RNA–Protein interactions for RNA: ENST00000538129.1

DDB1-210, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-210ENST00000538129 C21orf2O43822 256 aa7.45□□□□□ -1.22
DDB1-210ENST00000538129 CSF1RP07333 972 aa7.45□□□□□ -1.22
DDB1-210ENST00000538129 TRIM27P14373 513 aa7.45□□□□□ -1.22
DDB1-210ENST00000538129 PHKA2P46019 1235 aa7.45□□□□□ -1.22
DDB1-210ENST00000538129 DPYDQ12882 1025 aa7.45□□□□□ -1.22
DDB1-210ENST00000538129 CCDC152Q4G0S7 254 aa7.45□□□□□ -1.22
DDB1-210ENST00000538129 C4orf17Q53FE4 359 aa7.45□□□□□ -1.22
DDB1-210ENST00000538129 SP8Q8IXZ3 490 aa7.45□□□□□ -1.22
DDB1-210ENST00000538129 RTKN2Q8IZC4 609 aa7.45□□□□□ -1.22
DDB1-210ENST00000538129 TTLL11Q8NHH1 800 aa7.45□□□□□ -1.22
DDB1-210ENST00000538129 TRERF1Q96PN7 1200 aa7.45□□□□□ -1.22
DDB1-210ENST00000538129 USP44Q9H0E7 712 aa7.45□□□□□ -1.22
DDB1-210ENST00000538129 TMX4Q9H1E5 349 aaPredicted RBP7.45□□□□□ -1.22
DDB1-210ENST00000538129 NEUROD4Q9HD90 331 aa7.45□□□□□ -1.22
DDB1-210ENST00000538129 WWC3Q9ULE0 1092 aa7.45□□□□□ -1.22
DDB1-210ENST00000538129 ZNF232Q9UNY5 417 aa7.45□□□□□ -1.22
DDB1-210ENST00000538129 MYH3P11055 1940 aa7.44□□□□□ -1.22
DDB1-210ENST00000538129 COL11A2P13942 1736 aaPredicted RBP7.44□□□□□ -1.22
DDB1-210ENST00000538129 LAMB2P55268 1798 aa7.44□□□□□ -1.22
DDB1-210ENST00000538129 STAU1O95793 577 aaKnown RBP7.44□□□□□ -1.22
DDB1-210ENST00000538129 NBPF7P0C2Y1 421 aaPredicted RBP7.44□□□□□ -1.22
DDB1-210ENST00000538129 PLA2G4AP47712 749 aa7.44□□□□□ -1.22
DDB1-210ENST00000538129 CTSWP56202 376 aa7.44□□□□□ -1.22
DDB1-210ENST00000538129 PSMA6P60900 246 aaKnown RBP7.44□□□□□ -1.22
DDB1-210ENST00000538129 RPS8P62241 208 aaKnown RBP7.44□□□□□ -1.22
DDB1-210ENST00000538129 FOXO4P98177 505 aa7.44□□□□□ -1.22
DDB1-210ENST00000538129 PDE4CQ08493 712 aa7.44□□□□□ -1.22
DDB1-210ENST00000538129 GRAPQ13588 217 aa7.44□□□□□ -1.22
DDB1-210ENST00000538129 ELOAQ14241 798 aaKnown RBP7.44□□□□□ -1.22
DDB1-210ENST00000538129 CRTC2Q53ET0 693 aaPredicted RBP7.44□□□□□ -1.22
DDB1-210ENST00000538129 TRIM22Q8IYM9 498 aa7.44□□□□□ -1.22
DDB1-210ENST00000538129 GRAPLQ8TC17 118 aaPredicted RBP7.44□□□□□ -1.22
DDB1-210ENST00000538129 NANOS1Q8WY41 292 aaKnown RBP7.44□□□□□ -1.22
DDB1-210ENST00000538129 GZF1Q9H116 711 aaPredicted RBP7.44□□□□□ -1.22
DDB1-210ENST00000538129 PHF24Q9UPV7 400 aa7.44□□□□□ -1.22
DDB1-210ENST00000538129 KIAA1024Q9UPX6 916 aa7.44□□□□□ -1.22
DDB1-210ENST00000538129 ATP6V0A2Q9Y487 856 aa7.44□□□□□ -1.22
DDB1-210ENST00000538129 GJA3Q9Y6H8 435 aa7.44□□□□□ -1.22
DDB1-210ENST00000538129 ABCC4O15439 1325 aa7.44□□□□□ -1.22
DDB1-210ENST00000538129 TNRC6CQ9HCJ0 1690 aaKnown RBP7.44□□□□□ -1.22
DDB1-210ENST00000538129 RTL9Q8NET4 1388 aa7.44□□□□□ -1.22
DDB1-210ENST00000538129 SERTM1A2A2V5 107 aa7.43□□□□□ -1.22
DDB1-210ENST00000538129 SFI1A8K8P3 1242 aa7.43□□□□□ -1.22
DDB1-210ENST00000538129 ATG7O95352 703 aa7.43□□□□□ -1.22
DDB1-210ENST00000538129 VEGFBP49765 207 aa7.43□□□□□ -1.22
DDB1-210ENST00000538129 NFX1Q12986 1120 aaKnown RBP7.43□□□□□ -1.22
DDB1-210ENST00000538129 CCDC93Q567U6 631 aa7.43□□□□□ -1.22
DDB1-210ENST00000538129 TMCO4Q5TGY1 634 aa7.43□□□□□ -1.22
DDB1-210ENST00000538129 FIGNL1Q6PIW4 674 aa7.43□□□□□ -1.22
DDB1-210ENST00000538129 SLC9A9Q8IVB4 645 aa7.43□□□□□ -1.22
DDB1-210ENST00000538129 DZIP1LQ8IYY4 767 aaKnown RBP7.43□□□□□ -1.22
DDB1-210ENST00000538129 TNS4Q8IZW8 715 aa7.43□□□□□ -1.22
DDB1-210ENST00000538129 VTI1AQ96AJ9 217 aa7.43□□□□□ -1.22
DDB1-210ENST00000538129 CDC5LQ99459 802 aaKnown RBP7.43□□□□□ -1.22
DDB1-210ENST00000538129 ZDHHC3Q9NYG2 299 aa7.43□□□□□ -1.22
DDB1-210ENST00000538129 NOVA2Q9UNW9 492 aaKnown RBP7.43□□□□□ -1.22
DDB1-210ENST00000538129 TAF1P21675 1872 aa7.43□□□□□ -1.22
DDB1-210ENST00000538129 CACNA1SQ13698 1873 aa7.43□□□□□ -1.22
DDB1-210ENST00000538129 PPP1R12BO60237 982 aaPredicted RBP7.42□□□□□ -1.22
DDB1-210ENST00000538129 GNAI3P08754 354 aa7.42□□□□□ -1.22
DDB1-210ENST00000538129 UBTFL1P0CB47 393 aaPredicted RBP7.42□□□□□ -1.22
DDB1-210ENST00000538129 VSIG8P0DPA2 414 aa7.42□□□□□ -1.22
DDB1-210ENST00000538129 LMNB1P20700 586 aa7.42□□□□□ -1.22
DDB1-210ENST00000538129 IFIT5Q13325 482 aaKnown RBP7.42□□□□□ -1.22
DDB1-210ENST00000538129 TEAD4Q15561 434 aa7.42□□□□□ -1.22
DDB1-210ENST00000538129 HIF1AQ16665 826 aa7.42□□□□□ -1.22
DDB1-210ENST00000538129 ARSJQ5FYB0 599 aaPredicted RBP7.42□□□□□ -1.22
DDB1-210ENST00000538129 EPHA10Q5JZY3 1008 aa7.42□□□□□ -1.22
DDB1-210ENST00000538129 LMBR1LQ6UX01 489 aa7.42□□□□□ -1.22
DDB1-210ENST00000538129 ANKRD18AQ8IVF6 992 aa7.42□□□□□ -1.22
DDB1-210ENST00000538129 FTSJ3Q8IY81 847 aaKnown RBP7.42□□□□□ -1.22
DDB1-210ENST00000538129 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.42□□□□□ -1.22
DDB1-210ENST00000538129 TSEN2Q8NCE0 465 aaKnown RBP7.42□□□□□ -1.22
DDB1-210ENST00000538129 CELF1Q92879 486 aaKnown RBP7.42□□□□□ -1.22
DDB1-210ENST00000538129 KAZALD1Q96I82 304 aa7.42□□□□□ -1.22
DDB1-210ENST00000538129 PSMD1Q99460 953 aa7.42□□□□□ -1.22
DDB1-210ENST00000538129 NUCKS1Q9H1E3 243 aaKnown RBP7.42□□□□□ -1.22
DDB1-210ENST00000538129 VPS33BQ9H267 617 aa7.42□□□□□ -1.22
DDB1-210ENST00000538129 TAOK3Q9H2K8 898 aa7.42□□□□□ -1.22
DDB1-210ENST00000538129 GREM2Q9H772 168 aa7.42□□□□□ -1.22
DDB1-210ENST00000538129 SEC31BQ9NQW1 1179 aa7.42□□□□□ -1.22
DDB1-210ENST00000538129 NSFL1CQ9UNZ2 370 aaKnown RBP7.42□□□□□ -1.22
DDB1-210ENST00000538129 GPC6Q9Y625 555 aaPredicted RBP7.42□□□□□ -1.22
DDB1-210ENST00000538129 LTBP3Q9NS15 1303 aa7.42□□□□□ -1.22
DDB1-210ENST00000538129 SBF1O95248 1867 aa7.42□□□□□ -1.22
DDB1-210ENST00000538129 FER1L6Q2WGJ9 1857 aa7.42□□□□□ -1.22
DDB1-210ENST00000538129 CCDC88AQ3V6T2 1871 aa7.41□□□□□ -1.22
DDB1-210ENST00000538129 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.41□□□□□ -1.22
DDB1-210ENST00000538129 ANKRD18BA2A2Z9 1011 aa7.41□□□□□ -1.22
DDB1-210ENST00000538129 NFKBIEO00221 500 aa7.41□□□□□ -1.22
DDB1-210ENST00000538129 NOS2P35228 1153 aa7.41□□□□□ -1.22
DDB1-210ENST00000538129 IGHMBP2P38935 993 aaKnown RBP7.41□□□□□ -1.22
DDB1-210ENST00000538129 FKBP4Q02790 459 aaKnown RBP eCLIP7.41□□□□□ -1.22
DDB1-210ENST00000538129 PDE3AQ14432 1141 aa7.41□□□□□ -1.22
DDB1-210ENST00000538129 SWI5Q1ZZU3 235 aa7.41□□□□□ -1.22
DDB1-210ENST00000538129 CCDC57Q2TAC2 916 aa7.41□□□□□ -1.22
DDB1-210ENST00000538129 RABL6Q3YEC7 729 aaPredicted RBP7.41□□□□□ -1.22
DDB1-210ENST00000538129 VWA5B2Q8N398 1253 aa7.41□□□□□ -1.22
DDB1-210ENST00000538129 TMEM57Q8N5G2 664 aa7.41□□□□□ -1.22
DDB1-210ENST00000538129 SUCLG2Q96I99 432 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms