RNA–Protein interactions for RNA: ENST00000537063.1

UBE3B-207, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 3 BASIC

Gene UBE3B, Length 3,600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-207ENST00000537063 KIAA1524Q8TCG1 905 aa10.75□□□□□ -0.69
UBE3B-207ENST00000537063 NAP1L5Q96NT1 182 aaPredicted RBP10.75□□□□□ -0.69
UBE3B-207ENST00000537063 BTBD18B2RXH4 712 aa10.75□□□□□ -0.69
UBE3B-207ENST00000537063 RILPL1Q5EBL4 403 aa10.75□□□□□ -0.69
UBE3B-207ENST00000537063 IFIT1BQ5T764 474 aaKnown RBP10.75□□□□□ -0.69
UBE3B-207ENST00000537063 IQCA1Q86XH1 822 aa10.75□□□□□ -0.69
UBE3B-207ENST00000537063 ZNF830Q96NB3 372 aaPredicted RBP10.75□□□□□ -0.69
UBE3B-207ENST00000537063 PHF20Q9BVI0 1012 aa10.75□□□□□ -0.69
UBE3B-207ENST00000537063 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.74□□□□□ -0.69
UBE3B-207ENST00000537063 KLRG2A4D1S0 409 aaPredicted RBP10.74□□□□□ -0.69
UBE3B-207ENST00000537063 MARCKSP29966 332 aaPredicted RBP10.74□□□□□ -0.69
UBE3B-207ENST00000537063 PPP4CP60510 307 aa10.74□□□□□ -0.69
UBE3B-207ENST00000537063 EVX2Q03828 476 aa10.74□□□□□ -0.69
UBE3B-207ENST00000537063 SAFBQ15424 915 aaKnown RBP eCLIP10.74□□□□□ -0.69
UBE3B-207ENST00000537063 SLC51AQ86UW1 340 aa10.74□□□□□ -0.69
UBE3B-207ENST00000537063 FBXO2Q9UK22 296 aaPredicted RBP10.74□□□□□ -0.69
UBE3B-207ENST00000537063 CNTNAP5Q8WYK1 1306 aa10.74□□□□□ -0.69
UBE3B-207ENST00000537063 TPM2P07951 284 aa10.74□□□□□ -0.69
UBE3B-207ENST00000537063 NLRP12P59046 1061 aa10.74□□□□□ -0.69
UBE3B-207ENST00000537063 GNL2Q13823 731 aaKnown RBP10.74□□□□□ -0.69
UBE3B-207ENST00000537063 TMTC3Q6ZXV5 915 aa10.74□□□□□ -0.69
UBE3B-207ENST00000537063 CATIPQ7Z7H3 387 aa10.74□□□□□ -0.69
UBE3B-207ENST00000537063 ZNF579Q8NAF0 562 aaKnown RBP10.74□□□□□ -0.69
UBE3B-207ENST00000537063 SDF4Q9BRK5 362 aa10.74□□□□□ -0.69
UBE3B-207ENST00000537063 NAT10Q9H0A0 1025 aaKnown RBP10.74□□□□□ -0.69
UBE3B-207ENST00000537063 PTPREP23469 700 aa10.73□□□□□ -0.69
UBE3B-207ENST00000537063 CHAF1AQ13111 956 aaPredicted RBP10.73□□□□□ -0.69
UBE3B-207ENST00000537063 ANKS1AQ92625 1134 aa10.73□□□□□ -0.69
UBE3B-207ENST00000537063 TNFRSF25Q93038 417 aa10.73□□□□□ -0.69
UBE3B-207ENST00000537063 PODXL2Q9NZ53 605 aa10.73□□□□□ -0.69
UBE3B-207ENST00000537063 KCNJ14Q9UNX9 436 aa10.73□□□□□ -0.69
UBE3B-207ENST00000537063 SLC3A2P08195 630 aaKnown RBP10.73□□□□□ -0.69
UBE3B-207ENST00000537063 IL1R1P14778 569 aa10.73□□□□□ -0.69
UBE3B-207ENST00000537063 HOXA10P31260 410 aaPredicted RBP10.73□□□□□ -0.69
UBE3B-207ENST00000537063 SYKP43405 635 aa10.73□□□□□ -0.69
UBE3B-207ENST00000537063 PLCB2Q00722 1185 aa10.73□□□□□ -0.69
UBE3B-207ENST00000537063 NOLC1Q14978 699 aaKnown RBP eCLIP10.73□□□□□ -0.69
UBE3B-207ENST00000537063 DPCR1Q3MIW9 517 aa10.73□□□□□ -0.69
UBE3B-207ENST00000537063 MEX3CQ5U5Q3 659 aaKnown RBP10.73□□□□□ -0.69
UBE3B-207ENST00000537063 ZNF804AQ7Z570 1209 aa10.73□□□□□ -0.69
UBE3B-207ENST00000537063 KRI1Q8N9T8 703 aaKnown RBP10.73□□□□□ -0.69
UBE3B-207ENST00000537063 NUP133Q8WUM0 1156 aa10.73□□□□□ -0.69
UBE3B-207ENST00000537063 TRIM5Q9C035 493 aa10.73□□□□□ -0.69
UBE3B-207ENST00000537063 NPY5RQ15761 445 aa10.73□□□□□ -0.69
UBE3B-207ENST00000537063 C12orf60Q5U649 245 aa10.73□□□□□ -0.69
UBE3B-207ENST00000537063 RCSD1Q6JBY9 416 aa10.73□□□□□ -0.69
UBE3B-207ENST00000537063 CMTR1Q8N1G2 835 aaKnown RBP10.73□□□□□ -0.69
UBE3B-207ENST00000537063 GOLGA6L19H0YKK7 550 aa10.72□□□□□ -0.69
UBE3B-207ENST00000537063 PLEKHA8P1O95397 391 aa10.72□□□□□ -0.69
UBE3B-207ENST00000537063 CYP2D6P10635 497 aa10.72□□□□□ -0.69
UBE3B-207ENST00000537063 GSTO1P78417 241 aa10.72□□□□□ -0.69
UBE3B-207ENST00000537063 GPSM2P81274 684 aa10.72□□□□□ -0.69
UBE3B-207ENST00000537063 DZIP1Q86YF9 867 aaKnown RBP10.72□□□□□ -0.69
UBE3B-207ENST00000537063 OXER1Q8TDS5 423 aa10.72□□□□□ -0.69
UBE3B-207ENST00000537063 ANKIB1Q9P2G1 1089 aa10.72□□□□□ -0.69
UBE3B-207ENST00000537063 PYCARDQ9ULZ3 195 aa10.72□□□□□ -0.69
UBE3B-207ENST00000537063 PRDM1O75626 825 aa10.72□□□□□ -0.69
UBE3B-207ENST00000537063 LDHBP07195 334 aaKnown RBP10.72□□□□□ -0.69
UBE3B-207ENST00000537063 PTGS1P23219 599 aa10.72□□□□□ -0.69
UBE3B-207ENST00000537063 HSPA1LP34931 641 aa10.72□□□□□ -0.69
UBE3B-207ENST00000537063 CERS3Q8IU89 383 aa10.72□□□□□ -0.69
UBE3B-207ENST00000537063 MPNDQ8N594 471 aa10.72□□□□□ -0.69
UBE3B-207ENST00000537063 SPC24Q8NBT2 197 aa10.72□□□□□ -0.69
UBE3B-207ENST00000537063 ERCC4Q92889 916 aaPredicted RBP10.72□□□□□ -0.69
UBE3B-207ENST00000537063 CLIC6Q96NY7 704 aa10.72□□□□□ -0.69
UBE3B-207ENST00000537063 COL11A2P13942 1736 aaPredicted RBP10.72□□□□□ -0.69
UBE3B-207ENST00000537063 A0A087WWV3 80 aa10.72□□□□□ -0.69
UBE3B-207ENST00000537063 MDM2Q00987 491 aaPredicted RBP10.72□□□□□ -0.69
UBE3B-207ENST00000537063 PDE4BQ07343 736 aa10.72□□□□□ -0.69
UBE3B-207ENST00000537063 NR5A1Q13285 461 aa10.72□□□□□ -0.69
UBE3B-207ENST00000537063 AOPEPQ8N6M6 819 aa10.72□□□□□ -0.69
UBE3B-207ENST00000537063 MYH1P12882 1939 aa10.71□□□□□ -0.69
UBE3B-207ENST00000537063 IKBKBO14920 756 aa10.71□□□□□ -0.69
UBE3B-207ENST00000537063 ATP2B4P23634 1241 aa10.71□□□□□ -0.69
UBE3B-207ENST00000537063 ST5P78524 1137 aa10.71□□□□□ -0.69
UBE3B-207ENST00000537063 NCAPHQ15003 741 aa10.71□□□□□ -0.69
UBE3B-207ENST00000537063 KRBA2Q6ZNG9 492 aa10.71□□□□□ -0.69
UBE3B-207ENST00000537063 METTL16Q86W50 562 aaKnown RBP10.71□□□□□ -0.69
UBE3B-207ENST00000537063 RTFDC1Q9BY42 306 aaPredicted RBP10.71□□□□□ -0.69
UBE3B-207ENST00000537063 TCP11L1Q9NUJ3 509 aa10.71□□□□□ -0.69
UBE3B-207ENST00000537063 SRPRBQ9Y5M8 271 aaKnown RBP10.71□□□□□ -0.69
UBE3B-207ENST00000537063 GRIK5Q16478 980 aa10.71□□□□□ -0.69
UBE3B-207ENST00000537063 RBM17Q96I25 401 aaKnown RBP10.71□□□□□ -0.69
UBE3B-207ENST00000537063 NOL10Q9BSC4 688 aaKnown RBP10.71□□□□□ -0.69
UBE3B-207ENST00000537063 KCNH3Q9ULD8 1083 aa10.71□□□□□ -0.69
UBE3B-207ENST00000537063 CEP131Q9UPN4 1083 aa10.71□□□□□ -0.69
UBE3B-207ENST00000537063 PCDHB6Q9Y5E3 794 aa10.71□□□□□ -0.69
UBE3B-207ENST00000537063 SNED1Q8TER0 1413 aa10.71□□□□□ -0.7
UBE3B-207ENST00000537063 POLRMTO00411 1230 aaKnown RBP10.71□□□□□ -0.7
UBE3B-207ENST00000537063 SERPINB2P05120 415 aa10.71□□□□□ -0.7
UBE3B-207ENST00000537063 XBP1P17861 261 aa10.71□□□□□ -0.7
UBE3B-207ENST00000537063 DDR1Q08345 913 aa10.71□□□□□ -0.7
UBE3B-207ENST00000537063 NT5DC1Q5TFE4 455 aa10.71□□□□□ -0.7
UBE3B-207ENST00000537063 SH3RF3Q8TEJ3 882 aaPredicted RBP10.71□□□□□ -0.7
UBE3B-207ENST00000537063 RPGRQ92834 1020 aaKnown RBP10.71□□□□□ -0.7
UBE3B-207ENST00000537063 CRAMP1Q96RY5 1269 aa10.71□□□□□ -0.7
UBE3B-207ENST00000537063 CLIP2Q9UDT6 1046 aa10.71□□□□□ -0.7
UBE3B-207ENST00000537063 ZNF646O15015 1829 aaPredicted RBP10.71□□□□□ -0.7
UBE3B-207ENST00000537063 RGPD3A6NKT7 1758 aaPredicted RBP10.7□□□□□ -0.7
UBE3B-207ENST00000537063 RGPD4Q7Z3J3 1758 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms