RNA–Protein interactions for RNA: ENST00000535492.5

RAP1B-215, Transcript of RAP1B, member of RAS oncogene family, human

TSL 4

Gene RAP1B, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-215	ENST00000535492	DPF3	Q92784	378 aa		29.03	■■■□□ 2.24
RAP1B-215	ENST00000535492	WDR18	Q9BV38	432 aa		29.03	■■■□□ 2.24
RAP1B-215	ENST00000535492	COLQ	Q9Y215	455 aa	Predicted RBP	29.03	■■■□□ 2.24
RAP1B-215	ENST00000535492	NAV1	Q8NEY1	1877 aa		29.03	■■■□□ 2.24
RAP1B-215	ENST00000535492	ZBED9	Q6R2W3	1325 aa		29.02	■■■□□ 2.24
RAP1B-215	ENST00000535492	UBE2Q1	Q7Z7E8	422 aa		29.02	■■■□□ 2.24
RAP1B-215	ENST00000535492	METTL16	Q86W50	562 aa	Known RBP	29.02	■■■□□ 2.24
RAP1B-215	ENST00000535492	MIGA1	Q8NAN2	632 aa		29.02	■■■□□ 2.24
RAP1B-215	ENST00000535492	HLA-DOA	P06340	250 aa		29.01	■■■□□ 2.23
RAP1B-215	ENST00000535492	BACE1	P56817	501 aa		29.01	■■■□□ 2.23
RAP1B-215	ENST00000535492	AACS	Q86V21	672 aa		29.01	■■■□□ 2.23
RAP1B-215	ENST00000535492	MAGEB6	Q8N7X4	407 aa		29.01	■■■□□ 2.23
RAP1B-215	ENST00000535492	TMOD4	Q9NZQ9	345 aa		29.01	■■■□□ 2.23
RAP1B-215	ENST00000535492	FARP2	O94887	1054 aa	Predicted RBP	29	■■■□□ 2.23
RAP1B-215	ENST00000535492	IRX3	P78415	501 aa	Predicted RBP	29	■■■□□ 2.23
RAP1B-215	ENST00000535492	ZBTB21	Q9ULJ3	1066 aa		29	■■■□□ 2.23
RAP1B-215	ENST00000535492	DDX60L	Q5H9U9	1706 aa	Known RBP	29	■■■□□ 2.23
RAP1B-215	ENST00000535492	ALPK3	Q96L96	1907 aa		28.99	■■■□□ 2.23
RAP1B-215	ENST00000535492	SGPL1	O95470	568 aa		28.99	■■■□□ 2.23
RAP1B-215	ENST00000535492	ERC1	Q8IUD2	1116 aa		28.99	■■■□□ 2.23
RAP1B-215	ENST00000535492	ANTXR1	Q9H6X2	564 aa		28.99	■■■□□ 2.23
RAP1B-215	ENST00000535492	USP5	P45974	858 aa		28.98	■■■□□ 2.23
RAP1B-215	ENST00000535492	DEFB118	Q96PH6	123 aa		28.98	■■■□□ 2.23
RAP1B-215	ENST00000535492	HTATIP2	Q9BUP3	242 aa		28.98	■■■□□ 2.23
RAP1B-215	ENST00000535492	FXR1	P51114	621 aa	Known RBP eCLIP	28.97	■■■□□ 2.23
RAP1B-215	ENST00000535492	GINM1	Q9NU53	330 aa		28.97	■■■□□ 2.23
RAP1B-215	ENST00000535492	MYH8	P13535	1937 aa		28.96	■■■□□ 2.23
RAP1B-215	ENST00000535492	C19orf81	C9J6K1	198 aa		28.96	■■■□□ 2.23
RAP1B-215	ENST00000535492	USP17L10	C9JJH3	530 aa		28.96	■■■□□ 2.23
RAP1B-215	ENST00000535492	MAP3K12	Q12852	859 aa		28.96	■■■□□ 2.23
RAP1B-215	ENST00000535492	CERS3	Q8IU89	383 aa		28.96	■■■□□ 2.23
RAP1B-215	ENST00000535492	IL1RAPL2	Q9NP60	686 aa		28.96	■■■□□ 2.23
RAP1B-215	ENST00000535492	PAK6	Q9NQU5	681 aa	Predicted RBP	28.96	■■■□□ 2.23
RAP1B-215	ENST00000535492	MORF4L1	Q9UBU8	362 aa		28.96	■■■□□ 2.23
RAP1B-215	ENST00000535492	TFRC	P02786	760 aa	Known RBP	28.95	■■■□□ 2.22
RAP1B-215	ENST00000535492	HOXA7	P31268	230 aa	Predicted RBP	28.95	■■■□□ 2.22
RAP1B-215	ENST00000535492	P2RX7	Q99572	595 aa	Known RBP	28.95	■■■□□ 2.22
RAP1B-215	ENST00000535492	PEX10	O60683	326 aa		28.94	■■■□□ 2.22
RAP1B-215	ENST00000535492	GH2	P01242	217 aa		28.93	■■■□□ 2.22
RAP1B-215	ENST00000535492	HMGCR	P04035	888 aa		28.93	■■■□□ 2.22
RAP1B-215	ENST00000535492	HERVK_113	P62684	666 aa		28.93	■■■□□ 2.22
RAP1B-215	ENST00000535492	HSP90AB4P	Q58FF6	505 aa		28.93	■■■□□ 2.22
RAP1B-215	ENST00000535492	CHRDL2	Q6WN34	429 aa		28.93	■■■□□ 2.22
RAP1B-215	ENST00000535492	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	28.93	■■■□□ 2.22	8e-42	■■■■■ 28.4
RAP1B-215	ENST00000535492	TXNRD2	Q9NNW7	524 aa		28.93	■■■□□ 2.22
RAP1B-215	ENST00000535492	GJD2	Q9UKL4	321 aa		28.93	■■■□□ 2.22
RAP1B-215	ENST00000535492	RHPN1	Q8TCX5	695 aa		28.92	■■■□□ 2.22
RAP1B-215	ENST00000535492	SERPINB13	Q9UIV8	391 aa		28.92	■■■□□ 2.22
RAP1B-215	ENST00000535492	MYH7	P12883	1935 aa		28.92	■■■□□ 2.22
RAP1B-215	ENST00000535492	APBB1	O00213	710 aa		28.91	■■■□□ 2.22
RAP1B-215	ENST00000535492	TATDN1	Q6P1N9	297 aa		28.9	■■■□□ 2.22
RAP1B-215	ENST00000535492	USP17L2	Q6R6M4	530 aa		28.9	■■■□□ 2.22
RAP1B-215	ENST00000535492	GPRC5A	Q8NFJ5	357 aa		28.9	■■■□□ 2.22
RAP1B-215	ENST00000535492	FEZ1	Q99689	392 aa		28.9	■■■□□ 2.22
RAP1B-215	ENST00000535492	CRISPLD2	Q9H0B8	497 aa		28.9	■■■□□ 2.22
RAP1B-215	ENST00000535492	EHD4	Q9H223	541 aa		28.9	■■■□□ 2.22
RAP1B-215	ENST00000535492	EMILIN3	Q9NT22	766 aa		28.9	■■■□□ 2.22
RAP1B-215	ENST00000535492	RANBP2	P49792	3224 aa	Known RBP	28.9	■■■□□ 2.22
RAP1B-215	ENST00000535492	BAZ2A	Q9UIF9	1905 aa	Known RBP	28.89	■■■□□ 2.22
RAP1B-215	ENST00000535492	MS4A1	P11836	297 aa		28.89	■■■□□ 2.22
RAP1B-215	ENST00000535492	TRIM32	Q13049	653 aa		28.89	■■■□□ 2.22
RAP1B-215	ENST00000535492	ZYX	Q15942	572 aa	Known RBP	28.89	■■■□□ 2.22
RAP1B-215	ENST00000535492	TMED8	Q6PL24	325 aa	Predicted RBP	28.89	■■■□□ 2.22
RAP1B-215	ENST00000535492	RIOK1	Q9BRS2	568 aa	Known RBP	28.89	■■■□□ 2.22
RAP1B-215	ENST00000535492	BCL11A	Q9H165	835 aa		28.89	■■■□□ 2.22
RAP1B-215	ENST00000535492	NR2E3	Q9Y5X4	410 aa		28.89	■■■□□ 2.22
RAP1B-215	ENST00000535492	CYP2B6	P20813	491 aa		28.88	■■■□□ 2.21
RAP1B-215	ENST00000535492	TTF1	Q15361	905 aa	Predicted RBP	28.88	■■■□□ 2.21
RAP1B-215	ENST00000535492	TTC6	Q86TZ1	520 aa		28.88	■■■□□ 2.21
RAP1B-215	ENST00000535492	TRIB2	Q92519	343 aa		28.88	■■■□□ 2.21
RAP1B-215	ENST00000535492	PAGR1	Q9BTK6	254 aa		28.88	■■■□□ 2.21
RAP1B-215	ENST00000535492	RBPJL	Q9UBG7	517 aa		28.88	■■■□□ 2.21
RAP1B-215	ENST00000535492	MAGEB6P1	A0A0J9YX57	407 aa		28.87	■■■□□ 2.21
RAP1B-215	ENST00000535492	CAPN2	P17655	700 aa		28.87	■■■□□ 2.21
RAP1B-215	ENST00000535492	RAB3GAP1	Q15042	981 aa		28.87	■■■□□ 2.21
RAP1B-215	ENST00000535492	CLASRP	Q8N2M8	674 aa	Known RBP	28.87	■■■□□ 2.21
RAP1B-215	ENST00000535492	PDE6A	P16499	860 aa		28.86	■■■□□ 2.21
RAP1B-215	ENST00000535492	ERVK-9	P63128	1117 aa		28.86	■■■□□ 2.21
RAP1B-215	ENST00000535492	ERVK-24	P63145	666 aa		28.86	■■■□□ 2.21
RAP1B-215	ENST00000535492	CERKL	Q49MI3	558 aa	Predicted RBP	28.86	■■■□□ 2.21
RAP1B-215	ENST00000535492	SOCS4	Q8WXH5	440 aa		28.86	■■■□□ 2.21
RAP1B-215	ENST00000535492	KIF1BP	Q96EK5	621 aa		28.86	■■■□□ 2.21
RAP1B-215	ENST00000535492	PAWR	Q96IZ0	340 aa	Known RBP	28.86	■■■□□ 2.21
RAP1B-215	ENST00000535492	DNAJC2	Q99543	621 aa	Known RBP	28.86	■■■□□ 2.21
RAP1B-215	ENST00000535492	NUDT12	Q9BQG2	462 aa		28.86	■■■□□ 2.21
RAP1B-215	ENST00000535492	HMX1	Q9NP08	348 aa	Predicted RBP	28.86	■■■□□ 2.21
RAP1B-215	ENST00000535492	RBM27	Q9P2N5	1060 aa	Known RBP	28.86	■■■□□ 2.21
RAP1B-215	ENST00000535492	COG6	Q9Y2V7	657 aa		28.86	■■■□□ 2.21
RAP1B-215	ENST00000535492	RPTOR	Q8N122	1335 aa		28.86	■■■□□ 2.21
RAP1B-215	ENST00000535492	PLCD1	P51178	756 aa		28.85	■■■□□ 2.21
RAP1B-215	ENST00000535492	ABCB5	Q2M3G0	1257 aa		28.85	■■■□□ 2.21
RAP1B-215	ENST00000535492	SLC9C2	Q5TAH2	1124 aa		28.85	■■■□□ 2.21
RAP1B-215	ENST00000535492	CCAR1	Q8IX12	1150 aa	Known RBP	28.85	■■■□□ 2.21
RAP1B-215	ENST00000535492	DIS3L	Q8TF46	1054 aa	Known RBP	28.85	■■■□□ 2.21
RAP1B-215	ENST00000535492	GTF3C2	Q8WUA4	911 aa	Predicted RBP	28.85	■■■□□ 2.21
RAP1B-215	ENST00000535492	PORCN	Q9H237	461 aa		28.85	■■■□□ 2.21
RAP1B-215	ENST00000535492	FRMPD3	Q5JV73	1810 aa		28.85	■■■□□ 2.21
RAP1B-215	ENST00000535492	GOLIM4	O00461	696 aa		28.84	■■■□□ 2.21
RAP1B-215	ENST00000535492	EVI5	O60447	810 aa		28.84	■■■□□ 2.21
RAP1B-215	ENST00000535492	HMMR	O75330	724 aa		28.84	■■■□□ 2.21

Retrieved 100 of 20,778 RNA–protein pairs in 106.8 ms