RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 ASCC2Q9H1I8 757 aaPredicted RBP15.29■□□□□ 0.04
VAMP1-206ENST00000538970 PALD1Q9ULE6 856 aa15.29■□□□□ 0.04
VAMP1-206ENST00000538970 IDH1O75874 414 aaKnown RBP15.28■□□□□ 0.04
VAMP1-206ENST00000538970 GDF11O95390 407 aa15.28■□□□□ 0.04
VAMP1-206ENST00000538970 CYP7A1P22680 504 aa15.28■□□□□ 0.04
VAMP1-206ENST00000538970 DYNLL1P63167 89 aaKnown RBP15.28■□□□□ 0.04
VAMP1-206ENST00000538970 SHROOM1Q2M3G4 852 aaPredicted RBP15.28■□□□□ 0.04
VAMP1-206ENST00000538970 DIEXFQ68CQ4 756 aaKnown RBP15.28■□□□□ 0.04
VAMP1-206ENST00000538970 FOXP4Q8IVH2 680 aaPredicted RBP15.28■□□□□ 0.04
VAMP1-206ENST00000538970 CRACR2BQ8N4Y2 399 aaPredicted RBP15.28■□□□□ 0.04
VAMP1-206ENST00000538970 PANK1Q8TE04 598 aa15.28■□□□□ 0.04
VAMP1-206ENST00000538970 U2AF1L4Q8WU68 220 aaKnown RBP15.28■□□□□ 0.04
VAMP1-206ENST00000538970 COA7Q96BR5 231 aa15.28■□□□□ 0.04
VAMP1-206ENST00000538970 TRIM34Q9BYJ4 488 aa15.28■□□□□ 0.04
VAMP1-206ENST00000538970 EXOC6BQ9Y2D4 811 aa15.28■□□□□ 0.04
VAMP1-206ENST00000538970 NDUFB9Q9Y6M9 179 aa15.28■□□□□ 0.04
VAMP1-206ENST00000538970 MYO5AQ9Y4I1 1855 aaKnown RBP15.28■□□□□ 0.04
VAMP1-206ENST00000538970 HLA-DOAP06340 250 aa15.27■□□□□ 0.04
VAMP1-206ENST00000538970 BACE1P56817 501 aa15.27■□□□□ 0.04
VAMP1-206ENST00000538970 ERC1Q8IUD2 1116 aa15.27■□□□□ 0.04
VAMP1-206ENST00000538970 MIGA1Q8NAN2 632 aa15.27■□□□□ 0.04
VAMP1-206ENST00000538970 GINM1Q9NU53 330 aa15.27■□□□□ 0.04
VAMP1-206ENST00000538970 SAP30BPQ9UHR5 308 aaKnown RBP15.27■□□□□ 0.04
VAMP1-206ENST00000538970 ZBTB21Q9ULJ3 1066 aa15.27■□□□□ 0.04
VAMP1-206ENST00000538970 SGPL1O95470 568 aa15.26■□□□□ 0.03
VAMP1-206ENST00000538970 AACSQ86V21 672 aa15.26■□□□□ 0.03
VAMP1-206ENST00000538970 CERS3Q8IU89 383 aa15.26■□□□□ 0.03
VAMP1-206ENST00000538970 MAGEB6Q8N7X4 407 aa15.26■□□□□ 0.03
VAMP1-206ENST00000538970 HTATIP2Q9BUP3 242 aa15.26■□□□□ 0.03
VAMP1-206ENST00000538970 COL25A1Q9BXS0 654 aaPredicted RBP15.26■□□□□ 0.03
VAMP1-206ENST00000538970 ANTXR1Q9H6X2 564 aa15.26■□□□□ 0.03
VAMP1-206ENST00000538970 TMOD4Q9NZQ9 345 aa15.26■□□□□ 0.03
VAMP1-206ENST00000538970 MORF4L1Q9UBU8 362 aa15.26■□□□□ 0.03
VAMP1-206ENST00000538970 STAP2Q9UGK3 403 aa15.26■□□□□ 0.03
VAMP1-206ENST00000538970 TAOK2Q9UL54 1235 aa15.26■□□□□ 0.03
VAMP1-206ENST00000538970 FARP2O94887 1054 aaPredicted RBP15.25■□□□□ 0.03
VAMP1-206ENST00000538970 HOXA7P31268 230 aaPredicted RBP15.25■□□□□ 0.03
VAMP1-206ENST00000538970 IRX3P78415 501 aaPredicted RBP15.25■□□□□ 0.03
VAMP1-206ENST00000538970 TMED8Q6PL24 325 aaPredicted RBP15.25■□□□□ 0.03
VAMP1-206ENST00000538970 Q7L0L9 218 aa15.25■□□□□ 0.03
VAMP1-206ENST00000538970 PAK6Q9NQU5 681 aaPredicted RBP15.25■□□□□ 0.03
VAMP1-206ENST00000538970 NR2E3Q9Y5X4 410 aa15.25■□□□□ 0.03
VAMP1-206ENST00000538970 DDX60LQ5H9U9 1706 aaKnown RBP15.25■□□□□ 0.03
VAMP1-206ENST00000538970 A0A1W2PPC1 479 aa15.24■□□□□ 0.03
VAMP1-206ENST00000538970 C19orf81C9J6K1 198 aa15.24■□□□□ 0.03
VAMP1-206ENST00000538970 USP17L10C9JJH3 530 aa15.24■□□□□ 0.03
VAMP1-206ENST00000538970 USP5P45974 858 aa15.24■□□□□ 0.03
VAMP1-206ENST00000538970 MAP3K12Q12852 859 aa15.24■□□□□ 0.03
VAMP1-206ENST00000538970 DEFB118Q96PH6 123 aa15.24■□□□□ 0.03
VAMP1-206ENST00000538970 EHD4Q9H223 541 aa15.24■□□□□ 0.03
VAMP1-206ENST00000538970 HERVK_113P62684 666 aa15.23■□□□□ 0.03
VAMP1-206ENST00000538970 HSP90AB4PQ58FF6 505 aa15.23■□□□□ 0.03
VAMP1-206ENST00000538970 TATDN1Q6P1N9 297 aa15.23■□□□□ 0.03
VAMP1-206ENST00000538970 RHPN1Q8TCX5 695 aa15.23■□□□□ 0.03
VAMP1-206ENST00000538970 P2RX7Q99572 595 aaKnown RBP15.23■□□□□ 0.03
VAMP1-206ENST00000538970 RIOK1Q9BRS2 568 aaKnown RBP15.23■□□□□ 0.03
VAMP1-206ENST00000538970 TXNRD2Q9NNW7 524 aa15.23■□□□□ 0.03
VAMP1-206ENST00000538970 IL1RAPL2Q9NP60 686 aa15.23■□□□□ 0.03
VAMP1-206ENST00000538970 GJD2Q9UKL4 321 aa15.23■□□□□ 0.03
VAMP1-206ENST00000538970 PEX10O60683 326 aa15.22■□□□□ 0.03
VAMP1-206ENST00000538970 GH2P01242 217 aa15.22■□□□□ 0.03
VAMP1-206ENST00000538970 HMGCRP04035 888 aa15.22■□□□□ 0.03
VAMP1-206ENST00000538970 CAPN2P17655 700 aa15.22■□□□□ 0.03
VAMP1-206ENST00000538970 DEFB123Q8N688 67 aa15.22■□□□□ 0.03
VAMP1-206ENST00000538970 CRISPLD2Q9H0B8 497 aa15.22■□□□□ 0.03
VAMP1-206ENST00000538970 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.22■□□□□ 0.03
VAMP1-206ENST00000538970 EMILIN3Q9NT22 766 aa15.22■□□□□ 0.03
VAMP1-206ENST00000538970 SERPINB13Q9UIV8 391 aa15.22■□□□□ 0.03
VAMP1-206ENST00000538970 PLXNB2O15031 1838 aa15.22■□□□□ 0.03
VAMP1-206ENST00000538970 MYH1P12882 1939 aa15.21■□□□□ 0.03
VAMP1-206ENST00000538970 TFRCP02786 760 aaKnown RBP15.21■□□□□ 0.03
VAMP1-206ENST00000538970 MS4A1P11836 297 aa15.21■□□□□ 0.03
VAMP1-206ENST00000538970 TTF1Q15361 905 aaPredicted RBP15.21■□□□□ 0.03
VAMP1-206ENST00000538970 USP17L2Q6R6M4 530 aa15.21■□□□□ 0.03
VAMP1-206ENST00000538970 TTC6Q86TZ1 520 aa15.21■□□□□ 0.03
VAMP1-206ENST00000538970 GPRC5AQ8NFJ5 357 aa15.21■□□□□ 0.03
VAMP1-206ENST00000538970 C12orf42Q96LP6 360 aa15.21■□□□□ 0.03
VAMP1-206ENST00000538970 RBPJLQ9UBG7 517 aa15.21■□□□□ 0.03
VAMP1-206ENST00000538970 EVI5O60447 810 aa15.2■□□□□ 0.02
VAMP1-206ENST00000538970 PDE6AP16499 860 aa15.2■□□□□ 0.02
VAMP1-206ENST00000538970 TRIM32Q13049 653 aa15.2■□□□□ 0.02
VAMP1-206ENST00000538970 SIRT2Q8IXJ6 389 aa15.2■□□□□ 0.02
VAMP1-206ENST00000538970 RPAP2Q8IXW5 612 aaPredicted RBP15.2■□□□□ 0.02
VAMP1-206ENST00000538970 CLASRPQ8N2M8 674 aaKnown RBP15.2■□□□□ 0.02
VAMP1-206ENST00000538970 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.2■□□□□ 0.02
VAMP1-206ENST00000538970 GTF3C2Q8WUA4 911 aaPredicted RBP15.2■□□□□ 0.02
VAMP1-206ENST00000538970 TRIB2Q92519 343 aa15.2■□□□□ 0.02
VAMP1-206ENST00000538970 KIF1BPQ96EK5 621 aa15.2■□□□□ 0.02
VAMP1-206ENST00000538970 DDX19BQ9UMR2 479 aa15.2■□□□□ 0.02
VAMP1-206ENST00000538970 NAV1Q8NEY1 1877 aa15.2■□□□□ 0.02
VAMP1-206ENST00000538970 MAGEB6P1A0A0J9YX57 407 aa15.19■□□□□ 0.02
VAMP1-206ENST00000538970 APBB1O00213 710 aa15.19■□□□□ 0.02
VAMP1-206ENST00000538970 SHMT1P34896 483 aa15.19■□□□□ 0.02
VAMP1-206ENST00000538970 PLCD1P51178 756 aa15.19■□□□□ 0.02
VAMP1-206ENST00000538970 ERVK-9P63128 1117 aa15.19■□□□□ 0.02
VAMP1-206ENST00000538970 ERVK-24P63145 666 aa15.19■□□□□ 0.02
VAMP1-206ENST00000538970 CERKLQ49MI3 558 aaPredicted RBP15.19■□□□□ 0.02
VAMP1-206ENST00000538970 SLC9C2Q5TAH2 1124 aa15.19■□□□□ 0.02
VAMP1-206ENST00000538970 POTEEQ6S8J3 1075 aa15.19■□□□□ 0.02
VAMP1-206ENST00000538970 SOCS4Q8WXH5 440 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms