RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 IARSP41252 1262 aaKnown RBP21.08■□□□□ 0.97
SFSWAP-207ENST00000538548 MAP9Q49MG5 647 aa21.08■□□□□ 0.97
SFSWAP-207ENST00000538548 MMS22LQ6ZRQ5 1243 aa21.08■□□□□ 0.97
SFSWAP-207ENST00000538548 NOSTRINQ8IVI9 506 aa21.08■□□□□ 0.97
SFSWAP-207ENST00000538548 ACRBPQ8NEB7 543 aa21.08■□□□□ 0.97
SFSWAP-207ENST00000538548 APOA5Q6Q788 366 aa21.08■□□□□ 0.96
SFSWAP-207ENST00000538548 ITIH6Q6UXX5 1313 aa21.07■□□□□ 0.96
SFSWAP-207ENST00000538548 ARFGEF2Q9Y6D5 1785 aa21.07■□□□□ 0.96
SFSWAP-207ENST00000538548 ECM29Q5VYK3 1845 aa21.07■□□□□ 0.96
SFSWAP-207ENST00000538548 SH2B2O14492 632 aaPredicted RBP21.07■□□□□ 0.96
SFSWAP-207ENST00000538548 FILIP1LQ4L180 1135 aa21.07■□□□□ 0.96
SFSWAP-207ENST00000538548 ZNF579Q8NAF0 562 aaKnown RBP21.07■□□□□ 0.96
SFSWAP-207ENST00000538548 APPBP2Q92624 585 aa21.07■□□□□ 0.96
SFSWAP-207ENST00000538548 PLEKHA4Q9H4M7 779 aa21.07■□□□□ 0.96
SFSWAP-207ENST00000538548 TAOK2Q9UL54 1235 aa21.07■□□□□ 0.96
SFSWAP-207ENST00000538548 EYA2O00167 538 aa21.07■□□□□ 0.96
SFSWAP-207ENST00000538548 ACTN4O43707 911 aaKnown RBP21.07■□□□□ 0.96
SFSWAP-207ENST00000538548 GYPCP04921 128 aa21.07■□□□□ 0.96
SFSWAP-207ENST00000538548 ARHGAP25P42331 645 aa21.07■□□□□ 0.96
SFSWAP-207ENST00000538548 NTRK3Q16288 839 aa21.07■□□□□ 0.96
SFSWAP-207ENST00000538548 CDKAL1Q5VV42 579 aa21.07■□□□□ 0.96
SFSWAP-207ENST00000538548 GRAMD1CQ8IYS0 662 aa21.07■□□□□ 0.96
SFSWAP-207ENST00000538548 SEMA3EO15041 775 aa21.06■□□□□ 0.96
SFSWAP-207ENST00000538548 RXRAP19793 462 aa21.06■□□□□ 0.96
SFSWAP-207ENST00000538548 GRIN1Q05586 938 aa21.06■□□□□ 0.96
SFSWAP-207ENST00000538548 SLC52A2Q9HAB3 445 aa21.06■□□□□ 0.96
SFSWAP-207ENST00000538548 HPCAL4Q9UM19 191 aa21.06■□□□□ 0.96
SFSWAP-207ENST00000538548 UBN2Q6ZU65 1347 aa21.06■□□□□ 0.96
SFSWAP-207ENST00000538548 WDR17Q8IZU2 1322 aa21.06■□□□□ 0.96
SFSWAP-207ENST00000538548 SYNRGQ9UMZ2 1314 aa21.06■□□□□ 0.96
SFSWAP-207ENST00000538548 SWT1Q5T5J6 900 aaKnown RBP21.06■□□□□ 0.96
SFSWAP-207ENST00000538548 MICU3Q86XE3 530 aa21.06■□□□□ 0.96
SFSWAP-207ENST00000538548 TOMM22Q9NS69 142 aa21.06■□□□□ 0.96
SFSWAP-207ENST00000538548 ABL1P00519 1130 aa21.05■□□□□ 0.96
SFSWAP-207ENST00000538548 FXR1P51114 621 aaKnown RBP eCLIP21.05■□□□□ 0.96
SFSWAP-207ENST00000538548 USP14P54578 494 aa21.05■□□□□ 0.96
SFSWAP-207ENST00000538548 CHRNA2Q15822 529 aa21.05■□□□□ 0.96
SFSWAP-207ENST00000538548 NCAPH2Q6IBW4 605 aa21.05■□□□□ 0.96
SFSWAP-207ENST00000538548 SMARCC1Q92922 1105 aaPredicted RBP21.05■□□□□ 0.96
SFSWAP-207ENST00000538548 ZNF496Q96IT1 587 aaPredicted RBP21.05■□□□□ 0.96
SFSWAP-207ENST00000538548 PUS7LQ9H0K6 701 aaKnown RBP21.05■□□□□ 0.96
SFSWAP-207ENST00000538548 H7C1W4 665 aa21.05■□□□□ 0.96
SFSWAP-207ENST00000538548 RANBP6O60518 1105 aaKnown RBP21.05■□□□□ 0.96
SFSWAP-207ENST00000538548 SHOX2O60902 331 aaPredicted RBP21.05■□□□□ 0.96
SFSWAP-207ENST00000538548 TOB1P50616 345 aaPredicted RBP21.05■□□□□ 0.96
SFSWAP-207ENST00000538548 LRRC24Q50LG9 513 aa21.05■□□□□ 0.96
SFSWAP-207ENST00000538548 SEC31BQ9NQW1 1179 aa21.05■□□□□ 0.96
SFSWAP-207ENST00000538548 KDM6AO15550 1401 aaPredicted RBP21.04■□□□□ 0.96
SFSWAP-207ENST00000538548 CDHR2Q9BYE9 1310 aa21.04■□□□□ 0.96
SFSWAP-207ENST00000538548 STK36Q9NRP7 1315 aa21.04■□□□□ 0.96
SFSWAP-207ENST00000538548 ZBTB43O43298 467 aa21.04■□□□□ 0.96
SFSWAP-207ENST00000538548 PIP4K2AP48426 406 aaPredicted RBP21.04■□□□□ 0.96
SFSWAP-207ENST00000538548 ERVK-24P63145 666 aa21.04■□□□□ 0.96
SFSWAP-207ENST00000538548 AKAP17AQ02040 695 aaKnown RBP21.04■□□□□ 0.96
SFSWAP-207ENST00000538548 CUL4BQ13620 913 aa21.04■□□□□ 0.96
SFSWAP-207ENST00000538548 MCTP2Q6DN12 878 aa21.04■□□□□ 0.96
SFSWAP-207ENST00000538548 ZC3H4Q9UPT8 1303 aaKnown RBP21.04■□□□□ 0.96
SFSWAP-207ENST00000538548 GPAA1O43292 621 aa21.04■□□□□ 0.96
SFSWAP-207ENST00000538548 CIAO1O76071 339 aa21.04■□□□□ 0.96
SFSWAP-207ENST00000538548 SNRPA1P09661 255 aaKnown RBP21.04■□□□□ 0.96
SFSWAP-207ENST00000538548 RILPL1Q5EBL4 403 aa21.04■□□□□ 0.96
SFSWAP-207ENST00000538548 CYP26C1Q6V0L0 522 aa21.04■□□□□ 0.96
SFSWAP-207ENST00000538548 CYB5R4Q7L1T6 521 aa21.04■□□□□ 0.96
SFSWAP-207ENST00000538548 PLBD2Q8NHP8 589 aa21.04■□□□□ 0.96
SFSWAP-207ENST00000538548 COG1Q8WTW3 980 aa21.04■□□□□ 0.96
SFSWAP-207ENST00000538548 NBPF3Q9H094 633 aa21.04■□□□□ 0.96
SFSWAP-207ENST00000538548 ABHD10Q9NUJ1 306 aa21.03■□□□□ 0.96
SFSWAP-207ENST00000538548 SAFBQ15424 915 aaKnown RBP eCLIP21.03■□□□□ 0.964e-7■■■■□ 21.8
SFSWAP-207ENST00000538548 TRAPPC11Q7Z392 1133 aa21.03■□□□□ 0.96
SFSWAP-207ENST00000538548 MICALL1Q8N3F8 863 aa21.03■□□□□ 0.96
SFSWAP-207ENST00000538548 CEP89Q96ST8 783 aa21.03■□□□□ 0.96
SFSWAP-207ENST00000538548 CAMTA1Q9Y6Y1 1673 aa21.03■□□□□ 0.96
SFSWAP-207ENST00000538548 MYH8P13535 1937 aa21.02■□□□□ 0.96
SFSWAP-207ENST00000538548 TARSL2A2RTX5 802 aaKnown RBP21.02■□□□□ 0.96
SFSWAP-207ENST00000538548 BTBD18B2RXH4 712 aa21.02■□□□□ 0.96
SFSWAP-207ENST00000538548 KLHL10Q6JEL2 608 aa21.02■□□□□ 0.96
SFSWAP-207ENST00000538548 WASF1Q92558 559 aa21.02■□□□□ 0.96
SFSWAP-207ENST00000538548 TMEM87BQ96K49 555 aa21.02■□□□□ 0.96
SFSWAP-207ENST00000538548 DENND2AQ9ULE3 1009 aa21.02■□□□□ 0.96
SFSWAP-207ENST00000538548 SRPRBQ9Y5M8 271 aaKnown RBP21.02■□□□□ 0.96
SFSWAP-207ENST00000538548 LOC102724159A0A0B4J2E5 919 aa21.02■□□□□ 0.96
SFSWAP-207ENST00000538548 GOLGA8AA7E2F4 631 aa21.02■□□□□ 0.96
SFSWAP-207ENST00000538548 STIM1Q13586 685 aa21.02■□□□□ 0.96
SFSWAP-207ENST00000538548 PWP2Q15269 919 aaKnown RBP21.02■□□□□ 0.96
SFSWAP-207ENST00000538548 MST1RQ04912 1400 aa21.02■□□□□ 0.95
SFSWAP-207ENST00000538548 MMP1P03956 469 aa21.01■□□□□ 0.95
SFSWAP-207ENST00000538548 STX17P56962 302 aa21.01■□□□□ 0.95
SFSWAP-207ENST00000538548 SSRP1Q08945 709 aaKnown RBP21.01■□□□□ 0.95
SFSWAP-207ENST00000538548 HSP90AB3PQ58FF7 597 aa21.01■□□□□ 0.95
SFSWAP-207ENST00000538548 TBC1D10CQ8IV04 446 aa21.01■□□□□ 0.95
SFSWAP-207ENST00000538548 FAM217BQ9NTX9 383 aaPredicted RBP21.01■□□□□ 0.95
SFSWAP-207ENST00000538548 CD44P16070 742 aaKnown RBP21.01■□□□□ 0.95
SFSWAP-207ENST00000538548 SGMS1Q86VZ5 419 aa21.01■□□□□ 0.95
SFSWAP-207ENST00000538548 DIS3L2Q8IYB7 885 aaKnown RBP21.01■□□□□ 0.95
SFSWAP-207ENST00000538548 SLC26A6Q9BXS9 759 aa21.01■□□□□ 0.95
SFSWAP-207ENST00000538548 SENP2Q9HC62 589 aa21.01■□□□□ 0.95
SFSWAP-207ENST00000538548 EXOC5O00471 708 aa21■□□□□ 0.95
SFSWAP-207ENST00000538548 PSMD14O00487 310 aa21■□□□□ 0.95
SFSWAP-207ENST00000538548 ERLIN2O94905 339 aa21■□□□□ 0.95
SFSWAP-207ENST00000538548 ZNF594Q96JF6 807 aaPredicted RBP21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms