RNA–Protein interactions for RNA: ENST00000538036.1

VPS37C-204, Transcript of VPS37C, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37C, Length 506 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37C-204ENST00000538036 RRP1BQ14684 758 aaKnown RBP12.59□□□□□ -0.39
VPS37C-204ENST00000538036 TBC1D9Q6ZT07 1266 aa12.59□□□□□ -0.39
VPS37C-204ENST00000538036 CCAR1Q8IX12 1150 aaKnown RBP12.59□□□□□ -0.39
VPS37C-204ENST00000538036 TRMT2AQ8IZ69 625 aaKnown RBP12.59□□□□□ -0.39
VPS37C-204ENST00000538036 MEIS3Q99687 375 aa12.59□□□□□ -0.39
VPS37C-204ENST00000538036 MTMR10Q9NXD2 777 aa12.59□□□□□ -0.39
VPS37C-204ENST00000538036 RGS2P41220 211 aa12.58□□□□□ -0.4
VPS37C-204ENST00000538036 PPP4CP60510 307 aa12.58□□□□□ -0.4
VPS37C-204ENST00000538036 USP6NLQ92738 828 aa12.58□□□□□ -0.4
VPS37C-204ENST00000538036 RBPJLQ9UBG7 517 aa12.58□□□□□ -0.4
VPS37C-204ENST00000538036 LOC285556D6RIA3 1793 aa12.58□□□□□ -0.4
VPS37C-204ENST00000538036 PFASO15067 1338 aa12.58□□□□□ -0.4
VPS37C-204ENST00000538036 GLRX3O76003 335 aaKnown RBP12.57□□□□□ -0.4
VPS37C-204ENST00000538036 CACNB2Q08289 660 aaPredicted RBP12.57□□□□□ -0.4
VPS37C-204ENST00000538036 MORN1Q5T089 497 aa12.57□□□□□ -0.4
VPS37C-204ENST00000538036 LHX8Q68G74 356 aa12.57□□□□□ -0.4
VPS37C-204ENST00000538036 FAM109BQ6ICB4 259 aaPredicted RBP12.57□□□□□ -0.4
VPS37C-204ENST00000538036 NAA16Q6N069 864 aaPredicted RBP12.57□□□□□ -0.4
VPS37C-204ENST00000538036 ATF7IPQ6VMQ6 1270 aa12.57□□□□□ -0.4
VPS37C-204ENST00000538036 PLEKHH3Q7Z736 793 aa12.57□□□□□ -0.4
VPS37C-204ENST00000538036 SH3RF3Q8TEJ3 882 aaPredicted RBP12.57□□□□□ -0.4
VPS37C-204ENST00000538036 TRIM34Q9BYJ4 488 aa12.57□□□□□ -0.4
VPS37C-204ENST00000538036 TXNRD2Q9NNW7 524 aa12.57□□□□□ -0.4
VPS37C-204ENST00000538036 MCAMP43121 646 aa12.56□□□□□ -0.4
VPS37C-204ENST00000538036 ERVK-9P63128 1117 aa12.56□□□□□ -0.4
VPS37C-204ENST00000538036 ERVK-24P63145 666 aa12.56□□□□□ -0.4
VPS37C-204ENST00000538036 CCNA1P78396 465 aa12.56□□□□□ -0.4
VPS37C-204ENST00000538036 G3BP1Q13283 466 aaKnown RBP eCLIP12.56□□□□□ -0.4
VPS37C-204ENST00000538036 PI16Q6UXB8 463 aa12.56□□□□□ -0.4
VPS37C-204ENST00000538036 Q7L0L9 218 aa12.56□□□□□ -0.4
VPS37C-204ENST00000538036 GPR142Q7Z601 462 aa12.56□□□□□ -0.4
VPS37C-204ENST00000538036 CRACR2BQ8N4Y2 399 aaPredicted RBP12.56□□□□□ -0.4
VPS37C-204ENST00000538036 CDCA7LQ96GN5 454 aa12.56□□□□□ -0.4
VPS37C-204ENST00000538036 APBA2Q99767 749 aa12.56□□□□□ -0.4
VPS37C-204ENST00000538036 ALPK3Q96L96 1907 aa12.55□□□□□ -0.4
VPS37C-204ENST00000538036 MSCO60682 206 aa12.55□□□□□ -0.4
VPS37C-204ENST00000538036 Q3C1V9 767 aa12.55□□□□□ -0.4
VPS37C-204ENST00000538036 USP17L2Q6R6M4 530 aa12.55□□□□□ -0.4
VPS37C-204ENST00000538036 TGFBRAP1Q8WUH2 860 aa12.55□□□□□ -0.4
VPS37C-204ENST00000538036 GPR108Q9NPR9 543 aa12.55□□□□□ -0.4
VPS37C-204ENST00000538036 AATFQ9NY61 560 aaKnown RBP eCLIP12.55□□□□□ -0.4
VPS37C-204ENST00000538036 ZBTB21Q9ULJ3 1066 aa12.55□□□□□ -0.4
VPS37C-204ENST00000538036 RABGAP1Q9Y3P9 1069 aa12.55□□□□□ -0.4
VPS37C-204ENST00000538036 POTEB2H3BUK9 544 aa12.54□□□□□ -0.4
VPS37C-204ENST00000538036 IPO8O15397 1037 aaKnown RBP12.54□□□□□ -0.4
VPS37C-204ENST00000538036 GNAI2P04899 355 aa12.54□□□□□ -0.4
VPS37C-204ENST00000538036 HLA-DOAP06340 250 aa12.54□□□□□ -0.4
VPS37C-204ENST00000538036 CCND3P30281 292 aaPredicted RBP12.54□□□□□ -0.4
VPS37C-204ENST00000538036 JAG1P78504 1218 aa12.54□□□□□ -0.4
VPS37C-204ENST00000538036 MAP2K5Q13163 448 aa12.54□□□□□ -0.4
VPS37C-204ENST00000538036 LRRC26Q2I0M4 334 aa12.54□□□□□ -0.4
VPS37C-204ENST00000538036 CCDC158Q5M9N0 1113 aa12.54□□□□□ -0.4
VPS37C-204ENST00000538036 MFSD14CQ5VZR4 134 aa12.54□□□□□ -0.4
VPS37C-204ENST00000538036 CERS3Q8IU89 383 aa12.54□□□□□ -0.4
VPS37C-204ENST00000538036 MAPKAPK5Q8IW41 473 aa12.54□□□□□ -0.4
VPS37C-204ENST00000538036 EDC3Q96F86 508 aaKnown RBP12.54□□□□□ -0.4
VPS37C-204ENST00000538036 ZNF512BQ96KM6 892 aaPredicted RBP12.54□□□□□ -0.4
VPS37C-204ENST00000538036 LBHD1Q9BQE6 289 aaPredicted RBP12.54□□□□□ -0.4
VPS37C-204ENST00000538036 PORCNQ9H237 461 aa12.54□□□□□ -0.4
VPS37C-204ENST00000538036 DNAJC18Q9H819 358 aa12.54□□□□□ -0.4
VPS37C-204ENST00000538036 CWC22Q9HCG8 908 aaKnown RBP12.54□□□□□ -0.4
VPS37C-204ENST00000538036 EMILIN3Q9NT22 766 aa12.54□□□□□ -0.4
VPS37C-204ENST00000538036 PALD1Q9ULE6 856 aa12.54□□□□□ -0.4
VPS37C-204ENST00000538036 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.54□□□□□ -0.4
VPS37C-204ENST00000538036 FLT1P17948 1338 aa12.54□□□□□ -0.4
VPS37C-204ENST00000538036 DDX60LQ5H9U9 1706 aaKnown RBP12.54□□□□□ -0.4
VPS37C-204ENST00000538036 SLC15A5A6NIM6 579 aa12.53□□□□□ -0.4
VPS37C-204ENST00000538036 USP17L15C9J2P7 530 aa12.53□□□□□ -0.4
VPS37C-204ENST00000538036 USP17L13C9JLJ4 530 aa12.53□□□□□ -0.4
VPS37C-204ENST00000538036 USP17L11C9JVI0 530 aa12.53□□□□□ -0.4
VPS37C-204ENST00000538036 USP17L18D6R9N7 530 aa12.53□□□□□ -0.4
VPS37C-204ENST00000538036 USP17L22D6RA61 530 aa12.53□□□□□ -0.4
VPS37C-204ENST00000538036 USP17L17D6RBQ6 530 aa12.53□□□□□ -0.4
VPS37C-204ENST00000538036 USP17L19D6RCP7 530 aa12.53□□□□□ -0.4
VPS37C-204ENST00000538036 USP17L20D6RJB6 530 aa12.53□□□□□ -0.4
VPS37C-204ENST00000538036 RARSP54136 660 aaKnown RBP12.53□□□□□ -0.4
VPS37C-204ENST00000538036 USP14P54578 494 aa12.53□□□□□ -0.4
VPS37C-204ENST00000538036 USP17L24Q0WX57 530 aa12.53□□□□□ -0.4
VPS37C-204ENST00000538036 CCL14Q16627 93 aa12.53□□□□□ -0.4
VPS37C-204ENST00000538036 TMED8Q6PL24 325 aaPredicted RBP12.53□□□□□ -0.4
VPS37C-204ENST00000538036 C12orf42Q96LP6 360 aa12.53□□□□□ -0.4
VPS37C-204ENST00000538036 PAGR1Q9BTK6 254 aa12.53□□□□□ -0.4
VPS37C-204ENST00000538036 PEX10O60683 326 aa12.52□□□□□ -0.41
VPS37C-204ENST00000538036 GDF11O95390 407 aa12.52□□□□□ -0.41
VPS37C-204ENST00000538036 CENPBP07199 599 aaPredicted RBP12.52□□□□□ -0.41
VPS37C-204ENST00000538036 HOXC6P09630 235 aa12.52□□□□□ -0.41
VPS37C-204ENST00000538036 MDM2Q00987 491 aaPredicted RBP12.52□□□□□ -0.41
VPS37C-204ENST00000538036 TTC39AQ5SRH9 613 aa12.52□□□□□ -0.41
VPS37C-204ENST00000538036 TATDN1Q6P1N9 297 aa12.52□□□□□ -0.41
VPS37C-204ENST00000538036 LBX2Q6XYB7 198 aa12.52□□□□□ -0.41
VPS37C-204ENST00000538036 LPAR1Q92633 364 aa12.52□□□□□ -0.41
VPS37C-204ENST00000538036 PLXNB2O15031 1838 aa12.52□□□□□ -0.41
VPS37C-204ENST00000538036 PTPREP23469 700 aa12.51□□□□□ -0.41
VPS37C-204ENST00000538036 ATP2B2Q01814 1243 aa12.51□□□□□ -0.41
VPS37C-204ENST00000538036 POTEEQ6S8J3 1075 aa12.51□□□□□ -0.41
VPS37C-204ENST00000538036 CATSPERGQ6ZRH7 1159 aa12.51□□□□□ -0.41
VPS37C-204ENST00000538036 ADGRA1Q86SQ6 560 aa12.51□□□□□ -0.41
VPS37C-204ENST00000538036 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.51□□□□□ -0.41
VPS37C-204ENST00000538036 FEZ1Q99689 392 aa12.51□□□□□ -0.41
VPS37C-204ENST00000538036 SENP6Q9GZR1 1112 aaPredicted RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms