RNA–Protein interactions for RNA: ENST00000536194.1

TNFRSF1A-208, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-208ENST00000536194 APPP05067 770 aa13.55□□□□□ -0.24
TNFRSF1A-208ENST00000536194 BRI3BPQ8WY22 251 aa13.55□□□□□ -0.24
TNFRSF1A-208ENST00000536194 DDRGK1Q96HY6 314 aa13.55□□□□□ -0.24
TNFRSF1A-208ENST00000536194 PICK1Q9NRD5 415 aa13.55□□□□□ -0.24
TNFRSF1A-208ENST00000536194 DIAPH3Q9NSV4 1193 aa13.55□□□□□ -0.24
TNFRSF1A-208ENST00000536194 ARPP21Q9UBL0 812 aaPredicted RBP13.55□□□□□ -0.24
TNFRSF1A-208ENST00000536194 KCNH4Q9UQ05 1017 aa13.55□□□□□ -0.24
TNFRSF1A-208ENST00000536194 AFG3L2Q9Y4W6 797 aa13.55□□□□□ -0.24
TNFRSF1A-208ENST00000536194 ZHX2Q9Y6X8 837 aa13.55□□□□□ -0.24
TNFRSF1A-208ENST00000536194 CCDC171Q6TFL3 1326 aa13.55□□□□□ -0.24
TNFRSF1A-208ENST00000536194 CHMLP26374 656 aa13.54□□□□□ -0.24
TNFRSF1A-208ENST00000536194 TDO2P48775 406 aa13.54□□□□□ -0.24
TNFRSF1A-208ENST00000536194 GTF2A2P52657 109 aa13.54□□□□□ -0.24
TNFRSF1A-208ENST00000536194 SREBF2Q12772 1141 aa13.54□□□□□ -0.24
TNFRSF1A-208ENST00000536194 MOGSQ13724 837 aa13.54□□□□□ -0.24
TNFRSF1A-208ENST00000536194 C16orf86Q6ZW13 317 aa13.54□□□□□ -0.24
TNFRSF1A-208ENST00000536194 IFNL1Q8IU54 200 aa13.54□□□□□ -0.24
TNFRSF1A-208ENST00000536194 RNF186Q9NXI6 227 aa13.54□□□□□ -0.24
TNFRSF1A-208ENST00000536194 TSKSQ9UJT2 592 aa13.54□□□□□ -0.24
TNFRSF1A-208ENST00000536194 ZBTB21Q9ULJ3 1066 aa13.54□□□□□ -0.24
TNFRSF1A-208ENST00000536194 CCL15-CCL14A0A0B4J2E2 113 aa13.53□□□□□ -0.24
TNFRSF1A-208ENST00000536194 HIP1O00291 1037 aa13.53□□□□□ -0.24
TNFRSF1A-208ENST00000536194 GH2P01242 217 aa13.53□□□□□ -0.24
TNFRSF1A-208ENST00000536194 ASNSP08243 561 aa13.53□□□□□ -0.24
TNFRSF1A-208ENST00000536194 HSPD1P10809 573 aaKnown RBP13.53□□□□□ -0.24
TNFRSF1A-208ENST00000536194 GUCY1A2P33402 732 aa13.53□□□□□ -0.24
TNFRSF1A-208ENST00000536194 CDK8P49336 464 aa13.53□□□□□ -0.24
TNFRSF1A-208ENST00000536194 SNAPC2Q13487 334 aa13.53□□□□□ -0.24
TNFRSF1A-208ENST00000536194 CCL15Q16663 113 aa13.53□□□□□ -0.24
TNFRSF1A-208ENST00000536194 CERKLQ49MI3 558 aaPredicted RBP13.53□□□□□ -0.24
TNFRSF1A-208ENST00000536194 REM2Q8IYK8 340 aaPredicted RBP13.53□□□□□ -0.24
TNFRSF1A-208ENST00000536194 NAPBQ9H115 298 aa13.53□□□□□ -0.24
TNFRSF1A-208ENST00000536194 TRIM75PA6NK02 468 aa13.52□□□□□ -0.25
TNFRSF1A-208ENST00000536194 USP17L5A8MUK1 530 aa13.52□□□□□ -0.25
TNFRSF1A-208ENST00000536194 MINDY4BA8MYZ0 360 aa13.52□□□□□ -0.25
TNFRSF1A-208ENST00000536194 CXCL11O14625 94 aa13.52□□□□□ -0.25
TNFRSF1A-208ENST00000536194 TRPA1O75762 1119 aa13.52□□□□□ -0.25
TNFRSF1A-208ENST00000536194 INHBEP58166 350 aa13.52□□□□□ -0.25
TNFRSF1A-208ENST00000536194 ALX1Q15699 326 aa13.52□□□□□ -0.25
TNFRSF1A-208ENST00000536194 BMP2KLQ5H9B9 411 aa13.52□□□□□ -0.25
TNFRSF1A-208ENST00000536194 AMOTL1Q8IY63 956 aa13.52□□□□□ -0.25
TNFRSF1A-208ENST00000536194 STK11IPQ8N1F8 1099 aa13.52□□□□□ -0.25
TNFRSF1A-208ENST00000536194 FAM43AQ8N2R8 423 aa13.52□□□□□ -0.25
TNFRSF1A-208ENST00000536194 NACAP1Q9BZK3 213 aa13.52□□□□□ -0.25
TNFRSF1A-208ENST00000536194 SWAP70Q9UH65 585 aa13.52□□□□□ -0.25
TNFRSF1A-208ENST00000536194 TACC3Q9Y6A5 838 aa13.52□□□□□ -0.25
TNFRSF1A-208ENST00000536194 A0A0G2JLL6 359 aaPredicted RBP13.51□□□□□ -0.25
TNFRSF1A-208ENST00000536194 BTBD19C9JJ37 291 aa13.51□□□□□ -0.25
TNFRSF1A-208ENST00000536194 FGAP02671 866 aa13.51□□□□□ -0.25
TNFRSF1A-208ENST00000536194 HSPA8P11142 646 aaKnown RBP13.51□□□□□ -0.25
TNFRSF1A-208ENST00000536194 CETPP11597 493 aa13.51□□□□□ -0.25
TNFRSF1A-208ENST00000536194 AKR1B1P15121 316 aa13.51□□□□□ -0.25
TNFRSF1A-208ENST00000536194 PPARAQ07869 468 aa13.51□□□□□ -0.25
TNFRSF1A-208ENST00000536194 SPP2Q13103 211 aa13.51□□□□□ -0.25
TNFRSF1A-208ENST00000536194 DGKZQ13574 1117 aa13.51□□□□□ -0.25
TNFRSF1A-208ENST00000536194 ABCB5Q2M3G0 1257 aa13.51□□□□□ -0.25
TNFRSF1A-208ENST00000536194 PRRT2Q7Z6L0 340 aaPredicted RBP13.51□□□□□ -0.25
TNFRSF1A-208ENST00000536194 ZNF280CQ8ND82 737 aa13.51□□□□□ -0.25
TNFRSF1A-208ENST00000536194 BEGAINQ9BUH8 593 aa13.51□□□□□ -0.25
TNFRSF1A-208ENST00000536194 R3HDMLQ9H3Y0 253 aa13.51□□□□□ -0.25
TNFRSF1A-208ENST00000536194 GINM1Q9NU53 330 aa13.51□□□□□ -0.25
TNFRSF1A-208ENST00000536194 SAGE1Q9NXZ1 904 aa13.51□□□□□ -0.25
TNFRSF1A-208ENST00000536194 TAOK2Q9UL54 1235 aa13.51□□□□□ -0.25
TNFRSF1A-208ENST00000536194 CASP8AP2Q9UKL3 1982 aa13.51□□□□□ -0.25
TNFRSF1A-208ENST00000536194 ZMYM6O95789 1325 aa13.5□□□□□ -0.25
TNFRSF1A-208ENST00000536194 RAD50Q92878 1312 aa13.5□□□□□ -0.25
TNFRSF1A-208ENST00000536194 CA12O43570 354 aa13.5□□□□□ -0.25
TNFRSF1A-208ENST00000536194 TBC1D8O95759 1140 aa13.5□□□□□ -0.25
TNFRSF1A-208ENST00000536194 RASA1P20936 1047 aa13.5□□□□□ -0.25
TNFRSF1A-208ENST00000536194 CTDSPL2Q05D32 466 aa13.5□□□□□ -0.25
TNFRSF1A-208ENST00000536194 SEPT2Q15019 361 aa13.5□□□□□ -0.25
TNFRSF1A-208ENST00000536194 GPAT2Q6NUI2 795 aa13.5□□□□□ -0.25
TNFRSF1A-208ENST00000536194 CLEC10AQ8IUN9 316 aa13.5□□□□□ -0.25
TNFRSF1A-208ENST00000536194 WDR18Q9BV38 432 aa13.5□□□□□ -0.25
TNFRSF1A-208ENST00000536194 NBPF3Q9H094 633 aa13.5□□□□□ -0.25
TNFRSF1A-208ENST00000536194 MYH4Q9Y623 1939 aa13.5□□□□□ -0.25
TNFRSF1A-208ENST00000536194 SGSM2O43147 1006 aa13.49□□□□□ -0.25
TNFRSF1A-208ENST00000536194 PRDM1O75626 825 aa13.49□□□□□ -0.25
TNFRSF1A-208ENST00000536194 LBX1P52954 281 aa13.49□□□□□ -0.25
TNFRSF1A-208ENST00000536194 MFAP1P55081 439 aaKnown RBP13.49□□□□□ -0.25
TNFRSF1A-208ENST00000536194 MTMR2Q13614 643 aa13.49□□□□□ -0.25
TNFRSF1A-208ENST00000536194 RAB3GAP1Q15042 981 aa13.49□□□□□ -0.25
TNFRSF1A-208ENST00000536194 DSCC1Q9BVC3 393 aa13.49□□□□□ -0.25
TNFRSF1A-208ENST00000536194 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.49□□□□□ -0.25
TNFRSF1A-208ENST00000536194 CFHR5Q9BXR6 569 aa13.49□□□□□ -0.25
TNFRSF1A-208ENST00000536194 TBC1D2Q9BYX2 928 aa13.49□□□□□ -0.25
TNFRSF1A-208ENST00000536194 INCENPQ9NQS7 918 aa13.49□□□□□ -0.25
TNFRSF1A-208ENST00000536194 ANAPC4Q9UJX5 808 aa13.49□□□□□ -0.25
TNFRSF1A-208ENST00000536194 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.49□□□□□ -0.25
TNFRSF1A-208ENST00000536194 MPHOSPH10O00566 681 aaKnown RBP13.48□□□□□ -0.25
TNFRSF1A-208ENST00000536194 CTCFP49711 727 aaPredicted RBP13.48□□□□□ -0.25
TNFRSF1A-208ENST00000536194 HMGCS2P54868 508 aa13.48□□□□□ -0.25
TNFRSF1A-208ENST00000536194 CRHR2Q13324 411 aa13.48□□□□□ -0.25
TNFRSF1A-208ENST00000536194 SH3D19Q5HYK7 790 aa13.48□□□□□ -0.25
TNFRSF1A-208ENST00000536194 TREML2Q5T2D2 321 aa13.48□□□□□ -0.25
TNFRSF1A-208ENST00000536194 TMEM179Q6ZVK1 233 aa13.48□□□□□ -0.25
TNFRSF1A-208ENST00000536194 ANKRD23Q86SG2 305 aa13.48□□□□□ -0.25
TNFRSF1A-208ENST00000536194 SIAH1Q8IUQ4 282 aa13.48□□□□□ -0.25
TNFRSF1A-208ENST00000536194 ACER1Q8TDN7 264 aa13.48□□□□□ -0.25
TNFRSF1A-208ENST00000536194 CCDC17Q96LX7 622 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms