RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 HTTP42858 3142 aa17.21■□□□□ 0.35
UBE3B-206ENST00000536398 CYP2D7A0A087X1C5 515 aa17.21■□□□□ 0.35
UBE3B-206ENST00000536398 GH2P01242 217 aa17.21■□□□□ 0.35
UBE3B-206ENST00000536398 ASNSP08243 561 aa17.21■□□□□ 0.35
UBE3B-206ENST00000536398 MX1P20591 662 aa17.21■□□□□ 0.35
UBE3B-206ENST00000536398 CTGFP29279 349 aa17.21■□□□□ 0.35
UBE3B-206ENST00000536398 SHMT1P34896 483 aa17.21■□□□□ 0.35
UBE3B-206ENST00000536398 IRX6P78412 446 aaPredicted RBP17.21■□□□□ 0.35
UBE3B-206ENST00000536398 ZSCAN25Q6NSZ9 544 aa17.21■□□□□ 0.35
UBE3B-206ENST00000536398 OSBP2Q969R2 916 aa17.21■□□□□ 0.35
UBE3B-206ENST00000536398 RNF113AO15541 343 aaKnown RBP17.2■□□□□ 0.34
UBE3B-206ENST00000536398 LACTBP83111 547 aaPredicted RBP17.2■□□□□ 0.34
UBE3B-206ENST00000536398 GABPAQ06546 454 aa17.2■□□□□ 0.34
UBE3B-206ENST00000536398 B4GALNT3Q6L9W6 998 aa17.2■□□□□ 0.34
UBE3B-206ENST00000536398 SLC44A5Q8NCS7 719 aa17.2■□□□□ 0.34
UBE3B-206ENST00000536398 DYNLL2Q96FJ2 89 aa17.2■□□□□ 0.34
UBE3B-206ENST00000536398 WDR18Q9BV38 432 aa17.2■□□□□ 0.34
UBE3B-206ENST00000536398 AGTPBP1Q9UPW5 1226 aa17.2■□□□□ 0.34
UBE3B-206ENST00000536398 PTPN22Q9Y2R2 807 aa17.2■□□□□ 0.34
UBE3B-206ENST00000536398 SLC4A4Q9Y6R1 1079 aa17.2■□□□□ 0.34
UBE3B-206ENST00000536398 ATAD5Q96QE3 1844 aa17.19■□□□□ 0.34
UBE3B-206ENST00000536398 ERC2O15083 957 aa17.19■□□□□ 0.34
UBE3B-206ENST00000536398 GLRX3O76003 335 aaKnown RBP17.19■□□□□ 0.34
UBE3B-206ENST00000536398 BCRP11274 1271 aa17.19■□□□□ 0.34
UBE3B-206ENST00000536398 MTMR2Q13614 643 aa17.19■□□□□ 0.34
UBE3B-206ENST00000536398 AAMPQ13685 434 aa17.19■□□□□ 0.34
UBE3B-206ENST00000536398 CERKLQ49MI3 558 aaPredicted RBP17.19■□□□□ 0.34
UBE3B-206ENST00000536398 STRBPQ96SI9 672 aaKnown RBP17.19■□□□□ 0.34
UBE3B-206ENST00000536398 PARK7Q99497 189 aaKnown RBP17.19■□□□□ 0.34
UBE3B-206ENST00000536398 LNPKQ9C0E8 428 aa17.19■□□□□ 0.34
UBE3B-206ENST00000536398 AS3MTQ9HBK9 375 aa17.19■□□□□ 0.34
UBE3B-206ENST00000536398 ATP8A2Q9NTI2 1148 aa17.19■□□□□ 0.34
UBE3B-206ENST00000536398 CENPFP49454 3210 aa17.19■□□□□ 0.34
UBE3B-206ENST00000536398 PTPRFP10586 1907 aa17.18■□□□□ 0.34
UBE3B-206ENST00000536398 USP17L12C9JPN9 530 aa17.18■□□□□ 0.34
UBE3B-206ENST00000536398 USP17L21D6R901 530 aa17.18■□□□□ 0.34
UBE3B-206ENST00000536398 M0R2C6 588 aa17.18■□□□□ 0.34
UBE3B-206ENST00000536398 GUCY1A2P33402 732 aa17.18■□□□□ 0.34
UBE3B-206ENST00000536398 SOX10P56693 466 aa17.18■□□□□ 0.34
UBE3B-206ENST00000536398 BACE1P56817 501 aa17.18■□□□□ 0.34
UBE3B-206ENST00000536398 ABCB5Q2M3G0 1257 aa17.18■□□□□ 0.34
UBE3B-206ENST00000536398 SH3D19Q5HYK7 790 aa17.18■□□□□ 0.34
UBE3B-206ENST00000536398 PROCA1Q8NCQ7 364 aaPredicted RBP17.18■□□□□ 0.34
UBE3B-206ENST00000536398 SEC62Q99442 399 aaKnown RBP17.18■□□□□ 0.34
UBE3B-206ENST00000536398 TBC1D2Q9BYX2 928 aa17.18■□□□□ 0.34
UBE3B-206ENST00000536398 RWDD1Q9H446 243 aaPredicted RBP17.18■□□□□ 0.34
UBE3B-206ENST00000536398 ZBTB47Q9UFB7 747 aaPredicted RBP17.18■□□□□ 0.34
UBE3B-206ENST00000536398 SLC45A1Q9Y2W3 748 aa17.18■□□□□ 0.34
UBE3B-206ENST00000536398 ZSWIM8A7E2V4 1837 aa17.18■□□□□ 0.34
UBE3B-206ENST00000536398 DDX60LQ5H9U9 1706 aaKnown RBP17.18■□□□□ 0.34
UBE3B-206ENST00000536398 RAB3GAP1Q15042 981 aa17.17■□□□□ 0.34
UBE3B-206ENST00000536398 C12orf60Q5U649 245 aa17.17■□□□□ 0.34
UBE3B-206ENST00000536398 SMC5Q8IY18 1101 aa17.17■□□□□ 0.34
UBE3B-206ENST00000536398 NAV1Q8NEY1 1877 aa17.17■□□□□ 0.34
UBE3B-206ENST00000536398 ACER1Q8TDN7 264 aa17.17■□□□□ 0.34
UBE3B-206ENST00000536398 APPBP2Q92624 585 aa17.17■□□□□ 0.34
UBE3B-206ENST00000536398 GINM1Q9NU53 330 aa17.17■□□□□ 0.34
UBE3B-206ENST00000536398 STAP2Q9UGK3 403 aa17.17■□□□□ 0.34
UBE3B-206ENST00000536398 GSG1L2A8MUP6 293 aa17.16■□□□□ 0.34
UBE3B-206ENST00000536398 USP17L10C9JJH3 530 aa17.16■□□□□ 0.34
UBE3B-206ENST00000536398 PSMC4P43686 418 aa17.16■□□□□ 0.34
UBE3B-206ENST00000536398 PDE1AP54750 535 aa17.16■□□□□ 0.34
UBE3B-206ENST00000536398 CTR9Q6PD62 1173 aa17.16■□□□□ 0.34
UBE3B-206ENST00000536398 TRIM47Q96LD4 638 aa17.16■□□□□ 0.34
UBE3B-206ENST00000536398 FSD1Q9BTV5 496 aa17.16■□□□□ 0.34
UBE3B-206ENST00000536398 EMILIN3Q9NT22 766 aa17.16■□□□□ 0.34
UBE3B-206ENST00000536398 PTCH2Q9Y6C5 1203 aa17.16■□□□□ 0.34
UBE3B-206ENST00000536398 MYH7P12883 1935 aa17.15■□□□□ 0.34
UBE3B-206ENST00000536398 GPAA1O43292 621 aa17.15■□□□□ 0.34
UBE3B-206ENST00000536398 ZFYP08048 801 aaPredicted RBP17.15■□□□□ 0.34
UBE3B-206ENST00000536398 KIF22Q14807 665 aa17.15■□□□□ 0.34
UBE3B-206ENST00000536398 SEPT2Q15019 361 aa17.15■□□□□ 0.34
UBE3B-206ENST00000536398 ZYXQ15942 572 aaKnown RBP17.15■□□□□ 0.34
UBE3B-206ENST00000536398 ANKRD13CQ8N6S4 541 aa17.15■□□□□ 0.34
UBE3B-206ENST00000536398 TMOD4Q9NZQ9 345 aa17.15■□□□□ 0.34
UBE3B-206ENST00000536398 C19orf81C9J6K1 198 aa17.14■□□□□ 0.33
UBE3B-206ENST00000536398 MPHOSPH10O00566 681 aaKnown RBP17.14■□□□□ 0.33
UBE3B-206ENST00000536398 PEX10O60683 326 aa17.14■□□□□ 0.33
UBE3B-206ENST00000536398 CDK8P49336 464 aa17.14■□□□□ 0.33
UBE3B-206ENST00000536398 STK11IPQ8N1F8 1099 aa17.14■□□□□ 0.33
UBE3B-206ENST00000536398 SMCR8Q8TEV9 937 aaPredicted RBP17.14■□□□□ 0.33
UBE3B-206ENST00000536398 ASCC2Q9H1I8 757 aaPredicted RBP17.14■□□□□ 0.33
UBE3B-206ENST00000536398 CABP5Q9NP86 173 aa17.14■□□□□ 0.33
UBE3B-206ENST00000536398 BAZ2AQ9UIF9 1905 aaKnown RBP17.13■□□□□ 0.33
UBE3B-206ENST00000536398 FMNL1O95466 1100 aaPredicted RBP17.13■□□□□ 0.33
UBE3B-206ENST00000536398 AKR1B1P15121 316 aa17.13■□□□□ 0.33
UBE3B-206ENST00000536398 OSBPP22059 807 aa17.13■□□□□ 0.33
UBE3B-206ENST00000536398 RGS19P49795 217 aa17.13■□□□□ 0.33
UBE3B-206ENST00000536398 NUCB1Q02818 461 aa17.13■□□□□ 0.33
UBE3B-206ENST00000536398 ARHGEF6Q15052 776 aa17.13■□□□□ 0.33
UBE3B-206ENST00000536398 CHD1LQ86WJ1 897 aa17.13■□□□□ 0.33
UBE3B-206ENST00000536398 CLEC10AQ8IUN9 316 aa17.13■□□□□ 0.33
UBE3B-206ENST00000536398 P2RX7Q99572 595 aaKnown RBP17.13■□□□□ 0.33
UBE3B-206ENST00000536398 EPB41L4AQ9HCS5 686 aaPredicted RBP17.13■□□□□ 0.33
UBE3B-206ENST00000536398 LOC285556D6RIA3 1793 aa17.12■□□□□ 0.33
UBE3B-206ENST00000536398 A0A1W2PRG0 241 aa17.12■□□□□ 0.33
UBE3B-206ENST00000536398 HOXA7P31268 230 aaPredicted RBP17.12■□□□□ 0.33
UBE3B-206ENST00000536398 ZMYM1Q5SVZ6 1142 aa17.12■□□□□ 0.33
UBE3B-206ENST00000536398 USP17L2Q6R6M4 530 aa17.12■□□□□ 0.33
UBE3B-206ENST00000536398 POTEEQ6S8J3 1075 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms