RNA–Protein interactions for RNA: ENST00000535818.1

VPS37C-202, Transcript of VPS37C, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37C, Length 865 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37C-202ENST00000535818 ARPP21Q9UBL0 812 aaPredicted RBP26.62■■□□□ 1.85
VPS37C-202ENST00000535818 ZBTB21Q9ULJ3 1066 aa26.62■■□□□ 1.85
VPS37C-202ENST00000535818 EVX2Q03828 476 aa26.61■■□□□ 1.85
VPS37C-202ENST00000535818 GABPAQ06546 454 aa26.61■■□□□ 1.85
VPS37C-202ENST00000535818 GADL1Q6ZQY3 521 aa26.61■■□□□ 1.85
VPS37C-202ENST00000535818 CYP2D7A0A087X1C5 515 aa26.6■■□□□ 1.85
VPS37C-202ENST00000535818 A0A0G2JLL6 359 aaPredicted RBP26.6■■□□□ 1.85
VPS37C-202ENST00000535818 GSG1L2A8MUP6 293 aa26.6■■□□□ 1.85
VPS37C-202ENST00000535818 GPR25O00155 361 aa26.6■■□□□ 1.85
VPS37C-202ENST00000535818 SHMT1P34896 483 aa26.6■■□□□ 1.85
VPS37C-202ENST00000535818 TDO2P48775 406 aa26.6■■□□□ 1.85
VPS37C-202ENST00000535818 SPP2Q13103 211 aa26.6■■□□□ 1.85
VPS37C-202ENST00000535818 CRHR2Q13324 411 aa26.6■■□□□ 1.85
VPS37C-202ENST00000535818 C12orf60Q5U649 245 aa26.6■■□□□ 1.85
VPS37C-202ENST00000535818 GIMAP6Q6P9H5 292 aa26.6■■□□□ 1.85
VPS37C-202ENST00000535818 FASTKD5Q7L8L6 764 aaKnown RBP26.6■■□□□ 1.85
VPS37C-202ENST00000535818 PRRT2Q7Z6L0 340 aaPredicted RBP26.6■■□□□ 1.85
VPS37C-202ENST00000535818 ZNF280CQ8ND82 737 aa26.6■■□□□ 1.85
VPS37C-202ENST00000535818 ZFYVE28Q9HCC9 887 aa26.6■■□□□ 1.85
VPS37C-202ENST00000535818 ZCCHC17Q9NP64 241 aaKnown RBP26.6■■□□□ 1.85
VPS37C-202ENST00000535818 CABP5Q9NP86 173 aa26.6■■□□□ 1.85
VPS37C-202ENST00000535818 SWAP70Q9UH65 585 aa26.6■■□□□ 1.85
VPS37C-202ENST00000535818 CASP8AP2Q9UKL3 1982 aa26.6■■□□□ 1.85
VPS37C-202ENST00000535818 GH2P01242 217 aa26.59■■□□□ 1.85
VPS37C-202ENST00000535818 JAG1P78504 1218 aa26.59■■□□□ 1.85
VPS37C-202ENST00000535818 ABCB5Q2M3G0 1257 aa26.59■■□□□ 1.85
VPS37C-202ENST00000535818 SHROOM1Q2M3G4 852 aaPredicted RBP26.59■■□□□ 1.85
VPS37C-202ENST00000535818 CTR9Q6PD62 1173 aa26.59■■□□□ 1.85
VPS37C-202ENST00000535818 ANKRD23Q86SG2 305 aa26.59■■□□□ 1.85
VPS37C-202ENST00000535818 TICAM2Q86XR7 235 aa26.59■■□□□ 1.85
VPS37C-202ENST00000535818 DYNLL2Q96FJ2 89 aa26.59■■□□□ 1.85
VPS37C-202ENST00000535818 NACAP1Q9BZK3 213 aa26.59■■□□□ 1.85
VPS37C-202ENST00000535818 R3HDMLQ9H3Y0 253 aa26.59■■□□□ 1.85
VPS37C-202ENST00000535818 PATL2C9JE40 543 aaKnown RBP26.58■■□□□ 1.85
VPS37C-202ENST00000535818 CCDC129Q6ZRS4 1044 aa26.58■■□□□ 1.85
VPS37C-202ENST00000535818 HELLSQ9NRZ9 838 aa26.58■■□□□ 1.85
VPS37C-202ENST00000535818 TAOK2Q9UL54 1235 aa26.58■■□□□ 1.85
VPS37C-202ENST00000535818 PDHXO00330 501 aa26.57■■□□□ 1.84
VPS37C-202ENST00000535818 NOM1Q5C9Z4 860 aaKnown RBP26.57■■□□□ 1.84
VPS37C-202ENST00000535818 CENPQQ7L2Z9 268 aaPredicted RBP26.57■■□□□ 1.84
VPS37C-202ENST00000535818 TNS4Q8IZW8 715 aa26.57■■□□□ 1.84
VPS37C-202ENST00000535818 SLC44A5Q8NCS7 719 aa26.57■■□□□ 1.84
VPS37C-202ENST00000535818 ZNF296Q8WUU4 475 aaPredicted RBP26.57■■□□□ 1.84
VPS37C-202ENST00000535818 EPB41L4AQ9HCS5 686 aaPredicted RBP26.57■■□□□ 1.84
VPS37C-202ENST00000535818 PTPRFP10586 1907 aa26.57■■□□□ 1.84
VPS37C-202ENST00000535818 MINDY4BA8MYZ0 360 aa26.56■■□□□ 1.84
VPS37C-202ENST00000535818 MPHOSPH10O00566 681 aaKnown RBP26.56■■□□□ 1.84
VPS37C-202ENST00000535818 NMIQ13287 307 aaPredicted RBP26.56■■□□□ 1.84
VPS37C-202ENST00000535818 MOGSQ13724 837 aa26.56■■□□□ 1.84
VPS37C-202ENST00000535818 RAB3GAP1Q15042 981 aa26.56■■□□□ 1.84
VPS37C-202ENST00000535818 SBK1Q52WX2 424 aa26.56■■□□□ 1.84
VPS37C-202ENST00000535818 IFNL3Q8IZI9 196 aa26.56■■□□□ 1.84
VPS37C-202ENST00000535818 FAM227BQ96M60 508 aa26.56■■□□□ 1.84
VPS37C-202ENST00000535818 WDR18Q9BV38 432 aa26.56■■□□□ 1.84
VPS37C-202ENST00000535818 MYH8P13535 1937 aa26.56■■□□□ 1.84
VPS37C-202ENST00000535818 A0A0D9SFI3 127 aa26.55■■□□□ 1.84
VPS37C-202ENST00000535818 FKTNO75072 461 aa26.55■■□□□ 1.84
VPS37C-202ENST00000535818 MCMDC2Q4G0Z9 681 aa26.55■■□□□ 1.84
VPS37C-202ENST00000535818 TTC22Q5TAA0 569 aa26.55■■□□□ 1.84
VPS37C-202ENST00000535818 NAPBQ9H115 298 aa26.55■■□□□ 1.84
VPS37C-202ENST00000535818 DIAPH3Q9NSV4 1193 aa26.55■■□□□ 1.84
VPS37C-202ENST00000535818 SMIM22K7EJ46 135 aa26.54■■□□□ 1.84
VPS37C-202ENST00000535818 SDSP20132 328 aa26.54■■□□□ 1.84
VPS37C-202ENST00000535818 CDK8P49336 464 aa26.54■■□□□ 1.84
VPS37C-202ENST00000535818 HMGCS2P54868 508 aa26.54■■□□□ 1.84
VPS37C-202ENST00000535818 MTMR2Q13614 643 aa26.54■■□□□ 1.84
VPS37C-202ENST00000535818 C16orf86Q6ZW13 317 aa26.54■■□□□ 1.84
VPS37C-202ENST00000535818 HIP1O00291 1037 aa26.53■■□□□ 1.84
VPS37C-202ENST00000535818 GPAT2Q6NUI2 795 aa26.53■■□□□ 1.84
VPS37C-202ENST00000535818 STK11IPQ8N1F8 1099 aa26.53■■□□□ 1.84
VPS37C-202ENST00000535818 PROCA1Q8NCQ7 364 aaPredicted RBP26.53■■□□□ 1.84
VPS37C-202ENST00000535818 CCDC136Q96JN2 1154 aa26.53■■□□□ 1.84
VPS37C-202ENST00000535818 PARK7Q99497 189 aaKnown RBP26.53■■□□□ 1.84
VPS37C-202ENST00000535818 TMOD4Q9NZQ9 345 aa26.53■■□□□ 1.84
VPS37C-202ENST00000535818 USP17L10C9JJH3 530 aa26.52■■□□□ 1.84
VPS37C-202ENST00000535818 BACE1P56817 501 aa26.52■■□□□ 1.84
VPS37C-202ENST00000535818 FEZ1Q99689 392 aa26.52■■□□□ 1.84
VPS37C-202ENST00000535818 AGTPBP1Q9UPW5 1226 aa26.52■■□□□ 1.84
VPS37C-202ENST00000535818 LOC285556D6RIA3 1793 aa26.51■■□□□ 1.83
VPS37C-202ENST00000535818 TLR2O60603 784 aa26.51■■□□□ 1.83
VPS37C-202ENST00000535818 GSPT1P15170 499 aaKnown RBP26.51■■□□□ 1.83
VPS37C-202ENST00000535818 CCDC17Q96LX7 622 aa26.51■■□□□ 1.83
VPS37C-202ENST00000535818 ROBO3Q96MS0 1386 aa26.5■■□□□ 1.83
VPS37C-202ENST00000535818 C19orf81C9J6K1 198 aa26.5■■□□□ 1.83
VPS37C-202ENST00000535818 MFAP1P55081 439 aaKnown RBP26.5■■□□□ 1.83
VPS37C-202ENST00000535818 DGKZQ13574 1117 aa26.5■■□□□ 1.83
VPS37C-202ENST00000535818 SEPT2Q15019 361 aa26.5■■□□□ 1.83
VPS37C-202ENST00000535818 SH3D19Q5HYK7 790 aa26.5■■□□□ 1.83
VPS37C-202ENST00000535818 TMEM179Q6ZVK1 233 aa26.5■■□□□ 1.83
VPS37C-202ENST00000535818 MKNK2Q9HBH9 465 aa26.5■■□□□ 1.83
VPS37C-202ENST00000535818 SLC45A1Q9Y2W3 748 aa26.5■■□□□ 1.83
VPS37C-202ENST00000535818 CCDC171Q6TFL3 1326 aa26.49■■□□□ 1.83
VPS37C-202ENST00000535818 AKR1B1P15121 316 aa26.49■■□□□ 1.83
VPS37C-202ENST00000535818 SP3Q02447 781 aa26.49■■□□□ 1.83
VPS37C-202ENST00000535818 PABPC4Q13310 644 aaKnown RBP eCLIP26.49■■□□□ 1.83
VPS37C-202ENST00000535818 TREML2Q5T2D2 321 aa26.49■■□□□ 1.83
VPS37C-202ENST00000535818 VPS53Q5VIR6 699 aa26.49■■□□□ 1.83
VPS37C-202ENST00000535818 ERICH6BQ5W0A0 696 aa26.49■■□□□ 1.83
VPS37C-202ENST00000535818 CWC27Q6UX04 472 aaKnown RBP26.49■■□□□ 1.83
VPS37C-202ENST00000535818 ERO1AQ96HE7 468 aa26.49■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms