RNA–Protein interactions for RNA: ENST00000536625.1

KNTC1-209, Transcript of kinetochore associated 1, humanhuman

TSL 2

Gene KNTC1, Length 1,178 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-209ENST00000536625 PCOLCE2Q9UKZ9 415 aa6.98□□□□□ -1.29
KNTC1-209ENST00000536625 USP31Q70CQ4 1352 aa6.97□□□□□ -1.29
KNTC1-209ENST00000536625 SLFN14P0C7P3 912 aa6.97□□□□□ -1.29
KNTC1-209ENST00000536625 BCL2L13Q9BXK5 485 aa6.97□□□□□ -1.29
KNTC1-209ENST00000536625 GLI1P08151 1106 aa6.96□□□□□ -1.3
KNTC1-209ENST00000536625 RANGAP1P46060 587 aaPredicted RBP6.96□□□□□ -1.3
KNTC1-209ENST00000536625 XPCQ01831 940 aaPredicted RBP6.96□□□□□ -1.3
KNTC1-209ENST00000536625 PTPN11Q06124 597 aaPredicted RBP6.96□□□□□ -1.3
KNTC1-209ENST00000536625 PCNX4Q63HM2 1172 aa6.96□□□□□ -1.3
KNTC1-209ENST00000536625 MAP1SQ66K74 1059 aaPredicted RBP6.96□□□□□ -1.3
KNTC1-209ENST00000536625 GPBAR1Q8TDU6 330 aa6.96□□□□□ -1.3
KNTC1-209ENST00000536625 GIPC2Q8TF65 315 aa6.96□□□□□ -1.3
KNTC1-209ENST00000536625 ASB11Q8WXH4 323 aa6.96□□□□□ -1.3
KNTC1-209ENST00000536625 KCNB2Q92953 911 aa6.96□□□□□ -1.3
KNTC1-209ENST00000536625 EMILIN2Q9BXX0 1053 aa6.96□□□□□ -1.3
KNTC1-209ENST00000536625 KCNK12Q9HB15 430 aa6.96□□□□□ -1.3
KNTC1-209ENST00000536625 TTF2Q9UNY4 1162 aaKnown RBP6.96□□□□□ -1.3
KNTC1-209ENST00000536625 SORBS3O60504 671 aa6.95□□□□□ -1.3
KNTC1-209ENST00000536625 ZNF16P17020 682 aaPredicted RBP6.95□□□□□ -1.3
KNTC1-209ENST00000536625 AFMP43652 599 aa6.95□□□□□ -1.3
KNTC1-209ENST00000536625 MRPL58Q14197 206 aaKnown RBP6.95□□□□□ -1.3
KNTC1-209ENST00000536625 NKPD1Q17RQ9 610 aa6.95□□□□□ -1.3
KNTC1-209ENST00000536625 ZC3H12AQ5D1E8 599 aaKnown RBP6.95□□□□□ -1.3
KNTC1-209ENST00000536625 LDLRAD1Q5T700 205 aa6.95□□□□□ -1.3
KNTC1-209ENST00000536625 MPZL3Q6UWV2 235 aa6.95□□□□□ -1.3
KNTC1-209ENST00000536625 C19orf73Q9NVV2 129 aa6.95□□□□□ -1.3
KNTC1-209ENST00000536625 RAPGEFL1Q9UHV5 662 aa6.95□□□□□ -1.3
KNTC1-209ENST00000536625 TRIM37O94972 964 aa6.94□□□□□ -1.3
KNTC1-209ENST00000536625 ST13P50502 369 aaKnown RBP6.94□□□□□ -1.3
KNTC1-209ENST00000536625 RING1Q06587 406 aa6.94□□□□□ -1.3
KNTC1-209ENST00000536625 TAF1CQ15572 869 aaPredicted RBP6.94□□□□□ -1.3
KNTC1-209ENST00000536625 KIRREL1Q96J84 757 aa6.94□□□□□ -1.3
KNTC1-209ENST00000536625 CYP8B1Q9UNU6 501 aa6.94□□□□□ -1.3
KNTC1-209ENST00000536625 NPIPB6E9PJ23 425 aa6.93□□□□□ -1.3
KNTC1-209ENST00000536625 INHBBP09529 407 aa6.93□□□□□ -1.3
KNTC1-209ENST00000536625 CCDC85BQ15834 202 aaPredicted RBP6.93□□□□□ -1.3
KNTC1-209ENST00000536625 SCARA3Q6AZY7 606 aa6.93□□□□□ -1.3
KNTC1-209ENST00000536625 TTBK2Q6IQ55 1244 aa6.93□□□□□ -1.3
KNTC1-209ENST00000536625 LLGL2Q6P1M3 1020 aa6.93□□□□□ -1.3
KNTC1-209ENST00000536625 AMIGO3Q86WK7 504 aa6.93□□□□□ -1.3
KNTC1-209ENST00000536625 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.93□□□□□ -1.3
KNTC1-209ENST00000536625 CRELD1Q96HD1 420 aa6.93□□□□□ -1.3
KNTC1-209ENST00000536625 CBX8Q9HC52 389 aa6.93□□□□□ -1.3
KNTC1-209ENST00000536625 PITPNM2Q9BZ72 1349 aa6.93□□□□□ -1.3
KNTC1-209ENST00000536625 NTF4P34130 210 aa6.92□□□□□ -1.3
KNTC1-209ENST00000536625 RPS26P62854 115 aaKnown RBP6.92□□□□□ -1.3
KNTC1-209ENST00000536625 AGMOQ6ZNB7 445 aa6.92□□□□□ -1.3
KNTC1-209ENST00000536625 UBE3DQ7Z6J8 389 aa6.92□□□□□ -1.3
KNTC1-209ENST00000536625 GAL3ST3Q96A11 431 aa6.92□□□□□ -1.3
KNTC1-209ENST00000536625 DIRC2Q96SL1 478 aa6.92□□□□□ -1.3
KNTC1-209ENST00000536625 NOC4LQ9BVI4 516 aaKnown RBP6.92□□□□□ -1.3
KNTC1-209ENST00000536625 PODXL2Q9NZ53 605 aa6.92□□□□□ -1.3
KNTC1-209ENST00000536625 SAMM50Q9Y512 469 aa6.92□□□□□ -1.3
KNTC1-209ENST00000536625 RBM47A0AV96 593 aaKnown RBP6.91□□□□□ -1.3
KNTC1-209ENST00000536625 IGF2BP3O00425 579 aaKnown RBP eCLIP6.91□□□□□ -1.3
KNTC1-209ENST00000536625 NFIBO00712 420 aa6.91□□□□□ -1.3
KNTC1-209ENST00000536625 INPP5AQ14642 412 aa6.91□□□□□ -1.3
KNTC1-209ENST00000536625 LRRC14Q15048 493 aa6.91□□□□□ -1.3
KNTC1-209ENST00000536625 TMEM67Q5HYA8 995 aa6.91□□□□□ -1.3
KNTC1-209ENST00000536625 CYFIP1Q7L576 1253 aa6.91□□□□□ -1.3
KNTC1-209ENST00000536625 CARS2Q9HA77 564 aaKnown RBP6.91□□□□□ -1.3
KNTC1-209ENST00000536625 SSU72Q9NP77 194 aaKnown RBP6.91□□□□□ -1.3
KNTC1-209ENST00000536625 CD320Q9NPF0 282 aa6.91□□□□□ -1.3
KNTC1-209ENST00000536625 PCDHB5Q9Y5E4 795 aa6.91□□□□□ -1.3
KNTC1-209ENST00000536625 CDK8P49336 464 aa6.9□□□□□ -1.3
KNTC1-209ENST00000536625 LIG3P49916 1009 aa6.9□□□□□ -1.3
KNTC1-209ENST00000536625 ERVK-24P63145 666 aa6.9□□□□□ -1.3
KNTC1-209ENST00000536625 ZNF326Q5BKZ1 582 aaKnown RBP6.9□□□□□ -1.3
KNTC1-209ENST00000536625 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.9□□□□□ -1.3
KNTC1-209ENST00000536625 FBXO15Q8NCQ5 510 aaPredicted RBP6.9□□□□□ -1.3
KNTC1-209ENST00000536625 RNF214Q8ND24 703 aa6.9□□□□□ -1.3
KNTC1-209ENST00000536625 RGS22Q8NE09 1264 aa6.9□□□□□ -1.3
KNTC1-209ENST00000536625 NSUN3Q9H649 340 aaKnown RBP6.9□□□□□ -1.3
KNTC1-209ENST00000536625 VTI1BQ9UEU0 232 aa6.9□□□□□ -1.3
KNTC1-209ENST00000536625 GTF2IRD1Q9UHL9 959 aa6.9□□□□□ -1.3
KNTC1-209ENST00000536625 JAG2Q9Y219 1238 aa6.9□□□□□ -1.3
KNTC1-209ENST00000536625 TFE3P19532 575 aaPredicted RBP6.89□□□□□ -1.31
KNTC1-209ENST00000536625 MAP3K11Q16584 847 aa6.89□□□□□ -1.31
KNTC1-209ENST00000536625 C12orf40Q86WS4 652 aa6.89□□□□□ -1.31
KNTC1-209ENST00000536625 C20orf173Q96LM9 149 aa6.89□□□□□ -1.31
KNTC1-209ENST00000536625 PRDM10Q9NQV6 1147 aa6.89□□□□□ -1.31
KNTC1-209ENST00000536625 ZEB1P37275 1124 aaPredicted RBP6.88□□□□□ -1.31
KNTC1-209ENST00000536625 CTSWP56202 376 aa6.88□□□□□ -1.31
KNTC1-209ENST00000536625 KCNA10Q16322 511 aa6.88□□□□□ -1.31
KNTC1-209ENST00000536625 KRTAP5-3Q6L8H2 238 aa6.88□□□□□ -1.31
KNTC1-209ENST00000536625 PHC3Q8NDX5 983 aa6.88□□□□□ -1.31
KNTC1-209ENST00000536625 ATP13A1Q9HD20 1204 aa6.88□□□□□ -1.31
KNTC1-209ENST00000536625 MRS2Q9HD23 443 aa6.88□□□□□ -1.31
KNTC1-209ENST00000536625 PCDHA4Q9UN74 947 aa6.88□□□□□ -1.31
KNTC1-209ENST00000536625 TLR6Q9Y2C9 796 aa6.88□□□□□ -1.31
KNTC1-209ENST00000536625 CSADQ9Y600 493 aa6.88□□□□□ -1.31
KNTC1-209ENST00000536625 DCDC2CA8MYV0 355 aa6.87□□□□□ -1.31
KNTC1-209ENST00000536625 GFRA2O00451 464 aa6.87□□□□□ -1.31
KNTC1-209ENST00000536625 EOMESO95936 686 aa6.87□□□□□ -1.31
KNTC1-209ENST00000536625 CLCN7P51798 805 aa6.87□□□□□ -1.31
KNTC1-209ENST00000536625 SEPT6Q14141 434 aa6.87□□□□□ -1.31
KNTC1-209ENST00000536625 PPM1JQ5JR12 505 aa6.87□□□□□ -1.31
KNTC1-209ENST00000536625 LRFN4Q6PJG9 635 aa6.87□□□□□ -1.31
KNTC1-209ENST00000536625 ATG14Q6ZNE5 492 aa6.87□□□□□ -1.31
KNTC1-209ENST00000536625 ERMP1Q7Z2K6 904 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms