
LSAMP-207ENST00000539563 DAPK3O43293 454 aa7.22□□□□□ -1.25
LSAMP-207ENST00000539563 GCNT3O95395 438 aa7.22□□□□□ -1.25
LSAMP-207ENST00000539563 SLC1A4P43007 532 aa7.22□□□□□ -1.25
LSAMP-207ENST00000539563 TAOK1Q7L7X3 1001 aa7.22□□□□□ -1.25
LSAMP-207ENST00000539563 OGFRQ9NZT2 677 aa7.22□□□□□ -1.25
LSAMP-207ENST00000539563 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.22□□□□□ -1.25
LSAMP-207ENST00000539563 A1BGP04217 495 aa7.21□□□□□ -1.25
LSAMP-207ENST00000539563 SP4Q02446 784 aa7.21□□□□□ -1.25
LSAMP-207ENST00000539563 INTS8Q75QN2 995 aaKnown RBP7.21□□□□□ -1.25
LSAMP-207ENST00000539563 SMC1BQ8NDV3 1235 aa7.21□□□□□ -1.25
LSAMP-207ENST00000539563 SNX29Q8TEQ0 813 aa7.21□□□□□ -1.25
LSAMP-207ENST00000539563 ZNF274Q96GC6 653 aaPredicted RBP7.21□□□□□ -1.25
LSAMP-207ENST00000539563 PARP2Q9UGN5 583 aa7.21□□□□□ -1.25
LSAMP-207ENST00000539563 ITIH3Q06033 890 aa7.21□□□□□ -1.25
LSAMP-207ENST00000539563 CABP7Q86V35 215 aa7.21□□□□□ -1.25
LSAMP-207ENST00000539563 DIS3L2Q8IYB7 885 aaKnown RBP7.21□□□□□ -1.25
LSAMP-207ENST00000539563 VPS52Q8N1B4 723 aa7.21□□□□□ -1.25
LSAMP-207ENST00000539563 ZNF594Q96JF6 807 aaPredicted RBP7.21□□□□□ -1.25
LSAMP-207ENST00000539563 MRPL44Q9H9J2 332 aaKnown RBP7.21□□□□□ -1.25
LSAMP-207ENST00000539563 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.21□□□□□ -1.25
LSAMP-207ENST00000539563 USP19O94966 1318 aa7.21□□□□□ -1.26
LSAMP-207ENST00000539563 ZEB2O60315 1214 aa7.21□□□□□ -1.26
LSAMP-207ENST00000539563 IVNS1ABPQ9Y6Y0 642 aa7.21□□□□□ -1.26
LSAMP-207ENST00000539563 CLASP1Q7Z460 1538 aa7.21□□□□□ -1.26
LSAMP-207ENST00000539563 TLDC2A0PJX2 215 aa7.21□□□□□ -1.26
LSAMP-207ENST00000539563 P4HA1P13674 534 aa7.21□□□□□ -1.26
LSAMP-207ENST00000539563 YWHAEP62258 255 aaKnown RBP7.21□□□□□ -1.26
LSAMP-207ENST00000539563 CCDC84Q86UT8 332 aaPredicted RBP7.21□□□□□ -1.26
LSAMP-207ENST00000539563 MYCT1Q8N699 235 aa7.21□□□□□ -1.26
LSAMP-207ENST00000539563 KDRP35968 1356 aa7.21□□□□□ -1.26
LSAMP-207ENST00000539563 NEO1Q92859 1461 aa7.21□□□□□ -1.26
LSAMP-207ENST00000539563 MLH3Q9UHC1 1453 aa7.21□□□□□ -1.26
LSAMP-207ENST00000539563 NEURL1BA8MQ27 555 aa7.21□□□□□ -1.26
LSAMP-207ENST00000539563 GALNT17Q6IS24 598 aa7.21□□□□□ -1.26
LSAMP-207ENST00000539563 C8orf74Q6P047 294 aa7.21□□□□□ -1.26
LSAMP-207ENST00000539563 AS3MTQ9HBK9 375 aa7.21□□□□□ -1.26
LSAMP-207ENST00000539563 MKRN1Q9UHC7 482 aaKnown RBP7.21□□□□□ -1.26
LSAMP-207ENST00000539563 MYOM2P54296 1465 aa7.21□□□□□ -1.26
LSAMP-207ENST00000539563 SMIM23A6NLE4 172 aa7.21□□□□□ -1.26
LSAMP-207ENST00000539563 MYCLP12524 364 aaPredicted RBP7.21□□□□□ -1.26
LSAMP-207ENST00000539563 FYB2Q5VWT5 728 aa7.21□□□□□ -1.26
LSAMP-207ENST00000539563 KDM5DQ9BY66 1539 aa7.21□□□□□ -1.26
LSAMP-207ENST00000539563 FAM135BQ49AJ0 1406 aa7.21□□□□□ -1.26
LSAMP-207ENST00000539563 E7EWF7 191 aa7.21□□□□□ -1.26
LSAMP-207ENST00000539563 LACTBP83111 547 aaPredicted RBP7.21□□□□□ -1.26
LSAMP-207ENST00000539563 RUFY4Q6ZNE9 571 aa7.21□□□□□ -1.26
LSAMP-207ENST00000539563 ZNF365Q70YC5 407 aa7.21□□□□□ -1.26
LSAMP-207ENST00000539563 MICALL1Q8N3F8 863 aa7.21□□□□□ -1.26
LSAMP-207ENST00000539563 CHURC1Q8WUH1 139 aa7.21□□□□□ -1.26
LSAMP-207ENST00000539563 TEKT1Q969V4 418 aa7.21□□□□□ -1.26
LSAMP-207ENST00000539563 AZI2Q9H6S1 392 aa7.21□□□□□ -1.26
LSAMP-207ENST00000539563 CBX8Q9HC52 389 aa7.21□□□□□ -1.26
LSAMP-207ENST00000539563 PTPRTO14522 1441 aa7.2□□□□□ -1.26
LSAMP-207ENST00000539563 NOL3O60936 208 aaKnown RBP7.2□□□□□ -1.26
LSAMP-207ENST00000539563 FLOT1O75955 427 aa7.2□□□□□ -1.26
LSAMP-207ENST00000539563 EIF4A1P60842 406 aaKnown RBP7.2□□□□□ -1.26
LSAMP-207ENST00000539563 CCDC125Q86Z20 511 aa7.2□□□□□ -1.26
LSAMP-207ENST00000539563 FLAD1Q8NFF5 587 aa7.2□□□□□ -1.26
LSAMP-207ENST00000539563 NELFBQ8WX92 580 aa7.2□□□□□ -1.26
LSAMP-207ENST00000539563 FEZ2Q9UHY8 353 aaPredicted RBP7.2□□□□□ -1.26
LSAMP-207ENST00000539563 PNMA2Q9UL42 364 aa7.2□□□□□ -1.26
LSAMP-207ENST00000539563 DISP1Q96F81 1524 aa7.2□□□□□ -1.26
LSAMP-207ENST00000539563 SEC24BO95487 1268 aa7.2□□□□□ -1.26
LSAMP-207ENST00000539563 ATP2B4P23634 1241 aa7.2□□□□□ -1.26
LSAMP-207ENST00000539563 ZNF75DP51815 510 aa7.2□□□□□ -1.26
LSAMP-207ENST00000539563 SRGAP1Q7Z6B7 1085 aa7.2□□□□□ -1.26
LSAMP-207ENST00000539563 RNF34Q969K3 372 aa7.2□□□□□ -1.26
LSAMP-207ENST00000539563 TRERF1Q96PN7 1200 aa7.2□□□□□ -1.26
LSAMP-207ENST00000539563 LGR6Q9HBX8 967 aa7.2□□□□□ -1.26
LSAMP-207ENST00000539563 CHMP2AO43633 222 aa7.2□□□□□ -1.26
LSAMP-207ENST00000539563 TCIRG1Q13488 830 aa7.2□□□□□ -1.26
LSAMP-207ENST00000539563 SLFN12Q8IYM2 578 aa7.2□□□□□ -1.26
LSAMP-207ENST00000539563 ZBTB38Q8NAP3 1195 aaPredicted RBP7.2□□□□□ -1.26
LSAMP-207ENST00000539563 TBC1D31Q96DN5 1066 aa7.2□□□□□ -1.26
LSAMP-207ENST00000539563 FAM184BQ9ULE4 1060 aa7.2□□□□□ -1.26
LSAMP-207ENST00000539563 CEP170Q5SW79 1584 aa7.2□□□□□ -1.26
LSAMP-207ENST00000539563 CIB2O75838 187 aa7.2□□□□□ -1.26
LSAMP-207ENST00000539563 ZAP70P43403 619 aa7.2□□□□□ -1.26
LSAMP-207ENST00000539563 TERF1P54274 439 aa7.2□□□□□ -1.26
LSAMP-207ENST00000539563 HERC4Q5GLZ8 1057 aaPredicted RBP7.2□□□□□ -1.26
LSAMP-207ENST00000539563 AFAP1L1Q8TED9 768 aa7.2□□□□□ -1.26
LSAMP-207ENST00000539563 SECISBP2LQ93073 1101 aaKnown RBP7.2□□□□□ -1.26
LSAMP-207ENST00000539563 CCDC51Q96ER9 411 aa7.2□□□□□ -1.26
LSAMP-207ENST00000539563 ATP8A2Q9NTI2 1148 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms