RNA–Protein interactions for RNA: ENST00000537842.5

TNFRSF1A-210, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 404 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-210ENST00000537842 ENOX2Q16206 610 aaKnown RBP3.48□□□□□ -1.85
TNFRSF1A-210ENST00000537842 SPRED3Q2MJR0 410 aa3.48□□□□□ -1.85
TNFRSF1A-210ENST00000537842 MEX3CQ5U5Q3 659 aaKnown RBP3.48□□□□□ -1.85
TNFRSF1A-210ENST00000537842 LINC00114Q6XXX2 140 aa3.48□□□□□ -1.85
TNFRSF1A-210ENST00000537842 DTHD1Q6ZMT9 781 aa3.48□□□□□ -1.85
TNFRSF1A-210ENST00000537842 PTF1AQ7RTS3 328 aa3.48□□□□□ -1.85
TNFRSF1A-210ENST00000537842 GALNT12Q8IXK2 581 aa3.48□□□□□ -1.85
TNFRSF1A-210ENST00000537842 FAM177A1Q8N128 213 aaPredicted RBP3.48□□□□□ -1.85
TNFRSF1A-210ENST00000537842 ALKBH8Q96BT7 664 aaKnown RBP3.48□□□□□ -1.85
TNFRSF1A-210ENST00000537842 PANK3Q9H999 370 aa3.48□□□□□ -1.85
TNFRSF1A-210ENST00000537842 RNF19AQ9NV58 838 aa3.48□□□□□ -1.85
TNFRSF1A-210ENST00000537842 AKAP2Q9Y2D5 859 aa3.48□□□□□ -1.85
TNFRSF1A-210ENST00000537842 PPME1Q9Y570 386 aa3.48□□□□□ -1.85
TNFRSF1A-210ENST00000537842 KIF7Q2M1P5 1343 aa3.47□□□□□ -1.85
TNFRSF1A-210ENST00000537842 SHPRHQ149N8 1683 aa3.47□□□□□ -1.85
TNFRSF1A-210ENST00000537842 CAMTA1Q9Y6Y1 1673 aa3.47□□□□□ -1.85
TNFRSF1A-210ENST00000537842 A0A0A0MRY4 1105 aa3.47□□□□□ -1.85
TNFRSF1A-210ENST00000537842 H3BRJ5 948 aa3.47□□□□□ -1.85
TNFRSF1A-210ENST00000537842 DDX3YO15523 660 aaKnown RBP3.47□□□□□ -1.85
TNFRSF1A-210ENST00000537842 GDF11O95390 407 aa3.47□□□□□ -1.85
TNFRSF1A-210ENST00000537842 GRIA4P48058 902 aa3.47□□□□□ -1.85
TNFRSF1A-210ENST00000537842 RBM6P78332 1123 aaKnown RBP3.47□□□□□ -1.85
TNFRSF1A-210ENST00000537842 TMF1P82094 1093 aa3.47□□□□□ -1.85
TNFRSF1A-210ENST00000537842 TAGLNQ01995 201 aaKnown RBP3.47□□□□□ -1.85
TNFRSF1A-210ENST00000537842 RASSF7Q02833 373 aa3.47□□□□□ -1.85
TNFRSF1A-210ENST00000537842 GSTM4Q03013 218 aa3.47□□□□□ -1.85
TNFRSF1A-210ENST00000537842 IKBKEQ14164 716 aa3.47□□□□□ -1.85
TNFRSF1A-210ENST00000537842 GRM2Q14416 872 aa3.47□□□□□ -1.85
TNFRSF1A-210ENST00000537842 DSC3Q14574 896 aa3.47□□□□□ -1.85
TNFRSF1A-210ENST00000537842 RRS1Q15050 365 aaKnown RBP3.47□□□□□ -1.85
TNFRSF1A-210ENST00000537842 VPS72Q15906 364 aa3.47□□□□□ -1.85
TNFRSF1A-210ENST00000537842 GRIK5Q16478 980 aa3.47□□□□□ -1.85
TNFRSF1A-210ENST00000537842 ZNF772Q68DY9 489 aaPredicted RBP3.47□□□□□ -1.85
TNFRSF1A-210ENST00000537842 NXPE4Q6UWF7 544 aa3.47□□□□□ -1.85
TNFRSF1A-210ENST00000537842 UBASH3BQ8TF42 649 aa3.47□□□□□ -1.85
TNFRSF1A-210ENST00000537842 DUSP9Q99956 384 aaKnown RBP3.47□□□□□ -1.85
TNFRSF1A-210ENST00000537842 BCO2Q9BYV7 579 aa3.47□□□□□ -1.85
TNFRSF1A-210ENST00000537842 MUC3BQ9H195 1237 aa3.47□□□□□ -1.85
TNFRSF1A-210ENST00000537842 DNAJC25Q9H1X3 360 aa3.47□□□□□ -1.85
TNFRSF1A-210ENST00000537842 MRS2Q9HD23 443 aa3.47□□□□□ -1.85
TNFRSF1A-210ENST00000537842 VTI1BQ9UEU0 232 aa3.47□□□□□ -1.85
TNFRSF1A-210ENST00000537842 SPG7Q9UQ90 795 aa3.47□□□□□ -1.85
TNFRSF1A-210ENST00000537842 ARHGEF10O15013 1369 aa3.47□□□□□ -1.85
TNFRSF1A-210ENST00000537842 USP31Q70CQ4 1352 aa3.47□□□□□ -1.85
TNFRSF1A-210ENST00000537842 KTN1Q86UP2 1357 aaKnown RBP3.47□□□□□ -1.85
TNFRSF1A-210ENST00000537842 SPATA31A5Q5VU36 1347 aa3.46□□□□□ -1.85
TNFRSF1A-210ENST00000537842 SPATA31A7Q8IWB4 1347 aa3.46□□□□□ -1.85
TNFRSF1A-210ENST00000537842 TOPAZ1Q8N9V7 1692 aa3.46□□□□□ -1.85
TNFRSF1A-210ENST00000537842 ALS2Q96Q42 1657 aa3.46□□□□□ -1.85
TNFRSF1A-210ENST00000537842 QRICH2Q9H0J4 1663 aa3.46□□□□□ -1.85
TNFRSF1A-210ENST00000537842 RGS12O14924 1447 aa3.46□□□□□ -1.86
TNFRSF1A-210ENST00000537842 COL22A1Q8NFW1 1626 aaPredicted RBP3.46□□□□□ -1.86
TNFRSF1A-210ENST00000537842 A0A096LPE4 126 aa3.46□□□□□ -1.86
TNFRSF1A-210ENST00000537842 A0A1W2PPZ6 126 aa3.46□□□□□ -1.86
TNFRSF1A-210ENST00000537842 SPATA31C1P0DKV0 1188 aa3.46□□□□□ -1.86
TNFRSF1A-210ENST00000537842 TCF3P15923 654 aa3.46□□□□□ -1.86
TNFRSF1A-210ENST00000537842 PCDH1Q08174 1060 aa3.46□□□□□ -1.86
TNFRSF1A-210ENST00000537842 PSMD2Q13200 908 aa3.46□□□□□ -1.86
TNFRSF1A-210ENST00000537842 HGSNATQ68CP4 663 aa3.46□□□□□ -1.86
TNFRSF1A-210ENST00000537842 ALG1LQ6GMV1 187 aa3.46□□□□□ -1.86
TNFRSF1A-210ENST00000537842 GPAT2Q6NUI2 795 aa3.46□□□□□ -1.86
TNFRSF1A-210ENST00000537842 TPTE2Q6XPS3 522 aa3.46□□□□□ -1.86
TNFRSF1A-210ENST00000537842 ACAD11Q709F0 780 aa3.46□□□□□ -1.86
TNFRSF1A-210ENST00000537842 FMR1NBQ8N0W7 255 aaPredicted RBP3.46□□□□□ -1.86
TNFRSF1A-210ENST00000537842 AGGF1Q8N302 714 aaeCLIP3.46□□□□□ -1.86
TNFRSF1A-210ENST00000537842 TMEM102Q8N9M5 508 aaPredicted RBP3.46□□□□□ -1.86
TNFRSF1A-210ENST00000537842 BSNDQ8WZ55 320 aa3.46□□□□□ -1.86
TNFRSF1A-210ENST00000537842 NXPE3Q969Y0 559 aa3.46□□□□□ -1.86
TNFRSF1A-210ENST00000537842 DCAF5Q96JK2 942 aa3.46□□□□□ -1.86
TNFRSF1A-210ENST00000537842 TCF12Q99081 682 aa3.46□□□□□ -1.86
TNFRSF1A-210ENST00000537842 ZC3H12CQ9C0D7 883 aaKnown RBP3.46□□□□□ -1.86
TNFRSF1A-210ENST00000537842 ABCB6Q9NP58 842 aa3.46□□□□□ -1.86
TNFRSF1A-210ENST00000537842 PRDM11Q9NQV5 511 aa3.46□□□□□ -1.86
TNFRSF1A-210ENST00000537842 TRPC5Q9UL62 973 aaPredicted RBP3.46□□□□□ -1.86
TNFRSF1A-210ENST00000537842 TTF2Q9UNY4 1162 aaKnown RBP3.46□□□□□ -1.86
TNFRSF1A-210ENST00000537842 CPDO75976 1380 aa3.46□□□□□ -1.86
TNFRSF1A-210ENST00000537842 EIF3AQ14152 1382 aaKnown RBP3.46□□□□□ -1.86
TNFRSF1A-210ENST00000537842 MAP3K19Q56UN5 1328 aa3.45□□□□□ -1.86
TNFRSF1A-210ENST00000537842 SPATA31A1Q5TZJ5 1347 aa3.45□□□□□ -1.86
TNFRSF1A-210ENST00000537842 TTC21AQ8NDW8 1320 aa3.45□□□□□ -1.86
TNFRSF1A-210ENST00000537842 OVOS2A0A0J9YW53 1432 aa3.45□□□□□ -1.86
TNFRSF1A-210ENST00000537842 OVOS2Q6IE36 1432 aa3.45□□□□□ -1.86
TNFRSF1A-210ENST00000537842 NFAT5O94916 1531 aa3.45□□□□□ -1.86
TNFRSF1A-210ENST00000537842 MARF1Q9Y4F3 1742 aaKnown RBP3.45□□□□□ -1.86
TNFRSF1A-210ENST00000537842 NFKBIEO00221 500 aa3.45□□□□□ -1.86
TNFRSF1A-210ENST00000537842 FSCN2O14926 492 aa3.45□□□□□ -1.86
TNFRSF1A-210ENST00000537842 DEAF1O75398 565 aaPredicted RBP3.45□□□□□ -1.86
TNFRSF1A-210ENST00000537842 PRPF40AO75400 957 aaKnown RBP3.45□□□□□ -1.86
TNFRSF1A-210ENST00000537842 RECKO95980 971 aa3.45□□□□□ -1.86
TNFRSF1A-210ENST00000537842 USP17L7P0C7H9 530 aa3.45□□□□□ -1.86
TNFRSF1A-210ENST00000537842 ELNP15502 786 aa3.45□□□□□ -1.86
TNFRSF1A-210ENST00000537842 GLB1P16278 677 aa3.45□□□□□ -1.86
TNFRSF1A-210ENST00000537842 CHRNA4P43681 627 aa3.45□□□□□ -1.86
TNFRSF1A-210ENST00000537842 TNNT2P45379 298 aaPredicted RBP3.45□□□□□ -1.86
TNFRSF1A-210ENST00000537842 BAG6P46379 1132 aa3.45□□□□□ -1.86
TNFRSF1A-210ENST00000537842 ARL4DP49703 201 aa3.45□□□□□ -1.86
TNFRSF1A-210ENST00000537842 COL9A3Q14050 684 aaPredicted RBP3.45□□□□□ -1.86
TNFRSF1A-210ENST00000537842 PDE3AQ14432 1141 aa3.45□□□□□ -1.86
TNFRSF1A-210ENST00000537842 SETDB1Q15047 1291 aa3.45□□□□□ -1.86
TNFRSF1A-210ENST00000537842 FOXD4L6Q3SYB3 417 aaPredicted RBP3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms