RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 RNF34Q969K3 372 aa8.64□□□□□ -1.03
PRKDC-205ENST00000535375 CCDC39Q9UFE4 941 aa8.64□□□□□ -1.03
PRKDC-205ENST00000535375 CORINQ9Y5Q5 1042 aa8.64□□□□□ -1.03
PRKDC-205ENST00000535375 IGF2BP3O00425 579 aaKnown RBP eCLIP8.63□□□□□ -1.03
PRKDC-205ENST00000535375 SCAMP3O14828 347 aaKnown RBP8.63□□□□□ -1.03
PRKDC-205ENST00000535375 PRNPP04156 253 aa8.63□□□□□ -1.03
PRKDC-205ENST00000535375 ITIH2P19823 946 aa8.63□□□□□ -1.03
PRKDC-205ENST00000535375 GARTP22102 1010 aa8.63□□□□□ -1.03
PRKDC-205ENST00000535375 VAMP1P23763 118 aa8.63□□□□□ -1.03
PRKDC-205ENST00000535375 MLECQ14165 292 aa8.63□□□□□ -1.03
PRKDC-205ENST00000535375 LDLRAD1Q5T700 205 aa8.63□□□□□ -1.03
PRKDC-205ENST00000535375 VSIG10LQ86VR7 867 aa8.63□□□□□ -1.03
PRKDC-205ENST00000535375 PLD6Q8N2A8 252 aaKnown RBP8.63□□□□□ -1.03
PRKDC-205ENST00000535375 FBXO27Q8NI29 283 aa8.63□□□□□ -1.03
PRKDC-205ENST00000535375 MRRFQ96E11 262 aaKnown RBP8.63□□□□□ -1.03
PRKDC-205ENST00000535375 HEXIM2Q96MH2 286 aaKnown RBP8.63□□□□□ -1.03
PRKDC-205ENST00000535375 DPH2Q9BQC3 489 aaPredicted RBP8.63□□□□□ -1.03
PRKDC-205ENST00000535375 TMEM265A0A087WTH1 108 aa8.62□□□□□ -1.03
PRKDC-205ENST00000535375 EOMESO95936 686 aa8.62□□□□□ -1.03
PRKDC-205ENST00000535375 CYP7A1P22680 504 aa8.62□□□□□ -1.03
PRKDC-205ENST00000535375 YARSP54577 528 aaKnown RBP8.62□□□□□ -1.03
PRKDC-205ENST00000535375 GP2P55259 537 aaKnown RBP8.62□□□□□ -1.03
PRKDC-205ENST00000535375 OXCT1P55809 520 aa8.62□□□□□ -1.03
PRKDC-205ENST00000535375 FANCCQ00597 558 aa8.62□□□□□ -1.03
PRKDC-205ENST00000535375 REC114Q7Z4M0 266 aa8.62□□□□□ -1.03
PRKDC-205ENST00000535375 USP48Q86UV5 1035 aa8.62□□□□□ -1.03
PRKDC-205ENST00000535375 STK11IPQ8N1F8 1099 aa8.62□□□□□ -1.03
PRKDC-205ENST00000535375 FAM13CQ8NE31 585 aa8.62□□□□□ -1.03
PRKDC-205ENST00000535375 FLCNQ8NFG4 579 aa8.62□□□□□ -1.03
PRKDC-205ENST00000535375 ACSF2Q96CM8 615 aaPredicted RBP8.62□□□□□ -1.03
PRKDC-205ENST00000535375 MISP3Q96FF7 219 aa8.62□□□□□ -1.03
PRKDC-205ENST00000535375 FBXL18Q96ME1 805 aa8.62□□□□□ -1.03
PRKDC-205ENST00000535375 KCNQ5Q9NR82 932 aa8.62□□□□□ -1.03
PRKDC-205ENST00000535375 ADAMTS1Q9UHI8 967 aa8.62□□□□□ -1.03
PRKDC-205ENST00000535375 MAPK8IP1Q9UQF2 711 aa8.62□□□□□ -1.03
PRKDC-205ENST00000535375 SLC5A6Q9Y289 635 aa8.62□□□□□ -1.03
PRKDC-205ENST00000535375 GREM1O60565 184 aa8.61□□□□□ -1.03
PRKDC-205ENST00000535375 CEACAM5P06731 702 aa8.61□□□□□ -1.03
PRKDC-205ENST00000535375 SFRP5Q5T4F7 317 aa8.61□□□□□ -1.03
PRKDC-205ENST00000535375 FAM214BQ7L5A3 538 aa8.61□□□□□ -1.03
PRKDC-205ENST00000535375 TP53INP2Q8IXH6 220 aa8.61□□□□□ -1.03
PRKDC-205ENST00000535375 SPON2Q9BUD6 331 aa8.61□□□□□ -1.03
PRKDC-205ENST00000535375 KRTAP4-8Q9BYQ9 185 aa8.61□□□□□ -1.03
PRKDC-205ENST00000535375 ADAMTS4O75173 837 aa8.6□□□□□ -1.03
PRKDC-205ENST00000535375 HTR3BO95264 441 aa8.6□□□□□ -1.03
PRKDC-205ENST00000535375 RECKO95980 971 aa8.6□□□□□ -1.03
PRKDC-205ENST00000535375 APOBRQ0VD83 1088 aa8.6□□□□□ -1.03
PRKDC-205ENST00000535375 TMEM201Q5SNT2 666 aa8.6□□□□□ -1.03
PRKDC-205ENST00000535375 CDH24Q86UP0 819 aa8.6□□□□□ -1.03
PRKDC-205ENST00000535375 KIAA0825Q8IV33 1275 aa8.6□□□□□ -1.03
PRKDC-205ENST00000535375 REV1Q9UBZ9 1251 aa8.6□□□□□ -1.03
PRKDC-205ENST00000535375 KLHL3Q9UH77 587 aa8.6□□□□□ -1.03
PRKDC-205ENST00000535375 POLR3KQ9Y2Y1 108 aaPredicted RBP8.6□□□□□ -1.03
PRKDC-205ENST00000535375 PRR36Q9H6K5 1346 aa8.59□□□□□ -1.03
PRKDC-205ENST00000535375 FAM155AB1AL88 458 aaPredicted RBP8.59□□□□□ -1.03
PRKDC-205ENST00000535375 MCM4P33991 863 aa8.59□□□□□ -1.03
PRKDC-205ENST00000535375 AOC3Q16853 763 aa8.59□□□□□ -1.03
PRKDC-205ENST00000535375 RIN3Q8TB24 985 aa8.59□□□□□ -1.03
PRKDC-205ENST00000535375 HRASLS5Q96KN8 279 aa8.59□□□□□ -1.03
PRKDC-205ENST00000535375 LRRC3Q9BY71 257 aa8.59□□□□□ -1.03
PRKDC-205ENST00000535375 BRMS1Q9HCU9 246 aa8.59□□□□□ -1.03
PRKDC-205ENST00000535375 UBP1Q9NZI7 540 aa8.59□□□□□ -1.03
PRKDC-205ENST00000535375 VAV3Q9UKW4 847 aa8.59□□□□□ -1.03
PRKDC-205ENST00000535375 PCDHB14Q9Y5E9 798 aa8.59□□□□□ -1.03
PRKDC-205ENST00000535375 U3KQE9 123 aa8.59□□□□□ -1.03
PRKDC-205ENST00000535375 UPK3BL1B0FP48 263 aa8.58□□□□□ -1.04
PRKDC-205ENST00000535375 UPK3BL2E5RIL1 263 aa8.58□□□□□ -1.04
PRKDC-205ENST00000535375 CBX7O95931 251 aa8.58□□□□□ -1.04
PRKDC-205ENST00000535375 ETV3P41162 512 aa8.58□□□□□ -1.04
PRKDC-205ENST00000535375 CHMP4BP1P59074 171 aa8.58□□□□□ -1.04
PRKDC-205ENST00000535375 PRKCQQ04759 706 aa8.58□□□□□ -1.04
PRKDC-205ENST00000535375 SEZ6Q53EL9 994 aa8.58□□□□□ -1.04
PRKDC-205ENST00000535375 BCL7CQ8WUZ0 217 aaPredicted RBP8.58□□□□□ -1.04
PRKDC-205ENST00000535375 NKD1Q969G9 470 aa8.58□□□□□ -1.04
PRKDC-205ENST00000535375 NT5C1AQ9BXI3 368 aa8.58□□□□□ -1.04
PRKDC-205ENST00000535375 SNX11Q9Y5W9 270 aa8.58□□□□□ -1.04
PRKDC-205ENST00000535375 TNNI2P48788 182 aa8.57□□□□□ -1.04
PRKDC-205ENST00000535375 ZNF394Q53GI3 561 aa8.57□□□□□ -1.04
PRKDC-205ENST00000535375 AGBL5Q8NDL9 886 aa8.57□□□□□ -1.04
PRKDC-205ENST00000535375 COX4I2Q96KJ9 171 aa8.57□□□□□ -1.04
PRKDC-205ENST00000535375 PLAGL2Q9UPG8 496 aa8.57□□□□□ -1.04
PRKDC-205ENST00000535375 CEP131Q9UPN4 1083 aa8.57□□□□□ -1.04
PRKDC-205ENST00000535375 OAS3Q9Y6K5 1087 aaKnown RBP8.57□□□□□ -1.04
PRKDC-205ENST00000535375 UNCXA6NJT0 531 aa8.56□□□□□ -1.04
PRKDC-205ENST00000535375 CRKP46108 304 aa8.56□□□□□ -1.04
PRKDC-205ENST00000535375 ZNF165P49910 485 aa8.56□□□□□ -1.04
PRKDC-205ENST00000535375 BNIP3Q12983 259 aa8.56□□□□□ -1.04
PRKDC-205ENST00000535375 PHACTR4Q8IZ21 702 aa8.56□□□□□ -1.04
PRKDC-205ENST00000535375 MFSD4AQ8N468 514 aa8.56□□□□□ -1.04
PRKDC-205ENST00000535375 CYB5D2Q8WUJ1 264 aa8.56□□□□□ -1.04
PRKDC-205ENST00000535375 KIAA1522Q9P206 1035 aaPredicted RBP8.56□□□□□ -1.04
PRKDC-205ENST00000535375 PCDHGB7Q9Y5F8 929 aa8.56□□□□□ -1.04
PRKDC-205ENST00000535375 CHURC1-FNTBB4DL54 471 aa8.55□□□□□ -1.04
PRKDC-205ENST00000535375 KIR3DL1P43629 444 aa8.55□□□□□ -1.04
PRKDC-205ENST00000535375 CDKAL1Q5VV42 579 aa8.55□□□□□ -1.04
PRKDC-205ENST00000535375 GK5Q6ZS86 529 aa8.55□□□□□ -1.04
PRKDC-205ENST00000535375 SLFN12Q8IYM2 578 aa8.55□□□□□ -1.04
PRKDC-205ENST00000535375 ZNF654Q8IZM8 581 aa8.55□□□□□ -1.04
PRKDC-205ENST00000535375 ASB11Q8WXH4 323 aa8.55□□□□□ -1.04
PRKDC-205ENST00000535375 CCDC74BQ96LY2 380 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms