RNA–Protein interactions for RNA: ENST00000536212.1

VPS33A-203, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-203ENST00000536212 USP17L15C9J2P7 530 aa6.71□□□□□ -1.34
VPS33A-203ENST00000536212 USP17L10C9JJH3 530 aa6.71□□□□□ -1.34
VPS33A-203ENST00000536212 USP17L13C9JLJ4 530 aa6.71□□□□□ -1.34
VPS33A-203ENST00000536212 USP17L12C9JPN9 530 aa6.71□□□□□ -1.34
VPS33A-203ENST00000536212 USP17L11C9JVI0 530 aa6.71□□□□□ -1.34
VPS33A-203ENST00000536212 USP17L21D6R901 530 aa6.71□□□□□ -1.34
VPS33A-203ENST00000536212 USP17L18D6R9N7 530 aa6.71□□□□□ -1.34
VPS33A-203ENST00000536212 USP17L22D6RA61 530 aa6.71□□□□□ -1.34
VPS33A-203ENST00000536212 USP17L17D6RBQ6 530 aa6.71□□□□□ -1.34
VPS33A-203ENST00000536212 USP17L19D6RCP7 530 aa6.71□□□□□ -1.34
VPS33A-203ENST00000536212 USP17L20D6RJB6 530 aa6.71□□□□□ -1.34
VPS33A-203ENST00000536212 CTIFO43310 598 aaKnown RBP6.71□□□□□ -1.34
VPS33A-203ENST00000536212 DTNBO60941 627 aa6.71□□□□□ -1.34
VPS33A-203ENST00000536212 CTDNEP1O95476 244 aa6.71□□□□□ -1.34
VPS33A-203ENST00000536212 CYP21A2P08686 494 aa6.71□□□□□ -1.34
VPS33A-203ENST00000536212 MYL6BP14649 208 aa6.71□□□□□ -1.34
VPS33A-203ENST00000536212 EVCP57679 992 aa6.71□□□□□ -1.34
VPS33A-203ENST00000536212 USP17L24Q0WX57 530 aa6.71□□□□□ -1.34
VPS33A-203ENST00000536212 SCRN1Q12765 414 aa6.71□□□□□ -1.34
VPS33A-203ENST00000536212 IQCB1Q15051 598 aa6.71□□□□□ -1.34
VPS33A-203ENST00000536212 ANO6Q4KMQ2 910 aa6.71□□□□□ -1.34
VPS33A-203ENST00000536212 C4orf48Q5BLP8 95 aa6.71□□□□□ -1.34
VPS33A-203ENST00000536212 DNTTIP2Q5QJE6 756 aaKnown RBP6.71□□□□□ -1.34
VPS33A-203ENST00000536212 KANK3Q6NY19 840 aa6.71□□□□□ -1.34
VPS33A-203ENST00000536212 Q6ZUG5 572 aa6.71□□□□□ -1.34
VPS33A-203ENST00000536212 ATG9AQ7Z3C6 839 aa6.71□□□□□ -1.34
VPS33A-203ENST00000536212 FERMT3Q86UX7 667 aa6.71□□□□□ -1.34
VPS33A-203ENST00000536212 LUZP1Q86V48 1076 aa6.71□□□□□ -1.34
VPS33A-203ENST00000536212 SMAP1Q8IYB5 467 aaPredicted RBP6.71□□□□□ -1.34
VPS33A-203ENST00000536212 C17orf53Q8N3J3 647 aaPredicted RBP6.71□□□□□ -1.34
VPS33A-203ENST00000536212 NSUN7Q8NE18 718 aaKnown RBP6.71□□□□□ -1.34
VPS33A-203ENST00000536212 CDK15Q96Q40 435 aa6.71□□□□□ -1.34
VPS33A-203ENST00000536212 C1QTNF2Q9BXJ5 285 aa6.71□□□□□ -1.34
VPS33A-203ENST00000536212 ATG3Q9NT62 314 aa6.71□□□□□ -1.34
VPS33A-203ENST00000536212 CFAP45Q9UL16 551 aa6.71□□□□□ -1.34
VPS33A-203ENST00000536212 TCHHQ07283 1943 aa6.71□□□□□ -1.34
VPS33A-203ENST00000536212 COL18A1P39060 1754 aa6.71□□□□□ -1.34
VPS33A-203ENST00000536212 SALL1Q9NSC2 1324 aa6.71□□□□□ -1.34
VPS33A-203ENST00000536212 A0A087WZG4 1122 aa6.7□□□□□ -1.34
VPS33A-203ENST00000536212 GOLGA6L4A6NEF3 574 aa6.7□□□□□ -1.34
VPS33A-203ENST00000536212 CYP27B1O15528 508 aa6.7□□□□□ -1.34
VPS33A-203ENST00000536212 CIAO1O76071 339 aa6.7□□□□□ -1.34
VPS33A-203ENST00000536212 RASA1P20936 1047 aa6.7□□□□□ -1.34
VPS33A-203ENST00000536212 PTGS1P23219 599 aa6.7□□□□□ -1.34
VPS33A-203ENST00000536212 IRS1P35568 1242 aa6.7□□□□□ -1.34
VPS33A-203ENST00000536212 ZNF165P49910 485 aa6.7□□□□□ -1.34
VPS33A-203ENST00000536212 SYCP1Q15431 976 aa6.7□□□□□ -1.34
VPS33A-203ENST00000536212 NBPF20Q3BBV1 942 aa6.7□□□□□ -1.34
VPS33A-203ENST00000536212 C6orf118Q5T5N4 469 aa6.7□□□□□ -1.34
VPS33A-203ENST00000536212 CCDC129Q6ZRS4 1044 aa6.7□□□□□ -1.34
VPS33A-203ENST00000536212 UBE3BQ7Z3V4 1068 aa6.7□□□□□ -1.34
VPS33A-203ENST00000536212 TRIM50Q86XT4 487 aa6.7□□□□□ -1.34
VPS33A-203ENST00000536212 ANKRD7Q92527 254 aa6.7□□□□□ -1.34
VPS33A-203ENST00000536212 ZNF274Q96GC6 653 aaPredicted RBP6.7□□□□□ -1.34
VPS33A-203ENST00000536212 SEC62Q99442 399 aaKnown RBP6.7□□□□□ -1.34
VPS33A-203ENST00000536212 CCDC94Q9BW85 323 aaPredicted RBP6.7□□□□□ -1.34
VPS33A-203ENST00000536212 C19orf44Q9H6X5 657 aa6.7□□□□□ -1.34
VPS33A-203ENST00000536212 ZFAND3Q9H8U3 227 aa6.7□□□□□ -1.34
VPS33A-203ENST00000536212 CDV3Q9UKY7 258 aaKnown RBP6.7□□□□□ -1.34
VPS33A-203ENST00000536212 ZMIZ1Q9ULJ6 1067 aa6.7□□□□□ -1.34
VPS33A-203ENST00000536212 DOLKQ9UPQ8 538 aa6.7□□□□□ -1.34
VPS33A-203ENST00000536212 KIF3AQ9Y496 699 aa6.7□□□□□ -1.34
VPS33A-203ENST00000536212 ADAMTSL3P82987 1691 aa6.7□□□□□ -1.34
VPS33A-203ENST00000536212 PKD1L3Q7Z443 1732 aa6.7□□□□□ -1.34
VPS33A-203ENST00000536212 CPDO75976 1380 aa6.69□□□□□ -1.34
VPS33A-203ENST00000536212 DCCP43146 1447 aa6.69□□□□□ -1.34
VPS33A-203ENST00000536212 H3BQV1 296 aa6.69□□□□□ -1.34
VPS33A-203ENST00000536212 NEMFO60524 1076 aa6.69□□□□□ -1.34
VPS33A-203ENST00000536212 ZIC2O95409 532 aaPredicted RBP6.69□□□□□ -1.34
VPS33A-203ENST00000536212 IL15P40933 162 aaPredicted RBP6.69□□□□□ -1.34
VPS33A-203ENST00000536212 ZC3H6P61129 1189 aaKnown RBP6.69□□□□□ -1.34
VPS33A-203ENST00000536212 STK3Q13188 491 aa6.69□□□□□ -1.34
VPS33A-203ENST00000536212 CAMK4Q16566 473 aa6.69□□□□□ -1.34
VPS33A-203ENST00000536212 CRTC2Q53ET0 693 aaPredicted RBP6.69□□□□□ -1.34
VPS33A-203ENST00000536212 ZSCAN25Q6NSZ9 544 aa6.69□□□□□ -1.34
VPS33A-203ENST00000536212 NBPF10Q6P3W6 841 aaKnown RBP6.69□□□□□ -1.34
VPS33A-203ENST00000536212 LMBR1LQ6UX01 489 aa6.69□□□□□ -1.34
VPS33A-203ENST00000536212 CCDC186Q7Z3E2 898 aa6.69□□□□□ -1.34
VPS33A-203ENST00000536212 CKAP2LQ8IYA6 745 aa6.69□□□□□ -1.34
VPS33A-203ENST00000536212 TRMT44Q8IYL2 757 aaKnown RBP6.69□□□□□ -1.34
VPS33A-203ENST00000536212 TTC5Q8N0Z6 440 aa6.69□□□□□ -1.34
VPS33A-203ENST00000536212 SVOPQ8N4V2 548 aa6.69□□□□□ -1.34
VPS33A-203ENST00000536212 NBPF15Q8N660 670 aa6.69□□□□□ -1.34
VPS33A-203ENST00000536212 SPC24Q8NBT2 197 aa6.69□□□□□ -1.34
VPS33A-203ENST00000536212 ENGASEQ8NFI3 743 aa6.69□□□□□ -1.34
VPS33A-203ENST00000536212 BICD2Q8TD16 824 aa6.69□□□□□ -1.34
VPS33A-203ENST00000536212 STK32AQ8WU08 396 aa6.69□□□□□ -1.34
VPS33A-203ENST00000536212 NANOS1Q8WY41 292 aaKnown RBP6.69□□□□□ -1.34
VPS33A-203ENST00000536212 ITPKCQ96DU7 683 aa6.69□□□□□ -1.34
VPS33A-203ENST00000536212 MRFAP1L1Q96HT8 127 aa6.69□□□□□ -1.34
VPS33A-203ENST00000536212 ZNF396Q96N95 335 aaPredicted RBP6.69□□□□□ -1.34
VPS33A-203ENST00000536212 KCND1Q9NSA2 647 aa6.69□□□□□ -1.34
VPS33A-203ENST00000536212 NLRP2Q9NX02 1062 aa6.69□□□□□ -1.34
VPS33A-203ENST00000536212 DNMT3LQ9UJW3 386 aa6.69□□□□□ -1.34
VPS33A-203ENST00000536212 NOD1Q9Y239 953 aa6.69□□□□□ -1.34
VPS33A-203ENST00000536212 PARP4Q9UKK3 1724 aaKnown RBP6.69□□□□□ -1.34
VPS33A-203ENST00000536212 SOS2Q07890 1332 aaPredicted RBP6.69□□□□□ -1.34
VPS33A-203ENST00000536212 LAMB4A4D0S4 1761 aa6.68□□□□□ -1.34
VPS33A-203ENST00000536212 A0A1W2PQ27 194 aa6.68□□□□□ -1.34
VPS33A-203ENST00000536212 A0A1W2PQ64 194 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms