RNA–Protein interactions for RNA: ENST00000538877.5

RAP1B-218, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 4

Gene RAP1B, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-218ENST00000538877 DPF3Q92784 378 aa29.03■■■□□ 2.24
RAP1B-218ENST00000538877 WDR18Q9BV38 432 aa29.03■■■□□ 2.24
RAP1B-218ENST00000538877 COLQQ9Y215 455 aaPredicted RBP29.03■■■□□ 2.24
RAP1B-218ENST00000538877 NAV1Q8NEY1 1877 aa29.03■■■□□ 2.24
RAP1B-218ENST00000538877 ZBED9Q6R2W3 1325 aa29.02■■■□□ 2.24
RAP1B-218ENST00000538877 UBE2Q1Q7Z7E8 422 aa29.02■■■□□ 2.24
RAP1B-218ENST00000538877 METTL16Q86W50 562 aaKnown RBP29.02■■■□□ 2.24
RAP1B-218ENST00000538877 MIGA1Q8NAN2 632 aa29.02■■■□□ 2.24
RAP1B-218ENST00000538877 HLA-DOAP06340 250 aa29.01■■■□□ 2.23
RAP1B-218ENST00000538877 BACE1P56817 501 aa29.01■■■□□ 2.23
RAP1B-218ENST00000538877 AACSQ86V21 672 aa29.01■■■□□ 2.23
RAP1B-218ENST00000538877 MAGEB6Q8N7X4 407 aa29.01■■■□□ 2.23
RAP1B-218ENST00000538877 TMOD4Q9NZQ9 345 aa29.01■■■□□ 2.23
RAP1B-218ENST00000538877 FARP2O94887 1054 aaPredicted RBP29■■■□□ 2.23
RAP1B-218ENST00000538877 IRX3P78415 501 aaPredicted RBP29■■■□□ 2.23
RAP1B-218ENST00000538877 ZBTB21Q9ULJ3 1066 aa29■■■□□ 2.23
RAP1B-218ENST00000538877 DDX60LQ5H9U9 1706 aaKnown RBP29■■■□□ 2.23
RAP1B-218ENST00000538877 ALPK3Q96L96 1907 aa28.99■■■□□ 2.23
RAP1B-218ENST00000538877 SGPL1O95470 568 aa28.99■■■□□ 2.23
RAP1B-218ENST00000538877 ERC1Q8IUD2 1116 aa28.99■■■□□ 2.23
RAP1B-218ENST00000538877 ANTXR1Q9H6X2 564 aa28.99■■■□□ 2.23
RAP1B-218ENST00000538877 USP5P45974 858 aa28.98■■■□□ 2.23
RAP1B-218ENST00000538877 DEFB118Q96PH6 123 aa28.98■■■□□ 2.23
RAP1B-218ENST00000538877 HTATIP2Q9BUP3 242 aa28.98■■■□□ 2.23
RAP1B-218ENST00000538877 FXR1P51114 621 aaKnown RBP eCLIP28.97■■■□□ 2.23
RAP1B-218ENST00000538877 GINM1Q9NU53 330 aa28.97■■■□□ 2.23
RAP1B-218ENST00000538877 MYH8P13535 1937 aa28.96■■■□□ 2.23
RAP1B-218ENST00000538877 C19orf81C9J6K1 198 aa28.96■■■□□ 2.23
RAP1B-218ENST00000538877 USP17L10C9JJH3 530 aa28.96■■■□□ 2.23
RAP1B-218ENST00000538877 MAP3K12Q12852 859 aa28.96■■■□□ 2.23
RAP1B-218ENST00000538877 CERS3Q8IU89 383 aa28.96■■■□□ 2.23
RAP1B-218ENST00000538877 IL1RAPL2Q9NP60 686 aa28.96■■■□□ 2.23
RAP1B-218ENST00000538877 PAK6Q9NQU5 681 aaPredicted RBP28.96■■■□□ 2.23
RAP1B-218ENST00000538877 MORF4L1Q9UBU8 362 aa28.96■■■□□ 2.23
RAP1B-218ENST00000538877 TFRCP02786 760 aaKnown RBP28.95■■■□□ 2.22
RAP1B-218ENST00000538877 HOXA7P31268 230 aaPredicted RBP28.95■■■□□ 2.22
RAP1B-218ENST00000538877 P2RX7Q99572 595 aaKnown RBP28.95■■■□□ 2.22
RAP1B-218ENST00000538877 PEX10O60683 326 aa28.94■■■□□ 2.22
RAP1B-218ENST00000538877 GH2P01242 217 aa28.93■■■□□ 2.22
RAP1B-218ENST00000538877 HMGCRP04035 888 aa28.93■■■□□ 2.22
RAP1B-218ENST00000538877 HERVK_113P62684 666 aa28.93■■■□□ 2.22
RAP1B-218ENST00000538877 HSP90AB4PQ58FF6 505 aa28.93■■■□□ 2.22
RAP1B-218ENST00000538877 CHRDL2Q6WN34 429 aa28.93■■■□□ 2.22
RAP1B-218ENST00000538877 XRN2Q9H0D6 950 aaKnown RBP eCLIP28.93■■■□□ 2.228e-42■■■■■ 28.4
RAP1B-218ENST00000538877 TXNRD2Q9NNW7 524 aa28.93■■■□□ 2.22
RAP1B-218ENST00000538877 GJD2Q9UKL4 321 aa28.93■■■□□ 2.22
RAP1B-218ENST00000538877 RHPN1Q8TCX5 695 aa28.92■■■□□ 2.22
RAP1B-218ENST00000538877 SERPINB13Q9UIV8 391 aa28.92■■■□□ 2.22
RAP1B-218ENST00000538877 MYH7P12883 1935 aa28.92■■■□□ 2.22
RAP1B-218ENST00000538877 APBB1O00213 710 aa28.91■■■□□ 2.22
RAP1B-218ENST00000538877 TATDN1Q6P1N9 297 aa28.9■■■□□ 2.22
RAP1B-218ENST00000538877 USP17L2Q6R6M4 530 aa28.9■■■□□ 2.22
RAP1B-218ENST00000538877 GPRC5AQ8NFJ5 357 aa28.9■■■□□ 2.22
RAP1B-218ENST00000538877 FEZ1Q99689 392 aa28.9■■■□□ 2.22
RAP1B-218ENST00000538877 CRISPLD2Q9H0B8 497 aa28.9■■■□□ 2.22
RAP1B-218ENST00000538877 EHD4Q9H223 541 aa28.9■■■□□ 2.22
RAP1B-218ENST00000538877 EMILIN3Q9NT22 766 aa28.9■■■□□ 2.22
RAP1B-218ENST00000538877 RANBP2P49792 3224 aaKnown RBP28.9■■■□□ 2.22
RAP1B-218ENST00000538877 BAZ2AQ9UIF9 1905 aaKnown RBP28.89■■■□□ 2.22
RAP1B-218ENST00000538877 MS4A1P11836 297 aa28.89■■■□□ 2.22
RAP1B-218ENST00000538877 TRIM32Q13049 653 aa28.89■■■□□ 2.22
RAP1B-218ENST00000538877 ZYXQ15942 572 aaKnown RBP28.89■■■□□ 2.22
RAP1B-218ENST00000538877 TMED8Q6PL24 325 aaPredicted RBP28.89■■■□□ 2.22
RAP1B-218ENST00000538877 RIOK1Q9BRS2 568 aaKnown RBP28.89■■■□□ 2.22
RAP1B-218ENST00000538877 BCL11AQ9H165 835 aa28.89■■■□□ 2.22
RAP1B-218ENST00000538877 NR2E3Q9Y5X4 410 aa28.89■■■□□ 2.22
RAP1B-218ENST00000538877 CYP2B6P20813 491 aa28.88■■■□□ 2.21
RAP1B-218ENST00000538877 TTF1Q15361 905 aaPredicted RBP28.88■■■□□ 2.21
RAP1B-218ENST00000538877 TTC6Q86TZ1 520 aa28.88■■■□□ 2.21
RAP1B-218ENST00000538877 TRIB2Q92519 343 aa28.88■■■□□ 2.21
RAP1B-218ENST00000538877 PAGR1Q9BTK6 254 aa28.88■■■□□ 2.21
RAP1B-218ENST00000538877 RBPJLQ9UBG7 517 aa28.88■■■□□ 2.21
RAP1B-218ENST00000538877 MAGEB6P1A0A0J9YX57 407 aa28.87■■■□□ 2.21
RAP1B-218ENST00000538877 CAPN2P17655 700 aa28.87■■■□□ 2.21
RAP1B-218ENST00000538877 RAB3GAP1Q15042 981 aa28.87■■■□□ 2.21
RAP1B-218ENST00000538877 CLASRPQ8N2M8 674 aaKnown RBP28.87■■■□□ 2.21
RAP1B-218ENST00000538877 PDE6AP16499 860 aa28.86■■■□□ 2.21
RAP1B-218ENST00000538877 ERVK-9P63128 1117 aa28.86■■■□□ 2.21
RAP1B-218ENST00000538877 ERVK-24P63145 666 aa28.86■■■□□ 2.21
RAP1B-218ENST00000538877 CERKLQ49MI3 558 aaPredicted RBP28.86■■■□□ 2.21
RAP1B-218ENST00000538877 SOCS4Q8WXH5 440 aa28.86■■■□□ 2.21
RAP1B-218ENST00000538877 KIF1BPQ96EK5 621 aa28.86■■■□□ 2.21
RAP1B-218ENST00000538877 PAWRQ96IZ0 340 aaKnown RBP28.86■■■□□ 2.21
RAP1B-218ENST00000538877 DNAJC2Q99543 621 aaKnown RBP28.86■■■□□ 2.21
RAP1B-218ENST00000538877 NUDT12Q9BQG2 462 aa28.86■■■□□ 2.21
RAP1B-218ENST00000538877 HMX1Q9NP08 348 aaPredicted RBP28.86■■■□□ 2.21
RAP1B-218ENST00000538877 RBM27Q9P2N5 1060 aaKnown RBP28.86■■■□□ 2.21
RAP1B-218ENST00000538877 COG6Q9Y2V7 657 aa28.86■■■□□ 2.21
RAP1B-218ENST00000538877 RPTORQ8N122 1335 aa28.86■■■□□ 2.21
RAP1B-218ENST00000538877 PLCD1P51178 756 aa28.85■■■□□ 2.21
RAP1B-218ENST00000538877 ABCB5Q2M3G0 1257 aa28.85■■■□□ 2.21
RAP1B-218ENST00000538877 SLC9C2Q5TAH2 1124 aa28.85■■■□□ 2.21
RAP1B-218ENST00000538877 CCAR1Q8IX12 1150 aaKnown RBP28.85■■■□□ 2.21
RAP1B-218ENST00000538877 DIS3LQ8TF46 1054 aaKnown RBP28.85■■■□□ 2.21
RAP1B-218ENST00000538877 GTF3C2Q8WUA4 911 aaPredicted RBP28.85■■■□□ 2.21
RAP1B-218ENST00000538877 PORCNQ9H237 461 aa28.85■■■□□ 2.21
RAP1B-218ENST00000538877 FRMPD3Q5JV73 1810 aa28.85■■■□□ 2.21
RAP1B-218ENST00000538877 GOLIM4O00461 696 aa28.84■■■□□ 2.21
RAP1B-218ENST00000538877 EVI5O60447 810 aa28.84■■■□□ 2.21
RAP1B-218ENST00000538877 HMMRO75330 724 aa28.84■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms