RNA–Protein interactions for RNA: ENST00000537162.5

CPSF7-217, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-217ENST00000537162 MFSD14CQ5VZR4 134 aa12.17□□□□□ -0.46
CPSF7-217ENST00000537162 HHIPL2Q6UWX4 724 aa12.17□□□□□ -0.46
CPSF7-217ENST00000537162 HFE2Q6ZVN8 426 aa12.17□□□□□ -0.46
CPSF7-217ENST00000537162 PLEKHH3Q7Z736 793 aa12.17□□□□□ -0.46
CPSF7-217ENST00000537162 ARRDC4Q8NCT1 418 aa12.17□□□□□ -0.46
CPSF7-217ENST00000537162 NPLOC4Q8TAT6 608 aa12.17□□□□□ -0.46
CPSF7-217ENST00000537162 TMEM39AQ9NV64 488 aa12.17□□□□□ -0.46
CPSF7-217ENST00000537162 PI4KAP2A4QPH2 592 aa12.16□□□□□ -0.46
CPSF7-217ENST00000537162 EPOPA6NHQ4 379 aa12.16□□□□□ -0.46
CPSF7-217ENST00000537162 GFRA3O60609 400 aa12.16□□□□□ -0.46
CPSF7-217ENST00000537162 CTNND1O60716 968 aaKnown RBP12.16□□□□□ -0.46
CPSF7-217ENST00000537162 IGHA2P01877 340 aa12.16□□□□□ -0.46
CPSF7-217ENST00000537162 MAP3K10Q02779 954 aa12.16□□□□□ -0.46
CPSF7-217ENST00000537162 LRRC41Q15345 812 aa12.16□□□□□ -0.46
CPSF7-217ENST00000537162 ZNF365Q70YC5 407 aa12.16□□□□□ -0.46
CPSF7-217ENST00000537162 GJD3Q8N144 294 aa12.16□□□□□ -0.46
CPSF7-217ENST00000537162 PI4KAP1Q8N8J0 262 aa12.16□□□□□ -0.46
CPSF7-217ENST00000537162 HLA-CQ95604 372 aa12.16□□□□□ -0.46
CPSF7-217ENST00000537162 EDC3Q96F86 508 aaKnown RBP12.16□□□□□ -0.46
CPSF7-217ENST00000537162 LRRFIP2Q9Y608 721 aaKnown RBP12.16□□□□□ -0.46
CPSF7-217ENST00000537162 TRIOO75962 3097 aa12.15□□□□□ -0.46
CPSF7-217ENST00000537162 CSF2RAP15509 400 aa12.15□□□□□ -0.46
CPSF7-217ENST00000537162 TMPOP42166 694 aaKnown RBP12.15□□□□□ -0.46
CPSF7-217ENST00000537162 ERVK-9P63128 1117 aa12.15□□□□□ -0.46
CPSF7-217ENST00000537162 ERVK-24P63145 666 aa12.15□□□□□ -0.46
CPSF7-217ENST00000537162 DIXDC1Q155Q3 683 aa12.15□□□□□ -0.46
CPSF7-217ENST00000537162 FBXO33Q7Z6M2 555 aa12.15□□□□□ -0.46
CPSF7-217ENST00000537162 SLC44A5Q8NCS7 719 aa12.15□□□□□ -0.46
CPSF7-217ENST00000537162 MYBBP1AQ9BQG0 1328 aaKnown RBP12.14□□□□□ -0.47
CPSF7-217ENST00000537162 DDTLA6NHG4 134 aaPredicted RBP12.14□□□□□ -0.47
CPSF7-217ENST00000537162 FAM196BA6NMK8 535 aa12.14□□□□□ -0.47
CPSF7-217ENST00000537162 ELL2O00472 640 aaPredicted RBP12.14□□□□□ -0.47
CPSF7-217ENST00000537162 RGS20O76081 388 aa12.14□□□□□ -0.47
CPSF7-217ENST00000537162 TIMP1P01033 207 aa12.14□□□□□ -0.47
CPSF7-217ENST00000537162 POU3F3P20264 500 aaPredicted RBP12.14□□□□□ -0.47
CPSF7-217ENST00000537162 HERVK_113P62684 666 aa12.14□□□□□ -0.47
CPSF7-217ENST00000537162 FOXO4P98177 505 aa12.14□□□□□ -0.47
CPSF7-217ENST00000537162 PABPC4Q13310 644 aaKnown RBP eCLIP12.14□□□□□ -0.47
CPSF7-217ENST00000537162 IER5LQ5T953 404 aa12.14□□□□□ -0.47
CPSF7-217ENST00000537162 FAM178BQ8IXR5 827 aa12.14□□□□□ -0.47
CPSF7-217ENST00000537162 TBC1D22AQ8WUA7 517 aa12.14□□□□□ -0.47
CPSF7-217ENST00000537162 CERS4Q9HA82 394 aa12.14□□□□□ -0.47
CPSF7-217ENST00000537162 ZFHX2Q9C0A1 2572 aaPredicted RBP12.13□□□□□ -0.47
CPSF7-217ENST00000537162 CACNA1BQ00975 2339 aa12.13□□□□□ -0.47
CPSF7-217ENST00000537162 ALADP13716 330 aa12.13□□□□□ -0.47
CPSF7-217ENST00000537162 RGS3P49796 1198 aa12.13□□□□□ -0.47
CPSF7-217ENST00000537162 IRX3P78415 501 aaPredicted RBP12.13□□□□□ -0.47
CPSF7-217ENST00000537162 ATP2B2Q01814 1243 aa12.13□□□□□ -0.47
CPSF7-217ENST00000537162 IFIT5Q13325 482 aaKnown RBP12.13□□□□□ -0.47
CPSF7-217ENST00000537162 UBE4AQ14139 1066 aa12.13□□□□□ -0.47
CPSF7-217ENST00000537162 GCKRQ14397 625 aa12.13□□□□□ -0.47
CPSF7-217ENST00000537162 RRP1BQ14684 758 aaKnown RBP12.13□□□□□ -0.47
CPSF7-217ENST00000537162 FAM47AQ5JRC9 791 aa12.13□□□□□ -0.47
CPSF7-217ENST00000537162 PPP2R2DQ66LE6 453 aa12.13□□□□□ -0.47
CPSF7-217ENST00000537162 MFSD5Q6N075 450 aa12.13□□□□□ -0.47
CPSF7-217ENST00000537162 KSR2Q6VAB6 950 aa12.13□□□□□ -0.47
CPSF7-217ENST00000537162 ZNF280CQ8ND82 737 aa12.13□□□□□ -0.47
CPSF7-217ENST00000537162 PAGR1Q9BTK6 254 aa12.13□□□□□ -0.47
CPSF7-217ENST00000537162 USP40Q9NVE5 1235 aa12.13□□□□□ -0.47
CPSF7-217ENST00000537162 FAM86C1Q9NVL1 165 aa12.13□□□□□ -0.47
CPSF7-217ENST00000537162 PHF24Q9UPV7 400 aa12.13□□□□□ -0.47
CPSF7-217ENST00000537162 BAHCC1Q9P281 2608 aa12.12□□□□□ -0.47
CPSF7-217ENST00000537162 CACNA1GO43497 2377 aa12.12□□□□□ -0.47
CPSF7-217ENST00000537162 POTEB3A0JP26 581 aa12.12□□□□□ -0.47
CPSF7-217ENST00000537162 DDX58O95786 925 aaKnown RBP12.12□□□□□ -0.47
CPSF7-217ENST00000537162 SSTR3P32745 418 aaPredicted RBP12.12□□□□□ -0.47
CPSF7-217ENST00000537162 NEUROD2Q15784 382 aa12.12□□□□□ -0.47
CPSF7-217ENST00000537162 SH3D19Q5HYK7 790 aa12.12□□□□□ -0.47
CPSF7-217ENST00000537162 PRAMEF19Q5SWL8 479 aa12.12□□□□□ -0.47
CPSF7-217ENST00000537162 POTEBQ6S5H4 581 aa12.12□□□□□ -0.47
CPSF7-217ENST00000537162 LDHAL6AQ6ZMR3 332 aa12.12□□□□□ -0.47
CPSF7-217ENST00000537162 PUS3Q9BZE2 481 aaKnown RBP12.12□□□□□ -0.47
CPSF7-217ENST00000537162 TBX21Q9UL17 535 aa12.12□□□□□ -0.47
CPSF7-217ENST00000537162 CHMP3Q9Y3E7 222 aa12.12□□□□□ -0.47
CPSF7-217ENST00000537162 MAST3O60307 1309 aa12.11□□□□□ -0.47
CPSF7-217ENST00000537162 PLXNA3P51805 1871 aa12.11□□□□□ -0.47
CPSF7-217ENST00000537162 COL4A4P53420 1690 aaPredicted RBP12.11□□□□□ -0.47
CPSF7-217ENST00000537162 FRAT2O75474 233 aaPredicted RBP12.11□□□□□ -0.47
CPSF7-217ENST00000537162 CNMDO75829 334 aa12.11□□□□□ -0.47
CPSF7-217ENST00000537162 TCF15Q12870 199 aa12.11□□□□□ -0.47
CPSF7-217ENST00000537162 PPIGQ13427 754 aaKnown RBP eCLIP12.11□□□□□ -0.477e-8■■■□□ 16.3
CPSF7-217ENST00000537162 ERMP1Q7Z2K6 904 aa12.11□□□□□ -0.47
CPSF7-217ENST00000537162 CCAR1Q8IX12 1150 aaKnown RBP12.11□□□□□ -0.47
CPSF7-217ENST00000537162 CNNM1Q9NRU3 951 aa12.11□□□□□ -0.47
CPSF7-217ENST00000537162 MBIPQ9NS73 344 aa12.11□□□□□ -0.47
CPSF7-217ENST00000537162 TRIM35Q9UPQ4 493 aa12.11□□□□□ -0.47
CPSF7-217ENST00000537162 RFX7Q2KHR2 1363 aa12.1□□□□□ -0.47
CPSF7-217ENST00000537162 MYH13Q9UKX3 1938 aa12.1□□□□□ -0.47
CPSF7-217ENST00000537162 A0A1W2PQ45 241 aaPredicted RBP12.1□□□□□ -0.47
CPSF7-217ENST00000537162 A0A1W2PQY0 241 aa12.1□□□□□ -0.47
CPSF7-217ENST00000537162 SEPT4O43236 478 aa12.1□□□□□ -0.47
CPSF7-217ENST00000537162 DCXO43602 365 aa12.1□□□□□ -0.47
CPSF7-217ENST00000537162 IL9P15248 144 aa12.1□□□□□ -0.47
CPSF7-217ENST00000537162 PTPREP23469 700 aa12.1□□□□□ -0.47
CPSF7-217ENST00000537162 HOXA7P31268 230 aaPredicted RBP12.1□□□□□ -0.47
CPSF7-217ENST00000537162 NEXNQ0ZGT2 675 aa12.1□□□□□ -0.47
CPSF7-217ENST00000537162 EPHA10Q5JZY3 1008 aa12.1□□□□□ -0.47
CPSF7-217ENST00000537162 ANKRD33Q7Z3H0 272 aa12.1□□□□□ -0.47
CPSF7-217ENST00000537162 ZSCAN29Q8IWY8 852 aaPredicted RBP12.1□□□□□ -0.47
CPSF7-217ENST00000537162 DDX4Q9NQI0 724 aaKnown RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms