RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 TKFCQ3LXA3 575 aa4.2□□□□□ -1.74
PTPN22-211ENST00000538253 C20orf194Q5TEA3 1177 aa4.2□□□□□ -1.74
PTPN22-211ENST00000538253 CDC42EP5Q6NZY7 148 aa4.2□□□□□ -1.74
PTPN22-211ENST00000538253 MFSD6Q6ZSS7 791 aa4.2□□□□□ -1.74
PTPN22-211ENST00000538253 PLEKHM2Q8IWE5 1019 aa4.2□□□□□ -1.74
PTPN22-211ENST00000538253 KCTD17Q8N5Z5 321 aa4.2□□□□□ -1.74
PTPN22-211ENST00000538253 PROCA1Q8NCQ7 364 aaPredicted RBP4.2□□□□□ -1.74
PTPN22-211ENST00000538253 UBAC1Q9BSL1 405 aa4.2□□□□□ -1.74
PTPN22-211ENST00000538253 WDR18Q9BV38 432 aa4.2□□□□□ -1.74
PTPN22-211ENST00000538253 NMRK2Q9NPI5 230 aa4.2□□□□□ -1.74
PTPN22-211ENST00000538253 ANGEL1Q9UNK9 670 aaKnown RBP4.2□□□□□ -1.74
PTPN22-211ENST00000538253 WDR19Q8NEZ3 1342 aa4.2□□□□□ -1.74
PTPN22-211ENST00000538253 DICER1Q9UPY3 1922 aaKnown RBP4.2□□□□□ -1.74
PTPN22-211ENST00000538253 BRCA1P38398 1863 aaKnown RBP4.2□□□□□ -1.74
PTPN22-211ENST00000538253 GPAA1O43292 621 aa4.2□□□□□ -1.74
PTPN22-211ENST00000538253 CYP2E1P05181 493 aaPredicted RBP4.2□□□□□ -1.74
PTPN22-211ENST00000538253 SDSP20132 328 aa4.2□□□□□ -1.74
PTPN22-211ENST00000538253 ZNF157P51786 506 aaPredicted RBP4.2□□□□□ -1.74
PTPN22-211ENST00000538253 CERKLQ49MI3 558 aaPredicted RBP4.2□□□□□ -1.74
PTPN22-211ENST00000538253 ANP32BQ92688 251 aaKnown RBP4.2□□□□□ -1.74
PTPN22-211ENST00000538253 ERO1AQ96HE7 468 aa4.2□□□□□ -1.74
PTPN22-211ENST00000538253 TDRD3Q9H7E2 651 aaKnown RBP4.2□□□□□ -1.74
PTPN22-211ENST00000538253 SNRKQ9NRH2 765 aa4.2□□□□□ -1.74
PTPN22-211ENST00000538253 FBXO40Q9UH90 709 aa4.2□□□□□ -1.74
PTPN22-211ENST00000538253 WWC3Q9ULE0 1092 aa4.2□□□□□ -1.74
PTPN22-211ENST00000538253 LOC102724159A0A0B4J2E5 919 aa4.19□□□□□ -1.74
PTPN22-211ENST00000538253 TCP10L2B9ZVM9 353 aa4.19□□□□□ -1.74
PTPN22-211ENST00000538253 ORC4O43929 436 aa4.19□□□□□ -1.74
PTPN22-211ENST00000538253 CTCFP49711 727 aaPredicted RBP4.19□□□□□ -1.74
PTPN22-211ENST00000538253 PWP2Q15269 919 aaKnown RBP4.19□□□□□ -1.74
PTPN22-211ENST00000538253 ABCB5Q2M3G0 1257 aa4.19□□□□□ -1.74
PTPN22-211ENST00000538253 APOBEC3HQ6NTF7 200 aaKnown RBP4.19□□□□□ -1.74
PTPN22-211ENST00000538253 SIRT2Q8IXJ6 389 aa4.19□□□□□ -1.74
PTPN22-211ENST00000538253 TMEM87BQ96K49 555 aa4.19□□□□□ -1.74
PTPN22-211ENST00000538253 TANGO6Q9C0B7 1094 aa4.19□□□□□ -1.74
PTPN22-211ENST00000538253 TOMM22Q9NS69 142 aa4.19□□□□□ -1.74
PTPN22-211ENST00000538253 ANAPC4Q9UJX5 808 aa4.19□□□□□ -1.74
PTPN22-211ENST00000538253 IQSEC3Q9UPP2 1182 aaPredicted RBP4.19□□□□□ -1.74
PTPN22-211ENST00000538253 ZBTB12Q9Y330 459 aaPredicted RBP4.19□□□□□ -1.74
PTPN22-211ENST00000538253 SPDYE5A6NIY4 337 aa4.19□□□□□ -1.74
PTPN22-211ENST00000538253 hCG_1984214I3L0E3 225 aa4.19□□□□□ -1.74
PTPN22-211ENST00000538253 CDKL5O76039 1030 aa4.19□□□□□ -1.74
PTPN22-211ENST00000538253 XBP1P17861 261 aa4.19□□□□□ -1.74
PTPN22-211ENST00000538253 PRDX5P30044 214 aa4.19□□□□□ -1.74
PTPN22-211ENST00000538253 AKAP17AQ02040 695 aaKnown RBP4.19□□□□□ -1.74
PTPN22-211ENST00000538253 SAMD7Q7Z3H4 446 aa4.19□□□□□ -1.74
PTPN22-211ENST00000538253 ZNF713Q8N859 430 aaPredicted RBP4.19□□□□□ -1.74
PTPN22-211ENST00000538253 NCOA7Q8NI08 942 aa4.19□□□□□ -1.74
PTPN22-211ENST00000538253 CCDC12Q8WUD4 166 aaPredicted RBP4.19□□□□□ -1.74
PTPN22-211ENST00000538253 C22orf23Q9BZE7 217 aa4.19□□□□□ -1.74
PTPN22-211ENST00000538253 AATFQ9NY61 560 aaKnown RBP eCLIP4.19□□□□□ -1.74
PTPN22-211ENST00000538253 HOXC10Q9NYD6 342 aa4.19□□□□□ -1.74
PTPN22-211ENST00000538253 NYAP2Q9P242 653 aa4.19□□□□□ -1.74
PTPN22-211ENST00000538253 TNNQ9UQP3 1299 aa4.19□□□□□ -1.74
PTPN22-211ENST00000538253 ZBED4O75132 1171 aa4.19□□□□□ -1.74
PTPN22-211ENST00000538253 TSPY3P0CV98 308 aa4.19□□□□□ -1.74
PTPN22-211ENST00000538253 TSPY8P0CW00 308 aa4.19□□□□□ -1.74
PTPN22-211ENST00000538253 MAP3K10Q02779 954 aa4.19□□□□□ -1.74
PTPN22-211ENST00000538253 PICALMQ13492 652 aa4.19□□□□□ -1.74
PTPN22-211ENST00000538253 GPATCH4Q5T3I0 446 aaKnown RBP4.19□□□□□ -1.74
PTPN22-211ENST00000538253 SMAP1Q8IYB5 467 aaPredicted RBP4.19□□□□□ -1.74
PTPN22-211ENST00000538253 TGFBRAP1Q8WUH2 860 aa4.19□□□□□ -1.74
PTPN22-211ENST00000538253 PRMT6Q96LA8 375 aaPredicted RBP4.19□□□□□ -1.74
PTPN22-211ENST00000538253 WRNIP1Q96S55 665 aa4.19□□□□□ -1.74
PTPN22-211ENST00000538253 STRBPQ96SI9 672 aaKnown RBP4.19□□□□□ -1.74
PTPN22-211ENST00000538253 ZNF408Q9H9D4 720 aa4.19□□□□□ -1.74
PTPN22-211ENST00000538253 PIH1D3Q9NQM4 214 aaKnown RBP4.19□□□□□ -1.74
PTPN22-211ENST00000538253 TCP11L1Q9NUJ3 509 aa4.19□□□□□ -1.74
PTPN22-211ENST00000538253 ZNF112Q9UJU3 913 aa4.19□□□□□ -1.74
PTPN22-211ENST00000538253 TIAM2Q8IVF5 1701 aa4.19□□□□□ -1.74
PTPN22-211ENST00000538253 ARAP2Q8WZ64 1704 aa4.19□□□□□ -1.74
PTPN22-211ENST00000538253 PAPPA2Q9BXP8 1791 aa4.19□□□□□ -1.74
PTPN22-211ENST00000538253 CLRN2A0PK11 232 aa4.18□□□□□ -1.74
PTPN22-211ENST00000538253 TSPY2A6NKD2 308 aa4.18□□□□□ -1.74
PTPN22-211ENST00000538253 USP17L15C9J2P7 530 aa4.18□□□□□ -1.74
PTPN22-211ENST00000538253 USP17L13C9JLJ4 530 aa4.18□□□□□ -1.74
PTPN22-211ENST00000538253 USP17L11C9JVI0 530 aa4.18□□□□□ -1.74
PTPN22-211ENST00000538253 USP17L18D6R9N7 530 aa4.18□□□□□ -1.74
PTPN22-211ENST00000538253 USP17L22D6RA61 530 aa4.18□□□□□ -1.74
PTPN22-211ENST00000538253 USP17L17D6RBQ6 530 aa4.18□□□□□ -1.74
PTPN22-211ENST00000538253 USP17L19D6RCP7 530 aa4.18□□□□□ -1.74
PTPN22-211ENST00000538253 USP17L20D6RJB6 530 aa4.18□□□□□ -1.74
PTPN22-211ENST00000538253 PRR29P0C7W0 189 aa4.18□□□□□ -1.74
PTPN22-211ENST00000538253 USP17L24Q0WX57 530 aa4.18□□□□□ -1.74
PTPN22-211ENST00000538253 NBPF20Q3BBV1 942 aa4.18□□□□□ -1.74
PTPN22-211ENST00000538253 LDLRAD1Q5T700 205 aa4.18□□□□□ -1.74
PTPN22-211ENST00000538253 TXNRD3Q86VQ6 643 aa4.18□□□□□ -1.74
PTPN22-211ENST00000538253 METTL16Q86W50 562 aaKnown RBP4.18□□□□□ -1.74
PTPN22-211ENST00000538253 PI4K2BQ8TCG2 481 aa4.18□□□□□ -1.74
PTPN22-211ENST00000538253 TRPM4Q8TD43 1214 aa4.18□□□□□ -1.74
PTPN22-211ENST00000538253 DCAF4Q8WV16 495 aa4.18□□□□□ -1.74
PTPN22-211ENST00000538253 WASF1Q92558 559 aa4.18□□□□□ -1.74
PTPN22-211ENST00000538253 MAP3K14Q99558 947 aa4.18□□□□□ -1.74
PTPN22-211ENST00000538253 MAST2Q6P0Q8 1798 aa4.18□□□□□ -1.74
PTPN22-211ENST00000538253 FLT1P17948 1338 aa4.18□□□□□ -1.74
PTPN22-211ENST00000538253 PASKQ96RG2 1323 aa4.18□□□□□ -1.74
PTPN22-211ENST00000538253 USP17L10C9JJH3 530 aa4.18□□□□□ -1.74
PTPN22-211ENST00000538253 MPHOSPH10O00566 681 aaKnown RBP4.18□□□□□ -1.74
PTPN22-211ENST00000538253 WDR46O15213 610 aaKnown RBP4.18□□□□□ -1.74
PTPN22-211ENST00000538253 SLC25A27O95847 323 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms