RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.38□□□□□ -0.11
CHD4-203ENST00000535717 SWAP70Q9UH65 585 aa14.38□□□□□ -0.11
CHD4-203ENST00000535717 DOCK1Q14185 1865 aa14.38□□□□□ -0.11
CHD4-203ENST00000535717 PTPRAP18433 802 aa14.37□□□□□ -0.11
CHD4-203ENST00000535717 PTH1RQ03431 593 aa14.37□□□□□ -0.11
CHD4-203ENST00000535717 NOGQ13253 232 aa14.37□□□□□ -0.11
CHD4-203ENST00000535717 CERKLQ49MI3 558 aaPredicted RBP14.37□□□□□ -0.11
CHD4-203ENST00000535717 OTUD5Q96G74 571 aa14.37□□□□□ -0.11
CHD4-203ENST00000535717 PICK1Q9NRD5 415 aa14.37□□□□□ -0.11
CHD4-203ENST00000535717 ANAPC4Q9UJX5 808 aa14.37□□□□□ -0.11
CHD4-203ENST00000535717 GH2P01242 217 aa14.36□□□□□ -0.11
CHD4-203ENST00000535717 ZBTB48P10074 688 aaPredicted RBP14.36□□□□□ -0.11
CHD4-203ENST00000535717 KIF23Q02241 960 aaPredicted RBP14.36□□□□□ -0.11
CHD4-203ENST00000535717 CTDSPL2Q05D32 466 aa14.36□□□□□ -0.11
CHD4-203ENST00000535717 PPATQ06203 517 aa14.36□□□□□ -0.11
CHD4-203ENST00000535717 CASC1Q6TDU7 716 aa14.36□□□□□ -0.11
CHD4-203ENST00000535717 CCDC84Q86UT8 332 aaPredicted RBP14.36□□□□□ -0.11
CHD4-203ENST00000535717 ZBTB21Q9ULJ3 1066 aa14.36□□□□□ -0.11
CHD4-203ENST00000535717 TACC3Q9Y6A5 838 aa14.36□□□□□ -0.11
CHD4-203ENST00000535717 ZHX2Q9Y6X8 837 aa14.36□□□□□ -0.11
CHD4-203ENST00000535717 ATAD5Q96QE3 1844 aa14.36□□□□□ -0.11
CHD4-203ENST00000535717 IRF6O14896 467 aa14.35□□□□□ -0.11
CHD4-203ENST00000535717 SLC3A2P08195 630 aaKnown RBP14.35□□□□□ -0.11
CHD4-203ENST00000535717 ASNSP08243 561 aa14.35□□□□□ -0.11
CHD4-203ENST00000535717 AKR1B1P15121 316 aa14.35□□□□□ -0.11
CHD4-203ENST00000535717 MAP2K2P36507 400 aa14.35□□□□□ -0.11
CHD4-203ENST00000535717 HAND2P61296 217 aa14.35□□□□□ -0.11
CHD4-203ENST00000535717 PPIL2Q13356 520 aa14.35□□□□□ -0.11
CHD4-203ENST00000535717 ABCB5Q2M3G0 1257 aa14.35□□□□□ -0.11
CHD4-203ENST00000535717 LSG1Q9H089 658 aaKnown RBP14.35□□□□□ -0.11
CHD4-203ENST00000535717 NBPF3Q9H094 633 aa14.35□□□□□ -0.11
CHD4-203ENST00000535717 INCENPQ9NQS7 918 aa14.35□□□□□ -0.11
CHD4-203ENST00000535717 GINM1Q9NU53 330 aa14.35□□□□□ -0.11
CHD4-203ENST00000535717 THSD7BQ9C0I4 1608 aa14.34□□□□□ -0.11
CHD4-203ENST00000535717 PRDM1O75626 825 aa14.34□□□□□ -0.11
CHD4-203ENST00000535717 RASA1P20936 1047 aa14.34□□□□□ -0.11
CHD4-203ENST00000535717 GUCY1A2P33402 732 aa14.34□□□□□ -0.11
CHD4-203ENST00000535717 KIAA1211Q6ZU35 1233 aa14.34□□□□□ -0.11
CHD4-203ENST00000535717 MAP4K1Q92918 833 aa14.34□□□□□ -0.11
CHD4-203ENST00000535717 CCDC17Q96LX7 622 aa14.34□□□□□ -0.11
CHD4-203ENST00000535717 MKNK2Q9HBH9 465 aa14.34□□□□□ -0.11
CHD4-203ENST00000535717 CTNNA3Q9UI47 895 aa14.34□□□□□ -0.11
CHD4-203ENST00000535717 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.34□□□□□ -0.11
CHD4-203ENST00000535717 AFG3L2Q9Y4W6 797 aa14.34□□□□□ -0.11
CHD4-203ENST00000535717 MYH8P13535 1937 aa14.34□□□□□ -0.11
CHD4-203ENST00000535717 PHIPQ8WWQ0 1821 aa14.34□□□□□ -0.11
CHD4-203ENST00000535717 USP17L5A8MUK1 530 aa14.33□□□□□ -0.12
CHD4-203ENST00000535717 MPHOSPH10O00566 681 aaKnown RBP14.33□□□□□ -0.12
CHD4-203ENST00000535717 ZNF213O14771 459 aa14.33□□□□□ -0.12
CHD4-203ENST00000535717 FGRP09769 529 aa14.33□□□□□ -0.12
CHD4-203ENST00000535717 PDE4BQ07343 736 aa14.33□□□□□ -0.12
CHD4-203ENST00000535717 SEPT2Q15019 361 aa14.33□□□□□ -0.12
CHD4-203ENST00000535717 MS4A4AQ96JQ5 239 aa14.33□□□□□ -0.12
CHD4-203ENST00000535717 ZNF287Q9HBT7 754 aa14.33□□□□□ -0.12
CHD4-203ENST00000535717 CABP5Q9NP86 173 aa14.33□□□□□ -0.12
CHD4-203ENST00000535717 ANO2Q9NQ90 1003 aa14.33□□□□□ -0.12
CHD4-203ENST00000535717 KCNH4Q9UQ05 1017 aa14.33□□□□□ -0.12
CHD4-203ENST00000535717 U3KPZ7 1027 aaPredicted RBP14.33□□□□□ -0.12
CHD4-203ENST00000535717 LAMA4Q16363 1823 aa14.32□□□□□ -0.12
CHD4-203ENST00000535717 MANSC4A6NHS7 340 aaPredicted RBP14.32□□□□□ -0.12
CHD4-203ENST00000535717 CXCL11O14625 94 aa14.32□□□□□ -0.12
CHD4-203ENST00000535717 GTF2A2P52657 109 aa14.32□□□□□ -0.12
CHD4-203ENST00000535717 SNAPC2Q13487 334 aa14.32□□□□□ -0.12
CHD4-203ENST00000535717 RAB3GAP1Q15042 981 aa14.32□□□□□ -0.12
CHD4-203ENST00000535717 IMMTQ16891 758 aaKnown RBP14.32□□□□□ -0.12
CHD4-203ENST00000535717 TMEM179Q6ZVK1 233 aa14.32□□□□□ -0.12
CHD4-203ENST00000535717 TBC1D10CQ8IV04 446 aa14.32□□□□□ -0.12
CHD4-203ENST00000535717 JMYQ8N9B5 988 aa14.32□□□□□ -0.12
CHD4-203ENST00000535717 ZNF280CQ8ND82 737 aa14.32□□□□□ -0.12
CHD4-203ENST00000535717 WDR18Q9BV38 432 aa14.32□□□□□ -0.12
CHD4-203ENST00000535717 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.32□□□□□ -0.12
CHD4-203ENST00000535717 RBM8AQ9Y5S9 174 aaKnown RBP14.32□□□□□ -0.12
CHD4-203ENST00000535717 TESPA1A2RU30 521 aaPredicted RBP14.31□□□□□ -0.12
CHD4-203ENST00000535717 TRIM75PA6NK02 468 aa14.31□□□□□ -0.12
CHD4-203ENST00000535717 ORC4O43929 436 aa14.31□□□□□ -0.12
CHD4-203ENST00000535717 TM4SF4P48230 202 aa14.31□□□□□ -0.12
CHD4-203ENST00000535717 SPP2Q13103 211 aa14.31□□□□□ -0.12
CHD4-203ENST00000535717 AKNAD1Q5T1N1 836 aa14.31□□□□□ -0.12
CHD4-203ENST00000535717 ZNF444Q8N0Y2 327 aaPredicted RBP14.31□□□□□ -0.12
CHD4-203ENST00000535717 STAG1Q8WVM7 1258 aa14.31□□□□□ -0.12
CHD4-203ENST00000535717 BRI3BPQ8WY22 251 aa14.31□□□□□ -0.12
CHD4-203ENST00000535717 TBC1D2Q9BYX2 928 aa14.31□□□□□ -0.12
CHD4-203ENST00000535717 CCL15-CCL14A0A0B4J2E2 113 aa14.3□□□□□ -0.12
CHD4-203ENST00000535717 A0A0G2JLL6 359 aaPredicted RBP14.3□□□□□ -0.12
CHD4-203ENST00000535717 CYP21A2P08686 494 aa14.3□□□□□ -0.12
CHD4-203ENST00000535717 CETPP11597 493 aa14.3□□□□□ -0.12
CHD4-203ENST00000535717 INHBEP58166 350 aa14.3□□□□□ -0.12
CHD4-203ENST00000535717 SREBF2Q12772 1141 aa14.3□□□□□ -0.12
CHD4-203ENST00000535717 MOGSQ13724 837 aa14.3□□□□□ -0.12
CHD4-203ENST00000535717 CCL15Q16663 113 aa14.3□□□□□ -0.12
CHD4-203ENST00000535717 FAM47AQ5JRC9 791 aa14.3□□□□□ -0.12
CHD4-203ENST00000535717 MFSD6Q6ZSS7 791 aa14.3□□□□□ -0.12
CHD4-203ENST00000535717 PRRT2Q7Z6L0 340 aaPredicted RBP14.3□□□□□ -0.12
CHD4-203ENST00000535717 CLEC10AQ8IUN9 316 aa14.3□□□□□ -0.12
CHD4-203ENST00000535717 SIAH1Q8IUQ4 282 aa14.3□□□□□ -0.12
CHD4-203ENST00000535717 REM2Q8IYK8 340 aaPredicted RBP14.3□□□□□ -0.12
CHD4-203ENST00000535717 NKX2-3Q8TAU0 364 aa14.3□□□□□ -0.12
CHD4-203ENST00000535717 ACER1Q8TDN7 264 aa14.3□□□□□ -0.12
CHD4-203ENST00000535717 PTPN18Q99952 460 aa14.3□□□□□ -0.12
CHD4-203ENST00000535717 AS3MTQ9HBK9 375 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms