RNA–Protein interactions for RNA: ENST00000536239.1

SKA3-207, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-207ENST00000536239 FGD1P98174 961 aa5.26□□□□□ -1.57
SKA3-207ENST00000536239 UBE2FQ969M7 185 aa5.26□□□□□ -1.57
SKA3-207ENST00000536239 RELTQ969Z4 430 aa5.26□□□□□ -1.57
SKA3-207ENST00000536239 DMRTB1Q96MA1 342 aa5.26□□□□□ -1.57
SKA3-207ENST00000536239 SLAMF8Q9P0V8 285 aa5.26□□□□□ -1.57
SKA3-207ENST00000536239 PCDHA4Q9UN74 947 aa5.26□□□□□ -1.57
SKA3-207ENST00000536239 SRFP11831 508 aa5.25□□□□□ -1.57
SKA3-207ENST00000536239 ERVFC1P60507 584 aa5.25□□□□□ -1.57
SKA3-207ENST00000536239 RALGPS1Q5JS13 557 aa5.25□□□□□ -1.57
SKA3-207ENST00000536239 NXPE4Q6UWF7 544 aa5.25□□□□□ -1.57
SKA3-207ENST00000536239 MYLIPQ8WY64 445 aa5.25□□□□□ -1.57
SKA3-207ENST00000536239 IRF2BPLQ9H1B7 796 aa5.25□□□□□ -1.57
SKA3-207ENST00000536239 PARD6AQ9NPB6 346 aa5.25□□□□□ -1.57
SKA3-207ENST00000536239 SAMM50Q9Y512 469 aa5.25□□□□□ -1.57
SKA3-207ENST00000536239 DNAJC25-GNG10A0A024R161 153 aa5.24□□□□□ -1.57
SKA3-207ENST00000536239 ENC1O14682 589 aa5.24□□□□□ -1.57
SKA3-207ENST00000536239 SLBPQ14493 270 aaKnown RBP eCLIP5.24□□□□□ -1.57
SKA3-207ENST00000536239 SCARA3Q6AZY7 606 aa5.24□□□□□ -1.57
SKA3-207ENST00000536239 MFSD2AQ8NA29 543 aa5.24□□□□□ -1.57
SKA3-207ENST00000536239 C3orf58Q8NDZ4 430 aa5.24□□□□□ -1.57
SKA3-207ENST00000536239 RIN3Q8TB24 985 aa5.24□□□□□ -1.57
SKA3-207ENST00000536239 ELMO3Q96BJ8 720 aa5.24□□□□□ -1.57
SKA3-207ENST00000536239 MIPEPQ99797 713 aa5.24□□□□□ -1.57
SKA3-207ENST00000536239 FBRSQ9HAH7 460 aa5.24□□□□□ -1.57
SKA3-207ENST00000536239 ZSWIM5Q9P217 1185 aa5.24□□□□□ -1.57
SKA3-207ENST00000536239 PAGE1O75459 146 aa5.23□□□□□ -1.57
SKA3-207ENST00000536239 CBX7O95931 251 aa5.23□□□□□ -1.57
SKA3-207ENST00000536239 HPXP02790 462 aa5.23□□□□□ -1.57
SKA3-207ENST00000536239 CAP2P40123 477 aa5.23□□□□□ -1.57
SKA3-207ENST00000536239 LRRC14Q15048 493 aa5.23□□□□□ -1.57
SKA3-207ENST00000536239 B4GALNT3Q6L9W6 998 aa5.23□□□□□ -1.57
SKA3-207ENST00000536239 LLGL2Q6P1M3 1020 aa5.23□□□□□ -1.57
SKA3-207ENST00000536239 TPTE2Q6XPS3 522 aa5.23□□□□□ -1.57
SKA3-207ENST00000536239 RBCK1Q9BYM8 510 aa5.23□□□□□ -1.57
SKA3-207ENST00000536239 TMEM59LQ9UK28 342 aa5.23□□□□□ -1.57
SKA3-207ENST00000536239 ESR1P03372 595 aa5.22□□□□□ -1.57
SKA3-207ENST00000536239 HK2P52789 917 aa5.22□□□□□ -1.57
SKA3-207ENST00000536239 INPP5AQ14642 412 aa5.22□□□□□ -1.57
SKA3-207ENST00000536239 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.22□□□□□ -1.57
SKA3-207ENST00000536239 RASIP1Q5U651 963 aa5.22□□□□□ -1.57
SKA3-207ENST00000536239 ZNF746Q6NUN9 644 aaPredicted RBP5.22□□□□□ -1.57
SKA3-207ENST00000536239 LETMD1Q6P1Q0 360 aa5.22□□□□□ -1.57
SKA3-207ENST00000536239 TMPRSS7Q7RTY8 843 aa5.22□□□□□ -1.57
SKA3-207ENST00000536239 CCDC82Q8N4S0 544 aa5.22□□□□□ -1.57
SKA3-207ENST00000536239 CEP44Q9C0F1 390 aa5.22□□□□□ -1.57
SKA3-207ENST00000536239 ADAMTS20P59510 1910 aa5.22□□□□□ -1.57
SKA3-207ENST00000536239 PRAMEF27A3QJZ7 478 aa5.21□□□□□ -1.58
SKA3-207ENST00000536239 RBAK-RBAKDNI3L0D1 243 aa5.21□□□□□ -1.58
SKA3-207ENST00000536239 FOXD2O60548 495 aaPredicted RBP5.21□□□□□ -1.58
SKA3-207ENST00000536239 BMP7P18075 431 aa5.21□□□□□ -1.58
SKA3-207ENST00000536239 KIR3DL1P43629 444 aa5.21□□□□□ -1.58
SKA3-207ENST00000536239 TNK2Q07912 1038 aa5.21□□□□□ -1.58
SKA3-207ENST00000536239 NKG7Q16617 165 aa5.21□□□□□ -1.58
SKA3-207ENST00000536239 LRFN4Q6PJG9 635 aa5.21□□□□□ -1.58
SKA3-207ENST00000536239 COX4I2Q96KJ9 171 aa5.21□□□□□ -1.58
SKA3-207ENST00000536239 WNT10AQ9GZT5 417 aa5.21□□□□□ -1.58
SKA3-207ENST00000536239 ADAMTS10Q9H324 1103 aa5.21□□□□□ -1.58
SKA3-207ENST00000536239 ZCCHC4Q9H5U6 513 aa5.21□□□□□ -1.58
SKA3-207ENST00000536239 CYP8B1Q9UNU6 501 aa5.21□□□□□ -1.58
SKA3-207ENST00000536239 A0A0G2JLL6 359 aaPredicted RBP5.2□□□□□ -1.58
SKA3-207ENST00000536239 CYP7A1P22680 504 aa5.2□□□□□ -1.58
SKA3-207ENST00000536239 GSTT1P30711 240 aa5.2□□□□□ -1.58
SKA3-207ENST00000536239 BAHD1Q8TBE0 780 aaPredicted RBP5.2□□□□□ -1.58
SKA3-207ENST00000536239 MCOLN1Q9GZU1 580 aa5.2□□□□□ -1.58
SKA3-207ENST00000536239 RNF32Q9H0A6 362 aa5.2□□□□□ -1.58
SKA3-207ENST00000536239 SP110Q9HB58 689 aa5.2□□□□□ -1.58
SKA3-207ENST00000536239 TRHRP34981 398 aaPredicted RBP5.19□□□□□ -1.58
SKA3-207ENST00000536239 DLG4P78352 724 aa5.19□□□□□ -1.58
SKA3-207ENST00000536239 HDXQ7Z353 690 aa5.19□□□□□ -1.58
SKA3-207ENST00000536239 HID1Q8IV36 788 aa5.19□□□□□ -1.58
SKA3-207ENST00000536239 PLPPR2Q96GM1 343 aa5.19□□□□□ -1.58
SKA3-207ENST00000536239 KCNC2Q96PR1 638 aa5.19□□□□□ -1.58
SKA3-207ENST00000536239 PPM1HQ9ULR3 514 aa5.19□□□□□ -1.58
SKA3-207ENST00000536239 USTQ9Y2C2 406 aa5.19□□□□□ -1.58
SKA3-207ENST00000536239 WASH4PA8MWX3 477 aa5.18□□□□□ -1.58
SKA3-207ENST00000536239 FBXO24O75426 580 aa5.18□□□□□ -1.58
SKA3-207ENST00000536239 CST3P01034 146 aaPredicted RBP5.18□□□□□ -1.58
SKA3-207ENST00000536239 ETF1P62495 437 aaKnown RBP5.18□□□□□ -1.58
SKA3-207ENST00000536239 PTPN11Q06124 597 aaPredicted RBP5.18□□□□□ -1.58
SKA3-207ENST00000536239 DBX2Q6ZNG2 339 aa5.18□□□□□ -1.58
SKA3-207ENST00000536239 IRF2BP1Q8IU81 584 aa5.18□□□□□ -1.58
SKA3-207ENST00000536239 CREG2Q8IUH2 290 aa5.18□□□□□ -1.58
SKA3-207ENST00000536239 PIWIL2Q8TC59 973 aaKnown RBP5.18□□□□□ -1.58
SKA3-207ENST00000536239 SNCAIPQ9Y6H5 919 aa5.18□□□□□ -1.58
SKA3-207ENST00000536239 PNMA6FA0A0J9YX94 578 aa5.17□□□□□ -1.58
SKA3-207ENST00000536239 MYOCOSA0A1B0GUC4 107 aa5.17□□□□□ -1.58
SKA3-207ENST00000536239 PEX10O60683 326 aa5.17□□□□□ -1.58
SKA3-207ENST00000536239 SEMA7AO75326 666 aa5.17□□□□□ -1.58
SKA3-207ENST00000536239 SYN1P17600 705 aa5.17□□□□□ -1.58
SKA3-207ENST00000536239 PRAMEF13Q5VWM6 474 aa5.17□□□□□ -1.58
SKA3-207ENST00000536239 PCNX4Q63HM2 1172 aa5.17□□□□□ -1.58
SKA3-207ENST00000536239 TMC7Q7Z402 723 aa5.17□□□□□ -1.58
SKA3-207ENST00000536239 CDH24Q86UP0 819 aa5.17□□□□□ -1.58
SKA3-207ENST00000536239 TXNDC2Q86VQ3 553 aa5.17□□□□□ -1.58
SKA3-207ENST00000536239 LILRA2Q8N149 483 aa5.17□□□□□ -1.58
SKA3-207ENST00000536239 MARCH10Q8NA82 808 aaPredicted RBP5.17□□□□□ -1.58
SKA3-207ENST00000536239 PDZD8Q8NEN9 1154 aa5.17□□□□□ -1.58
SKA3-207ENST00000536239 ANKRD24Q8TF21 1146 aa5.17□□□□□ -1.58
SKA3-207ENST00000536239 XAGE3Q8WTP9 111 aa5.17□□□□□ -1.58
SKA3-207ENST00000536239 SRCIN1Q9C0H9 1055 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms