RNA–Protein interactions for RNA: ENST00000536295.1

RTN3P1-201, Transcript of reticulon 3 pseudogene 1, humanhuman

BASIC

Gene RTN3P1, Length 711 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3P1-201ENST00000536295 MYH1P12882 1939 aa17.31■□□□□ 0.36
RTN3P1-201ENST00000536295 ATP5JP18859 108 aa17.31■□□□□ 0.36
RTN3P1-201ENST00000536295 PRKCZQ05513 592 aa17.31■□□□□ 0.36
RTN3P1-201ENST00000536295 PABPC4Q13310 644 aaKnown RBP eCLIP17.31■□□□□ 0.36
RTN3P1-201ENST00000536295 SLFNL1Q499Z3 407 aa17.31■□□□□ 0.36
RTN3P1-201ENST00000536295 SH3D19Q5HYK7 790 aa17.31■□□□□ 0.36
RTN3P1-201ENST00000536295 TTC6Q86TZ1 520 aa17.31■□□□□ 0.36
RTN3P1-201ENST00000536295 WDR18Q9BV38 432 aa17.31■□□□□ 0.36
RTN3P1-201ENST00000536295 CRNKL1Q9BZJ0 848 aaKnown RBP17.31■□□□□ 0.36
RTN3P1-201ENST00000536295 TMOD4Q9NZQ9 345 aa17.31■□□□□ 0.36
RTN3P1-201ENST00000536295 SERPINB13Q9UIV8 391 aa17.31■□□□□ 0.36
RTN3P1-201ENST00000536295 LOC285556D6RIA3 1793 aa17.3■□□□□ 0.36
RTN3P1-201ENST00000536295 TCRBV5S4A2TA0A5A2 114 aa17.3■□□□□ 0.36
RTN3P1-201ENST00000536295 GH2P01242 217 aa17.3■□□□□ 0.36
RTN3P1-201ENST00000536295 POLR3DP05423 398 aaPredicted RBP17.3■□□□□ 0.36
RTN3P1-201ENST00000536295 BACE1P56817 501 aa17.3■□□□□ 0.36
RTN3P1-201ENST00000536295 LCORLQ8N3X6 602 aa17.3■□□□□ 0.36
RTN3P1-201ENST00000536295 ASCC2Q9H1I8 757 aaPredicted RBP17.3■□□□□ 0.36
RTN3P1-201ENST00000536295 GABRQQ9UN88 632 aa17.3■□□□□ 0.36
RTN3P1-201ENST00000536295 USP17L10C9JJH3 530 aa17.29■□□□□ 0.36
RTN3P1-201ENST00000536295 TNPO2O14787 897 aaKnown RBP17.29■□□□□ 0.36
RTN3P1-201ENST00000536295 GRK4P32298 578 aa17.29■□□□□ 0.36
RTN3P1-201ENST00000536295 PLCD1P51178 756 aa17.29■□□□□ 0.36
RTN3P1-201ENST00000536295 SDR42E1Q8WUS8 393 aa17.29■□□□□ 0.36
RTN3P1-201ENST00000536295 HAUS7Q99871 368 aa17.29■□□□□ 0.36
RTN3P1-201ENST00000536295 EHD4Q9H223 541 aa17.29■□□□□ 0.36
RTN3P1-201ENST00000536295 ARMT1Q9H993 441 aa17.29■□□□□ 0.36
RTN3P1-201ENST00000536295 GINM1Q9NU53 330 aa17.29■□□□□ 0.36
RTN3P1-201ENST00000536295 MCM9Q9NXL9 1143 aa17.29■□□□□ 0.36
RTN3P1-201ENST00000536295 BIN2Q9UBW5 565 aaPredicted RBP17.29■□□□□ 0.36
RTN3P1-201ENST00000536295 RBBP6Q7Z6E9 1792 aaKnown RBP17.28■□□□□ 0.36
RTN3P1-201ENST00000536295 ADD2P35612 726 aa17.28■□□□□ 0.36
RTN3P1-201ENST00000536295 IRX3P78415 501 aaPredicted RBP17.28■□□□□ 0.36
RTN3P1-201ENST00000536295 RAB3GAP1Q15042 981 aa17.28■□□□□ 0.36
RTN3P1-201ENST00000536295 MTFR1Q15390 333 aa17.28■□□□□ 0.36
RTN3P1-201ENST00000536295 FAM110CQ1W6H9 321 aa17.28■□□□□ 0.36
RTN3P1-201ENST00000536295 CERKLQ49MI3 558 aaPredicted RBP17.28■□□□□ 0.36
RTN3P1-201ENST00000536295 TATDN1Q6P1N9 297 aa17.28■□□□□ 0.36
RTN3P1-201ENST00000536295 YTHDC1Q96MU7 727 aaKnown RBP17.28■□□□□ 0.36
RTN3P1-201ENST00000536295 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.28■□□□□ 0.36
RTN3P1-201ENST00000536295 TAOK2Q9UL54 1235 aa17.28■□□□□ 0.36
RTN3P1-201ENST00000536295 MGAMO43451 1857 aa17.27■□□□□ 0.36
RTN3P1-201ENST00000536295 C19orf81C9J6K1 198 aa17.27■□□□□ 0.36
RTN3P1-201ENST00000536295 MBD4O95243 580 aa17.27■□□□□ 0.36
RTN3P1-201ENST00000536295 CHGBP05060 677 aa17.27■□□□□ 0.36
RTN3P1-201ENST00000536295 GCLCP48506 637 aaPredicted RBP17.27■□□□□ 0.36
RTN3P1-201ENST00000536295 FLT3LGP49771 235 aa17.27■□□□□ 0.36
RTN3P1-201ENST00000536295 EVX2Q03828 476 aa17.27■□□□□ 0.36
RTN3P1-201ENST00000536295 ZYXQ15942 572 aaKnown RBP17.27■□□□□ 0.36
RTN3P1-201ENST00000536295 ABCB5Q2M3G0 1257 aa17.27■□□□□ 0.36
RTN3P1-201ENST00000536295 FEZ1Q99689 392 aa17.27■□□□□ 0.36
RTN3P1-201ENST00000536295 DCTPP1Q9H773 170 aa17.27■□□□□ 0.36
RTN3P1-201ENST00000536295 NAV1Q8NEY1 1877 aa17.27■□□□□ 0.35
RTN3P1-201ENST00000536295 PRKAB2O43741 272 aa17.26■□□□□ 0.35
RTN3P1-201ENST00000536295 CYP2D6P10635 497 aa17.26■□□□□ 0.35
RTN3P1-201ENST00000536295 SHMT1P34896 483 aa17.26■□□□□ 0.35
RTN3P1-201ENST00000536295 COA7Q96BR5 231 aa17.26■□□□□ 0.35
RTN3P1-201ENST00000536295 CABP5Q9NP86 173 aa17.26■□□□□ 0.35
RTN3P1-201ENST00000536295 DCP1AQ9NPI6 582 aaPredicted RBP17.26■□□□□ 0.35
RTN3P1-201ENST00000536295 ECHDC1Q9NTX5 307 aa17.26■□□□□ 0.35
RTN3P1-201ENST00000536295 KIAA0100Q14667 2235 aaKnown RBP17.26■□□□□ 0.35
RTN3P1-201ENST00000536295 DDX60LQ5H9U9 1706 aaKnown RBP17.25■□□□□ 0.35
RTN3P1-201ENST00000536295 ADCY3O60266 1144 aa17.25■□□□□ 0.35
RTN3P1-201ENST00000536295 PEX10O60683 326 aa17.25■□□□□ 0.35
RTN3P1-201ENST00000536295 ELNP15502 786 aa17.25■□□□□ 0.35
RTN3P1-201ENST00000536295 RRP1P56182 461 aaKnown RBP17.25■□□□□ 0.35
RTN3P1-201ENST00000536295 PRPF38BQ5VTL8 546 aaKnown RBP17.25■□□□□ 0.35
RTN3P1-201ENST00000536295 TSHZ3Q63HK5 1081 aa17.25■□□□□ 0.35
RTN3P1-201ENST00000536295 USP17L2Q6R6M4 530 aa17.25■□□□□ 0.35
RTN3P1-201ENST00000536295 SLAIN1Q8ND83 568 aa17.25■□□□□ 0.35
RTN3P1-201ENST00000536295 P2RX7Q99572 595 aaKnown RBP17.25■□□□□ 0.35
RTN3P1-201ENST00000536295 EMILIN3Q9NT22 766 aa17.25■□□□□ 0.35
RTN3P1-201ENST00000536295 PDE4DIPQ5VU43 2346 aa17.25■□□□□ 0.35
RTN3P1-201ENST00000536295 MPHOSPH10O00566 681 aaKnown RBP17.24■□□□□ 0.35
RTN3P1-201ENST00000536295 HOXA7P31268 230 aaPredicted RBP17.24■□□□□ 0.35
RTN3P1-201ENST00000536295 HERVK_113P62684 666 aa17.24■□□□□ 0.35
RTN3P1-201ENST00000536295 UBXN2AP68543 259 aa17.24■□□□□ 0.35
RTN3P1-201ENST00000536295 GPATCH3Q96I76 525 aa17.24■□□□□ 0.35
RTN3P1-201ENST00000536295 PCDHB15Q9Y5E8 787 aa17.24■□□□□ 0.35
RTN3P1-201ENST00000536295 BRCA2P51587 3418 aa17.24■□□□□ 0.35
RTN3P1-201ENST00000536295 CCL5P13501 91 aa17.23■□□□□ 0.35
RTN3P1-201ENST00000536295 GABPAQ06546 454 aa17.23■□□□□ 0.35
RTN3P1-201ENST00000536295 UBE3CQ15386 1083 aa17.23■□□□□ 0.35
RTN3P1-201ENST00000536295 ZSCAN25Q6NSZ9 544 aa17.23■□□□□ 0.35
RTN3P1-201ENST00000536295 SLC44A5Q8NCS7 719 aa17.23■□□□□ 0.35
RTN3P1-201ENST00000536295 ACER1Q8TDN7 264 aa17.23■□□□□ 0.35
RTN3P1-201ENST00000536295 DYNLL2Q96FJ2 89 aa17.23■□□□□ 0.35
RTN3P1-201ENST00000536295 RNF208Q9H0X6 261 aa17.23■□□□□ 0.35
RTN3P1-201ENST00000536295 GUCY1A2P33402 732 aa17.22■□□□□ 0.35
RTN3P1-201ENST00000536295 SEPT2Q15019 361 aa17.22■□□□□ 0.35
RTN3P1-201ENST00000536295 PAGR1Q9BTK6 254 aa17.22■□□□□ 0.35
RTN3P1-201ENST00000536295 PUS7LQ9H0K6 701 aaKnown RBP17.22■□□□□ 0.35
RTN3P1-201ENST00000536295 TXNRD2Q9NNW7 524 aa17.22■□□□□ 0.35
RTN3P1-201ENST00000536295 ATP8A2Q9NTI2 1148 aa17.22■□□□□ 0.35
RTN3P1-201ENST00000536295 MORF4L1Q9UBU8 362 aa17.22■□□□□ 0.35
RTN3P1-201ENST00000536295 SLC4A4Q9Y6R1 1079 aa17.22■□□□□ 0.35
RTN3P1-201ENST00000536295 CYP2D7A0A087X1C5 515 aa17.21■□□□□ 0.35
RTN3P1-201ENST00000536295 INHAP05111 366 aa17.21■□□□□ 0.35
RTN3P1-201ENST00000536295 USP14P54578 494 aa17.21■□□□□ 0.35
RTN3P1-201ENST00000536295 IRF5Q13568 498 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms