RNA–Protein interactions for RNA: ENST00000539232.1

LMO3-220, Transcript of LIM domain only 3, humanhuman

TSL 5

Gene LMO3, Length 580 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-220ENST00000539232 ERO1BQ86YB8 467 aa8.8□□□□□ -1
LMO3-220ENST00000539232 LCORLQ8N3X6 602 aa8.8□□□□□ -1
LMO3-220ENST00000539232 MAFAQ8NHW3 353 aaPredicted RBP8.8□□□□□ -1
LMO3-220ENST00000539232 CSADQ9Y600 493 aa8.8□□□□□ -1
LMO3-220ENST00000539232 ZNF532Q9HCE3 1301 aa8.8□□□□□ -1
LMO3-220ENST00000539232 CYP2D7A0A087X1C5 515 aa8.79□□□□□ -1
LMO3-220ENST00000539232 UNCXA6NJT0 531 aa8.79□□□□□ -1
LMO3-220ENST00000539232 PEX10O60683 326 aa8.79□□□□□ -1
LMO3-220ENST00000539232 CAPN2P17655 700 aa8.79□□□□□ -1
LMO3-220ENST00000539232 PPIL2Q13356 520 aa8.79□□□□□ -1
LMO3-220ENST00000539232 DCAF15Q66K64 600 aa8.79□□□□□ -1
LMO3-220ENST00000539232 SLF2Q8IX21 1173 aa8.79□□□□□ -1
LMO3-220ENST00000539232 ARHGAP39Q9C0H5 1083 aa8.79□□□□□ -1
LMO3-220ENST00000539232 ARMT1Q9H993 441 aa8.79□□□□□ -1
LMO3-220ENST00000539232 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.79□□□□□ -1
LMO3-220ENST00000539232 PAG1Q9NWQ8 432 aa8.79□□□□□ -1
LMO3-220ENST00000539232 KCNH4Q9UQ05 1017 aa8.79□□□□□ -1
LMO3-220ENST00000539232 ZHX2Q9Y6X8 837 aa8.79□□□□□ -1
LMO3-220ENST00000539232 ALPK3Q96L96 1907 aa8.79□□□□□ -1
LMO3-220ENST00000539232 SALL3Q9BXA9 1300 aa8.79□□□□□ -1
LMO3-220ENST00000539232 ARAP2Q8WZ64 1704 aa8.78□□□□□ -1
LMO3-220ENST00000539232 TRIM75PA6NK02 468 aa8.78□□□□□ -1
LMO3-220ENST00000539232 NPM3O75607 178 aaKnown RBP8.78□□□□□ -1
LMO3-220ENST00000539232 GDF11O95390 407 aa8.78□□□□□ -1
LMO3-220ENST00000539232 CTGFP29279 349 aa8.78□□□□□ -1
LMO3-220ENST00000539232 ADD2P35612 726 aa8.78□□□□□ -1
LMO3-220ENST00000539232 PLCD1P51178 756 aa8.78□□□□□ -1
LMO3-220ENST00000539232 KIF22Q14807 665 aa8.78□□□□□ -1
LMO3-220ENST00000539232 TJAP1Q5JTD0 557 aa8.78□□□□□ -1
LMO3-220ENST00000539232 METTL16Q86W50 562 aaKnown RBP8.78□□□□□ -1
LMO3-220ENST00000539232 SCYL3Q8IZE3 742 aa8.78□□□□□ -1
LMO3-220ENST00000539232 SLC44A5Q8NCS7 719 aa8.78□□□□□ -1
LMO3-220ENST00000539232 PI4K2BQ8TCG2 481 aa8.78□□□□□ -1
LMO3-220ENST00000539232 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.78□□□□□ -1
LMO3-220ENST00000539232 SDR42E1Q8WUS8 393 aa8.78□□□□□ -1
LMO3-220ENST00000539232 PUS7LQ9H0K6 701 aaKnown RBP8.78□□□□□ -1
LMO3-220ENST00000539232 CHMP4BQ9H444 224 aaKnown RBP8.78□□□□□ -1
LMO3-220ENST00000539232 ECHDC1Q9NTX5 307 aa8.78□□□□□ -1
LMO3-220ENST00000539232 AFG3L2Q9Y4W6 797 aa8.78□□□□□ -1
LMO3-220ENST00000539232 MAGEB6P1A0A0J9YX57 407 aa8.77□□□□□ -1.01
LMO3-220ENST00000539232 TBC1D12O60347 775 aa8.77□□□□□ -1.01
LMO3-220ENST00000539232 CTNND1O60716 968 aaKnown RBP8.77□□□□□ -1.01
LMO3-220ENST00000539232 MBD4O95243 580 aa8.77□□□□□ -1.01
LMO3-220ENST00000539232 BAG3O95817 575 aa8.77□□□□□ -1.01
LMO3-220ENST00000539232 CYP2C8P10632 490 aa8.77□□□□□ -1.01
LMO3-220ENST00000539232 CCL5P13501 91 aa8.77□□□□□ -1.01
LMO3-220ENST00000539232 GTF2A2P52657 109 aa8.77□□□□□ -1.01
LMO3-220ENST00000539232 PPATQ06203 517 aa8.77□□□□□ -1.01
LMO3-220ENST00000539232 SNAPC2Q13487 334 aa8.77□□□□□ -1.01
LMO3-220ENST00000539232 TREML2Q5T2D2 321 aa8.77□□□□□ -1.01
LMO3-220ENST00000539232 U2AF1L4Q8WU68 220 aaKnown RBP8.77□□□□□ -1.01
LMO3-220ENST00000539232 OSBP2Q969R2 916 aa8.77□□□□□ -1.01
LMO3-220ENST00000539232 DYNLL2Q96FJ2 89 aa8.77□□□□□ -1.01
LMO3-220ENST00000539232 SEC62Q99442 399 aaKnown RBP8.77□□□□□ -1.01
LMO3-220ENST00000539232 RNF208Q9H0X6 261 aa8.77□□□□□ -1.01
LMO3-220ENST00000539232 ZFYVE28Q9HCC9 887 aa8.77□□□□□ -1.01
LMO3-220ENST00000539232 BDP1A6H8Y1 2624 aa8.76□□□□□ -1.01
LMO3-220ENST00000539232 PDHXO00330 501 aa8.76□□□□□ -1.01
LMO3-220ENST00000539232 CETPP11597 493 aa8.76□□□□□ -1.01
LMO3-220ENST00000539232 SHMT1P34896 483 aa8.76□□□□□ -1.01
LMO3-220ENST00000539232 CAP2P40123 477 aa8.76□□□□□ -1.01
LMO3-220ENST00000539232 MAGEA10P43363 369 aaPredicted RBP8.76□□□□□ -1.01
LMO3-220ENST00000539232 SPP2Q13103 211 aa8.76□□□□□ -1.01
LMO3-220ENST00000539232 HDAC1Q13547 482 aaPredicted RBP8.76□□□□□ -1.01
LMO3-220ENST00000539232 ANKRD45Q5TZF3 282 aa8.76□□□□□ -1.01
LMO3-220ENST00000539232 B4GALNT3Q6L9W6 998 aa8.76□□□□□ -1.01
LMO3-220ENST00000539232 POTEEQ6S8J3 1075 aa8.76□□□□□ -1.01
LMO3-220ENST00000539232 CLEC10AQ8IUN9 316 aa8.76□□□□□ -1.01
LMO3-220ENST00000539232 UBE2OQ9C0C9 1292 aaKnown RBP8.76□□□□□ -1.01
LMO3-220ENST00000539232 CPA4Q9UI42 421 aa8.76□□□□□ -1.01
LMO3-220ENST00000539232 ADGRA2Q96PE1 1338 aa8.76□□□□□ -1.01
LMO3-220ENST00000539232 ZSWIM8A7E2V4 1837 aa8.75□□□□□ -1.01
LMO3-220ENST00000539232 A0A0G2JLL6 359 aaPredicted RBP8.75□□□□□ -1.01
LMO3-220ENST00000539232 M0R2C6 588 aa8.75□□□□□ -1.01
LMO3-220ENST00000539232 SGPL1O95470 568 aa8.75□□□□□ -1.01
LMO3-220ENST00000539232 PLCG2P16885 1265 aa8.75□□□□□ -1.01
LMO3-220ENST00000539232 GRK4P32298 578 aa8.75□□□□□ -1.01
LMO3-220ENST00000539232 GUCY1A2P33402 732 aa8.75□□□□□ -1.01
LMO3-220ENST00000539232 USP5P45974 858 aa8.75□□□□□ -1.01
LMO3-220ENST00000539232 LACTBP83111 547 aaPredicted RBP8.75□□□□□ -1.01
LMO3-220ENST00000539232 TAF1CQ15572 869 aaPredicted RBP8.75□□□□□ -1.01
LMO3-220ENST00000539232 ZNF697Q5TEC3 545 aa8.75□□□□□ -1.01
LMO3-220ENST00000539232 PRRT2Q7Z6L0 340 aaPredicted RBP8.75□□□□□ -1.01
LMO3-220ENST00000539232 ACER1Q8TDN7 264 aa8.75□□□□□ -1.01
LMO3-220ENST00000539232 HOOK2Q96ED9 719 aa8.75□□□□□ -1.01
LMO3-220ENST00000539232 FAM161BQ96MY7 647 aa8.75□□□□□ -1.01
LMO3-220ENST00000539232 CDX2Q99626 313 aaPredicted RBP8.75□□□□□ -1.01
LMO3-220ENST00000539232 NOL10Q9BSC4 688 aaKnown RBP8.75□□□□□ -1.01
LMO3-220ENST00000539232 LNPKQ9C0E8 428 aa8.75□□□□□ -1.01
LMO3-220ENST00000539232 DCP1AQ9NPI6 582 aaPredicted RBP8.75□□□□□ -1.01
LMO3-220ENST00000539232 PICK1Q9NRD5 415 aa8.75□□□□□ -1.01
LMO3-220ENST00000539232 PI4KBQ9UBF8 816 aa8.75□□□□□ -1.01
LMO3-220ENST00000539232 ZMYND8Q9ULU4 1186 aaPredicted RBP8.75□□□□□ -1.01
LMO3-220ENST00000539232 MUC6Q6W4X9 2439 aa8.74□□□□□ -1.01
LMO3-220ENST00000539232 CXCL11O14625 94 aa8.74□□□□□ -1.01
LMO3-220ENST00000539232 FOXP2O15409 715 aa8.74□□□□□ -1.01
LMO3-220ENST00000539232 GH2P01242 217 aa8.74□□□□□ -1.01
LMO3-220ENST00000539232 HMGCS2P54868 508 aa8.74□□□□□ -1.01
LMO3-220ENST00000539232 UBXN2AP68543 259 aa8.74□□□□□ -1.01
LMO3-220ENST00000539232 GABPAQ06546 454 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms