RNA–Protein interactions for RNA: ENST00000537849.1

SPARC-207, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 3

Gene SPARC, Length 218 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-207ENST00000537849 HIRAP54198 1017 aaPredicted RBP13.78□□□□□ -0.2
SPARC-207ENST00000537849 RCSD1Q6JBY9 416 aa13.78□□□□□ -0.2
SPARC-207ENST00000537849 CCDC83Q8IWF9 413 aa13.78□□□□□ -0.2
SPARC-207ENST00000537849 ENAHQ8N8S7 591 aaPredicted RBP13.78□□□□□ -0.2
SPARC-207ENST00000537849 NEDD1Q8NHV4 660 aa13.78□□□□□ -0.2
SPARC-207ENST00000537849 DNAJC18Q9H819 358 aa13.78□□□□□ -0.2
SPARC-207ENST00000537849 ZNF287Q9HBT7 754 aa13.78□□□□□ -0.2
SPARC-207ENST00000537849 SWAP70Q9UH65 585 aa13.78□□□□□ -0.2
SPARC-207ENST00000537849 TAOK2Q9UL54 1235 aa13.78□□□□□ -0.2
SPARC-207ENST00000537849 ASTN2O75129 1339 aaPredicted RBP13.78□□□□□ -0.2
SPARC-207ENST00000537849 KLF18A0A0U1RQI7 1052 aa13.77□□□□□ -0.21
SPARC-207ENST00000537849 NOVP48745 357 aa13.77□□□□□ -0.21
SPARC-207ENST00000537849 MAP3K10Q02779 954 aa13.77□□□□□ -0.21
SPARC-207ENST00000537849 SCRN1Q12765 414 aa13.77□□□□□ -0.21
SPARC-207ENST00000537849 STK3Q13188 491 aa13.77□□□□□ -0.21
SPARC-207ENST00000537849 WTAPQ15007 396 aa13.77□□□□□ -0.21
SPARC-207ENST00000537849 KIF4BQ2VIQ3 1234 aa13.77□□□□□ -0.21
SPARC-207ENST00000537849 IQCA1Q86XH1 822 aa13.77□□□□□ -0.21
SPARC-207ENST00000537849 ZSCAN29Q8IWY8 852 aaPredicted RBP13.77□□□□□ -0.21
SPARC-207ENST00000537849 TRPM4Q8TD43 1214 aa13.77□□□□□ -0.21
SPARC-207ENST00000537849 GTF3C6Q969F1 213 aa13.77□□□□□ -0.21
SPARC-207ENST00000537849 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.77□□□□□ -0.21
SPARC-207ENST00000537849 SLKQ9H2G2 1235 aaPredicted RBP13.77□□□□□ -0.21
SPARC-207ENST00000537849 VEZTQ9HBM0 779 aa13.77□□□□□ -0.21
SPARC-207ENST00000537849 CWC22Q9HCG8 908 aaKnown RBP13.77□□□□□ -0.21
SPARC-207ENST00000537849 TNKSO95271 1327 aa13.76□□□□□ -0.21
SPARC-207ENST00000537849 TSPY2A6NKD2 308 aa13.76□□□□□ -0.21
SPARC-207ENST00000537849 NMT2O60551 498 aa13.76□□□□□ -0.21
SPARC-207ENST00000537849 HSP90AA1P07900 732 aaKnown RBP13.76□□□□□ -0.21
SPARC-207ENST00000537849 SART3Q15020 963 aaKnown RBP13.76□□□□□ -0.21
SPARC-207ENST00000537849 CCDC178Q5BJE1 867 aa13.76□□□□□ -0.21
SPARC-207ENST00000537849 DPY19L2Q6NUT2 758 aa13.76□□□□□ -0.21
SPARC-207ENST00000537849 TATDN1Q6P1N9 297 aa13.76□□□□□ -0.21
SPARC-207ENST00000537849 APOA5Q6Q788 366 aa13.76□□□□□ -0.21
SPARC-207ENST00000537849 UBAC1Q9BSL1 405 aa13.76□□□□□ -0.21
SPARC-207ENST00000537849 TMEM39BQ9GZU3 492 aa13.76□□□□□ -0.21
SPARC-207ENST00000537849 FAM217BQ9NTX9 383 aaPredicted RBP13.76□□□□□ -0.21
SPARC-207ENST00000537849 HACL1Q9UJ83 578 aa13.76□□□□□ -0.21
SPARC-207ENST00000537849 ZC3H4Q9UPT8 1303 aaKnown RBP13.75□□□□□ -0.21
SPARC-207ENST00000537849 IGKV6D-41A0A0C4DH26 115 aa13.75□□□□□ -0.21
SPARC-207ENST00000537849 ERICH2A1L162 156 aa13.75□□□□□ -0.21
SPARC-207ENST00000537849 TBC1D12O60347 775 aa13.75□□□□□ -0.21
SPARC-207ENST00000537849 DTNBO60941 627 aa13.75□□□□□ -0.21
SPARC-207ENST00000537849 CTDNEP1O95476 244 aa13.75□□□□□ -0.21
SPARC-207ENST00000537849 TSPY3P0CV98 308 aa13.75□□□□□ -0.21
SPARC-207ENST00000537849 TSPY8P0CW00 308 aa13.75□□□□□ -0.21
SPARC-207ENST00000537849 AKR1B1P15121 316 aa13.75□□□□□ -0.21
SPARC-207ENST00000537849 CCT2P78371 535 aaKnown RBP13.75□□□□□ -0.21
SPARC-207ENST00000537849 RASA3Q14644 834 aa13.75□□□□□ -0.21
SPARC-207ENST00000537849 DGKHQ86XP1 1220 aa13.75□□□□□ -0.21
SPARC-207ENST00000537849 CDAN1Q8IWY9 1227 aa13.75□□□□□ -0.21
SPARC-207ENST00000537849 L3MBTL3Q96JM7 780 aaPredicted RBP13.75□□□□□ -0.21
SPARC-207ENST00000537849 CCDC17Q96LX7 622 aa13.75□□□□□ -0.21
SPARC-207ENST00000537849 TEPSINQ96N21 525 aa13.75□□□□□ -0.21
SPARC-207ENST00000537849 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.75□□□□□ -0.21
SPARC-207ENST00000537849 UTRNP46939 3433 aa13.75□□□□□ -0.21
SPARC-207ENST00000537849 GLTPD2A6NH11 291 aa13.74□□□□□ -0.21
SPARC-207ENST00000537849 CCDC69A6NI79 296 aa13.74□□□□□ -0.21
SPARC-207ENST00000537849 FAM196BA6NMK8 535 aa13.74□□□□□ -0.21
SPARC-207ENST00000537849 TNNI2P48788 182 aa13.74□□□□□ -0.21
SPARC-207ENST00000537849 RRP1BQ14684 758 aaKnown RBP13.74□□□□□ -0.21
SPARC-207ENST00000537849 NFXL1Q6ZNB6 911 aa13.74□□□□□ -0.21
SPARC-207ENST00000537849 CSRNP1Q96S65 589 aa13.74□□□□□ -0.21
SPARC-207ENST00000537849 NCOA5Q9HCD5 579 aaKnown RBP13.74□□□□□ -0.21
SPARC-207ENST00000537849 ADARB2Q9NS39 739 aaKnown RBP13.74□□□□□ -0.21
SPARC-207ENST00000537849 SCAF8Q9UPN6 1271 aaKnown RBP13.74□□□□□ -0.21
SPARC-207ENST00000537849 SLC12A7Q9Y666 1083 aa13.74□□□□□ -0.21
SPARC-207ENST00000537849 GREB1LQ9C091 1923 aaPredicted RBP13.73□□□□□ -0.21
SPARC-207ENST00000537849 POTECB2RU33 542 aa13.73□□□□□ -0.21
SPARC-207ENST00000537849 ZBTB43O43298 467 aa13.73□□□□□ -0.21
SPARC-207ENST00000537849 CDC27P30260 824 aa13.73□□□□□ -0.21
SPARC-207ENST00000537849 ADD1P35611 737 aaKnown RBP13.73□□□□□ -0.21
SPARC-207ENST00000537849 RCAN1P53805 252 aa13.73□□□□□ -0.21
SPARC-207ENST00000537849 JAG1P78504 1218 aa13.73□□□□□ -0.21
SPARC-207ENST00000537849 TROAPQ12815 778 aa13.73□□□□□ -0.21
SPARC-207ENST00000537849 CERKLQ49MI3 558 aaPredicted RBP13.73□□□□□ -0.21
SPARC-207ENST00000537849 IFIT1BQ5T764 474 aaKnown RBP13.73□□□□□ -0.21
SPARC-207ENST00000537849 RAB11FIP4Q86YS3 637 aa13.73□□□□□ -0.21
SPARC-207ENST00000537849 ZNF654Q8IZM8 581 aa13.73□□□□□ -0.21
SPARC-207ENST00000537849 CRACR2BQ8N4Y2 399 aaPredicted RBP13.73□□□□□ -0.21
SPARC-207ENST00000537849 SMARCC2Q8TAQ2 1214 aa13.73□□□□□ -0.21
SPARC-207ENST00000537849 LLPHQ9BRT6 129 aaKnown RBP13.73□□□□□ -0.21
SPARC-207ENST00000537849 CHMP5Q9NZZ3 219 aa13.73□□□□□ -0.21
SPARC-207ENST00000537849 HERC5Q9UII4 1024 aaKnown RBP13.73□□□□□ -0.21
SPARC-207ENST00000537849 CIZ1Q9ULV3 898 aaPredicted RBP13.73□□□□□ -0.21
SPARC-207ENST00000537849 NAP1L2Q9ULW6 460 aaPredicted RBP13.73□□□□□ -0.21
SPARC-207ENST00000537849 SMC3Q9UQE7 1217 aa13.73□□□□□ -0.21
SPARC-207ENST00000537849 NID2Q14112 1375 aa13.72□□□□□ -0.21
SPARC-207ENST00000537849 PLIN4Q96Q06 1357 aa13.72□□□□□ -0.21
SPARC-207ENST00000537849 GOLGA8BA8MQT2 603 aa13.72□□□□□ -0.21
SPARC-207ENST00000537849 RXRAP19793 462 aa13.72□□□□□ -0.21
SPARC-207ENST00000537849 LMOD1P29536 600 aaPredicted RBP13.72□□□□□ -0.21
SPARC-207ENST00000537849 TNFAIP1Q13829 316 aa13.72□□□□□ -0.21
SPARC-207ENST00000537849 NTRK3Q16288 839 aa13.72□□□□□ -0.21
SPARC-207ENST00000537849 ANGEL2Q5VTE6 544 aaKnown RBP13.72□□□□□ -0.21
SPARC-207ENST00000537849 SYNE3Q6ZMZ3 975 aa13.72□□□□□ -0.21
SPARC-207ENST00000537849 NSUN7Q8NE18 718 aaKnown RBP13.72□□□□□ -0.21
SPARC-207ENST00000537849 CHMP4CQ96CF2 233 aa13.72□□□□□ -0.21
SPARC-207ENST00000537849 CEP95Q96GE4 821 aa13.72□□□□□ -0.21
SPARC-207ENST00000537849 TMEM47Q9BQJ4 181 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms