RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.67■□□□□ 0.1
CHFR-216ENST00000538235 ZMYM6O95789 1325 aa15.67■□□□□ 0.1
CHFR-216ENST00000538235 MINDY4BA8MYZ0 360 aa15.66■□□□□ 0.1
CHFR-216ENST00000538235 IRF6O14896 467 aa15.66■□□□□ 0.1
CHFR-216ENST00000538235 FGAP02671 866 aa15.66■□□□□ 0.1
CHFR-216ENST00000538235 PTPRAP18433 802 aa15.66■□□□□ 0.1
CHFR-216ENST00000538235 GNAT2P19087 354 aa15.66■□□□□ 0.1
CHFR-216ENST00000538235 RASA1P20936 1047 aa15.66■□□□□ 0.1
CHFR-216ENST00000538235 TDO2P48775 406 aa15.66■□□□□ 0.1
CHFR-216ENST00000538235 CDK8P49336 464 aa15.66■□□□□ 0.1
CHFR-216ENST00000538235 TTC6Q86TZ1 520 aa15.66■□□□□ 0.1
CHFR-216ENST00000538235 FOXP4Q8IVH2 680 aaPredicted RBP15.66■□□□□ 0.1
CHFR-216ENST00000538235 ESYT1Q9BSJ8 1104 aa15.66■□□□□ 0.1
CHFR-216ENST00000538235 RAD50Q92878 1312 aa15.66■□□□□ 0.1
CHFR-216ENST00000538235 IGF2BP3O00425 579 aaKnown RBP eCLIP15.65■□□□□ 0.1
CHFR-216ENST00000538235 PRDM1O75626 825 aa15.65■□□□□ 0.1
CHFR-216ENST00000538235 APPP05067 770 aa15.65■□□□□ 0.1
CHFR-216ENST00000538235 HAND2P61296 217 aa15.65■□□□□ 0.1
CHFR-216ENST00000538235 PPARAQ07869 468 aa15.65■□□□□ 0.1
CHFR-216ENST00000538235 ALX1Q15699 326 aa15.65■□□□□ 0.1
CHFR-216ENST00000538235 CRACR2BQ8N4Y2 399 aaPredicted RBP15.65■□□□□ 0.1
CHFR-216ENST00000538235 BRI3BPQ8WY22 251 aa15.65■□□□□ 0.1
CHFR-216ENST00000538235 HOOK2Q96ED9 719 aa15.65■□□□□ 0.1
CHFR-216ENST00000538235 SLC10A4Q96EP9 437 aa15.65■□□□□ 0.1
CHFR-216ENST00000538235 PTPN18Q99952 460 aa15.65■□□□□ 0.1
CHFR-216ENST00000538235 NAPBQ9H115 298 aa15.65■□□□□ 0.1
CHFR-216ENST00000538235 GTF3C3Q9Y5Q9 886 aa15.65■□□□□ 0.1
CHFR-216ENST00000538235 CSADQ9Y600 493 aa15.65■□□□□ 0.1
CHFR-216ENST00000538235 A0A0G2JMZ2 1700 aa15.65■□□□□ 0.1
CHFR-216ENST00000538235 CTNND1O60716 968 aaKnown RBP15.64■□□□□ 0.09
CHFR-216ENST00000538235 GH2P01242 217 aa15.64■□□□□ 0.09
CHFR-216ENST00000538235 ERO1BQ86YB8 467 aa15.64■□□□□ 0.09
CHFR-216ENST00000538235 SIAH1Q8IUQ4 282 aa15.64■□□□□ 0.09
CHFR-216ENST00000538235 LSG1Q9H089 658 aaKnown RBP15.64■□□□□ 0.09
CHFR-216ENST00000538235 NEDD4P46934 1319 aa15.64■□□□□ 0.09
CHFR-216ENST00000538235 COL11A1P12107 1806 aaPredicted RBP15.64■□□□□ 0.09
CHFR-216ENST00000538235 UNCXA6NJT0 531 aa15.63■□□□□ 0.09
CHFR-216ENST00000538235 HIP1O00291 1037 aa15.63■□□□□ 0.09
CHFR-216ENST00000538235 ECE1P42892 770 aa15.63■□□□□ 0.09
CHFR-216ENST00000538235 NOGQ13253 232 aa15.63■□□□□ 0.09
CHFR-216ENST00000538235 PPIL2Q13356 520 aa15.63■□□□□ 0.09
CHFR-216ENST00000538235 SEPT2Q15019 361 aa15.63■□□□□ 0.09
CHFR-216ENST00000538235 ACER1Q8TDN7 264 aa15.63■□□□□ 0.09
CHFR-216ENST00000538235 CCDC102AQ96A19 550 aa15.63■□□□□ 0.09
CHFR-216ENST00000538235 DSCC1Q9BVC3 393 aa15.63■□□□□ 0.09
CHFR-216ENST00000538235 R3HDMLQ9H3Y0 253 aa15.63■□□□□ 0.09
CHFR-216ENST00000538235 KCNH4Q9UQ05 1017 aa15.63■□□□□ 0.09
CHFR-216ENST00000538235 AFG3L2Q9Y4W6 797 aa15.63■□□□□ 0.09
CHFR-216ENST00000538235 CASP8AP2Q9UKL3 1982 aa15.62■□□□□ 0.09
CHFR-216ENST00000538235 A0A1W2PRG0 241 aa15.62■□□□□ 0.09
CHFR-216ENST00000538235 CDC45O75419 566 aa15.62■□□□□ 0.09
CHFR-216ENST00000538235 ZBTB48P10074 688 aaPredicted RBP15.62■□□□□ 0.09
CHFR-216ENST00000538235 KIAA1755Q5JYT7 1200 aa15.62■□□□□ 0.09
CHFR-216ENST00000538235 ANAPC4Q9UJX5 808 aa15.62■□□□□ 0.09
CHFR-216ENST00000538235 ZHX2Q9Y6X8 837 aa15.62■□□□□ 0.09
CHFR-216ENST00000538235 PLIN4Q96Q06 1357 aa15.62■□□□□ 0.09
CHFR-216ENST00000538235 IGKV6D-41A0A0C4DH26 115 aa15.61■□□□□ 0.09
CHFR-216ENST00000538235 TESPA1A2RU30 521 aaPredicted RBP15.61■□□□□ 0.09
CHFR-216ENST00000538235 FGRP09769 529 aa15.61■□□□□ 0.09
CHFR-216ENST00000538235 PPATQ06203 517 aa15.61■□□□□ 0.09
CHFR-216ENST00000538235 CERKLQ49MI3 558 aaPredicted RBP15.61■□□□□ 0.09
CHFR-216ENST00000538235 STOX1Q6ZVD7 989 aa15.61■□□□□ 0.09
CHFR-216ENST00000538235 FAM43AQ8N2R8 423 aa15.61■□□□□ 0.09
CHFR-216ENST00000538235 TSKSQ9UJT2 592 aa15.61■□□□□ 0.09
CHFR-216ENST00000538235 MGAMO43451 1857 aa15.61■□□□□ 0.09
CHFR-216ENST00000538235 TRIM75PA6NK02 468 aa15.6■□□□□ 0.09
CHFR-216ENST00000538235 MAP2K2P36507 400 aa15.6■□□□□ 0.09
CHFR-216ENST00000538235 ABCB5Q2M3G0 1257 aa15.6■□□□□ 0.09
CHFR-216ENST00000538235 FAM47AQ5JRC9 791 aa15.6■□□□□ 0.09
CHFR-216ENST00000538235 GPAT2Q6NUI2 795 aa15.6■□□□□ 0.09
CHFR-216ENST00000538235 RASGRP2Q7LDG7 609 aa15.6■□□□□ 0.09
CHFR-216ENST00000538235 WBP1LQ9NX94 342 aa15.6■□□□□ 0.09
CHFR-216ENST00000538235 SWAP70Q9UH65 585 aa15.6■□□□□ 0.09
CHFR-216ENST00000538235 CCL15-CCL14A0A0B4J2E2 113 aa15.59■□□□□ 0.09
CHFR-216ENST00000538235 A0A0G2JLL6 359 aaPredicted RBP15.59■□□□□ 0.09
CHFR-216ENST00000538235 NMT2O60551 498 aa15.59■□□□□ 0.09
CHFR-216ENST00000538235 CYP21A2P08686 494 aa15.59■□□□□ 0.09
CHFR-216ENST00000538235 HSPA1AP0DMV8 641 aaKnown RBP15.59■□□□□ 0.09
CHFR-216ENST00000538235 HSPA1BP0DMV9 641 aaKnown RBP15.59■□□□□ 0.09
CHFR-216ENST00000538235 TM4SF4P48230 202 aa15.59■□□□□ 0.09
CHFR-216ENST00000538235 CAP1Q01518 475 aa15.59■□□□□ 0.09
CHFR-216ENST00000538235 SPP2Q13103 211 aa15.59■□□□□ 0.09
CHFR-216ENST00000538235 CCL15Q16663 113 aa15.59■□□□□ 0.09
CHFR-216ENST00000538235 TREML2Q5T2D2 321 aa15.59■□□□□ 0.09
CHFR-216ENST00000538235 PRRT2Q7Z6L0 340 aaPredicted RBP15.59■□□□□ 0.09
CHFR-216ENST00000538235 TRIM34Q9BYJ4 488 aa15.59■□□□□ 0.09
CHFR-216ENST00000538235 NACAP1Q9BZK3 213 aa15.59■□□□□ 0.09
CHFR-216ENST00000538235 USP17L5A8MUK1 530 aa15.58■□□□□ 0.08
CHFR-216ENST00000538235 BTBD19C9JJ37 291 aa15.58■□□□□ 0.08
CHFR-216ENST00000538235 FOXN1O15353 648 aa15.58■□□□□ 0.08
CHFR-216ENST00000538235 ASNSP08243 561 aa15.58■□□□□ 0.08
CHFR-216ENST00000538235 MTMR2Q13614 643 aa15.58■□□□□ 0.08
CHFR-216ENST00000538235 POTEEQ6S8J3 1075 aa15.58■□□□□ 0.08
CHFR-216ENST00000538235 IFNL1Q8IU54 200 aa15.58■□□□□ 0.08
CHFR-216ENST00000538235 MAP4K1Q92918 833 aa15.58■□□□□ 0.08
CHFR-216ENST00000538235 DDRGK1Q96HY6 314 aa15.58■□□□□ 0.08
CHFR-216ENST00000538235 WDR18Q9BV38 432 aa15.58■□□□□ 0.08
CHFR-216ENST00000538235 PICK1Q9NRD5 415 aa15.58■□□□□ 0.08
CHFR-216ENST00000538235 RBM8AQ9Y5S9 174 aaKnown RBP15.58■□□□□ 0.08
CHFR-216ENST00000538235 ADGRA2Q96PE1 1338 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms