RNA–Protein interactions for RNA: ENST00000535327.5

CCDC7-207, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-207ENST00000535327 ZSWIM9Q86XI8 627 aa9.85□□□□□ -0.83
CCDC7-207ENST00000535327 DPH2Q9BQC3 489 aaPredicted RBP9.85□□□□□ -0.83
CCDC7-207ENST00000535327 SNCAIPQ9Y6H5 919 aa9.85□□□□□ -0.83
CCDC7-207ENST00000535327 GFRA2O00451 464 aa9.84□□□□□ -0.83
CCDC7-207ENST00000535327 CBX7O95931 251 aa9.84□□□□□ -0.83
CCDC7-207ENST00000535327 ZNF865P0CJ78 1059 aaPredicted RBP9.84□□□□□ -0.83
CCDC7-207ENST00000535327 SFRP5Q5T4F7 317 aa9.84□□□□□ -0.83
CCDC7-207ENST00000535327 LETMD1Q6P1Q0 360 aa9.84□□□□□ -0.83
CCDC7-207ENST00000535327 HID1Q8IV36 788 aa9.84□□□□□ -0.83
CCDC7-207ENST00000535327 MFSD4AQ8N468 514 aa9.84□□□□□ -0.83
CCDC7-207ENST00000535327 LIN37Q96GY3 246 aaPredicted RBP9.84□□□□□ -0.83
CCDC7-207ENST00000535327 DUSP9Q99956 384 aaKnown RBP9.84□□□□□ -0.83
CCDC7-207ENST00000535327 C19orf73Q9NVV2 129 aa9.84□□□□□ -0.83
CCDC7-207ENST00000535327 ST14Q9Y5Y6 855 aa9.84□□□□□ -0.83
CCDC7-207ENST00000535327 CAPN6Q9Y6Q1 641 aa9.84□□□□□ -0.83
CCDC7-207ENST00000535327 PRPF40AO75400 957 aaKnown RBP9.83□□□□□ -0.84
CCDC7-207ENST00000535327 MESP2Q0VG99 397 aa9.83□□□□□ -0.84
CCDC7-207ENST00000535327 KCNMB1Q16558 191 aa9.83□□□□□ -0.84
CCDC7-207ENST00000535327 LCE1DQ5T752 114 aa9.83□□□□□ -0.84
CCDC7-207ENST00000535327 MEI1Q5TIA1 1274 aa9.83□□□□□ -0.84
CCDC7-207ENST00000535327 MFSD2AQ8NA29 543 aa9.83□□□□□ -0.84
CCDC7-207ENST00000535327 LRRC10BA6NIK2 292 aa9.82□□□□□ -0.84
CCDC7-207ENST00000535327 CAP2P40123 477 aa9.82□□□□□ -0.84
CCDC7-207ENST00000535327 AK5Q9Y6K8 562 aa9.82□□□□□ -0.84
CCDC7-207ENST00000535327 CST3P01034 146 aaPredicted RBP9.81□□□□□ -0.84
CCDC7-207ENST00000535327 LIG3P49916 1009 aa9.81□□□□□ -0.84
CCDC7-207ENST00000535327 MLANAQ16655 118 aa9.81□□□□□ -0.84
CCDC7-207ENST00000535327 CDH24Q86UP0 819 aa9.81□□□□□ -0.84
CCDC7-207ENST00000535327 FRMD6Q96NE9 622 aa9.81□□□□□ -0.84
CCDC7-207ENST00000535327 TJP2Q9UDY2 1190 aa9.81□□□□□ -0.84
CCDC7-207ENST00000535327 WASH4PA8MWX3 477 aa9.8□□□□□ -0.84
CCDC7-207ENST00000535327 AGMOQ6ZNB7 445 aa9.8□□□□□ -0.84
CCDC7-207ENST00000535327 C22orf34Q6ZV56 151 aa9.8□□□□□ -0.84
CCDC7-207ENST00000535327 KSR1Q8IVT5 923 aa9.8□□□□□ -0.84
CCDC7-207ENST00000535327 LMCD1Q9NZU5 365 aa9.8□□□□□ -0.84
CCDC7-207ENST00000535327 TLR6Q9Y2C9 796 aa9.8□□□□□ -0.84
CCDC7-207ENST00000535327 ANKRD33BA6NCL7 494 aa9.79□□□□□ -0.84
CCDC7-207ENST00000535327 TFE3P19532 575 aaPredicted RBP9.79□□□□□ -0.84
CCDC7-207ENST00000535327 RPS26P62854 115 aaKnown RBP9.79□□□□□ -0.84
CCDC7-207ENST00000535327 UBE2FQ969M7 185 aa9.79□□□□□ -0.84
CCDC7-207ENST00000535327 TRAIPQ9BWF2 469 aa9.79□□□□□ -0.84
CCDC7-207ENST00000535327 TNK2Q07912 1038 aa9.78□□□□□ -0.84
CCDC7-207ENST00000535327 ZSWIM5Q9P217 1185 aa9.78□□□□□ -0.84
CCDC7-207ENST00000535327 DBX1A6NMT0 343 aa9.77□□□□□ -0.85
CCDC7-207ENST00000535327 F6X3S4 739 aa9.77□□□□□ -0.85
CCDC7-207ENST00000535327 PGRP06401 933 aa9.77□□□□□ -0.85
CCDC7-207ENST00000535327 LMNB1P20700 586 aa9.77□□□□□ -0.85
CCDC7-207ENST00000535327 PRR23BQ6ZRT6 265 aa9.77□□□□□ -0.85
CCDC7-207ENST00000535327 JARID2Q92833 1246 aaPredicted RBP9.77□□□□□ -0.85
CCDC7-207ENST00000535327 AFMP43652 599 aa9.76□□□□□ -0.85
CCDC7-207ENST00000535327 EAPPQ56P03 285 aaPredicted RBP9.76□□□□□ -0.85
CCDC7-207ENST00000535327 NPAS4Q8IUM7 802 aa9.76□□□□□ -0.85
CCDC7-207ENST00000535327 FAM161BQ96MY7 647 aa9.76□□□□□ -0.85
CCDC7-207ENST00000535327 KRTAP4-7Q9BYR0 210 aa9.76□□□□□ -0.85
CCDC7-207ENST00000535327 PKN1Q16512 942 aa9.75□□□□□ -0.85
CCDC7-207ENST00000535327 LCE4AQ5TA78 99 aa9.75□□□□□ -0.85
CCDC7-207ENST00000535327 KIRREL1Q96J84 757 aa9.75□□□□□ -0.85
CCDC7-207ENST00000535327 TMEM87BQ96K49 555 aa9.75□□□□□ -0.85
CCDC7-207ENST00000535327 MIR1-1HGQ9H1L0 117 aa9.75□□□□□ -0.85
CCDC7-207ENST00000535327 KCNK12Q9HB15 430 aa9.75□□□□□ -0.85
CCDC7-207ENST00000535327 PARP2Q9UGN5 583 aa9.75□□□□□ -0.85
CCDC7-207ENST00000535327 CORINQ9Y5Q5 1042 aa9.75□□□□□ -0.85
CCDC7-207ENST00000535327 MRPL41Q8IXM3 137 aaKnown RBP9.74□□□□□ -0.85
CCDC7-207ENST00000535327 ACSF2Q96CM8 615 aaPredicted RBP9.74□□□□□ -0.85
CCDC7-207ENST00000535327 FAM84AQ96KN4 292 aa9.74□□□□□ -0.85
CCDC7-207ENST00000535327 Q96M66 194 aa9.74□□□□□ -0.85
CCDC7-207ENST00000535327 SLAMF8Q9P0V8 285 aa9.74□□□□□ -0.85
CCDC7-207ENST00000535327 UPK3BL1B0FP48 263 aa9.73□□□□□ -0.85
CCDC7-207ENST00000535327 UPK3BL2E5RIL1 263 aa9.73□□□□□ -0.85
CCDC7-207ENST00000535327 GLI1P08151 1106 aa9.73□□□□□ -0.85
CCDC7-207ENST00000535327 CTSHP09668 335 aa9.73□□□□□ -0.85
CCDC7-207ENST00000535327 RALGPS1Q5JS13 557 aa9.73□□□□□ -0.85
CCDC7-207ENST00000535327 SLC38A3Q99624 504 aa9.73□□□□□ -0.85
CCDC7-207ENST00000535327 DNAJC25-GNG10A0A024R161 153 aa9.72□□□□□ -0.85
CCDC7-207ENST00000535327 ESR1P03372 595 aa9.72□□□□□ -0.85
CCDC7-207ENST00000535327 GDNFP39905 211 aa9.72□□□□□ -0.85
CCDC7-207ENST00000535327 ERVFC1P60507 584 aa9.72□□□□□ -0.85
CCDC7-207ENST00000535327 ZNF746Q6NUN9 644 aaPredicted RBP9.72□□□□□ -0.85
CCDC7-207ENST00000535327 MPZL3Q6UWV2 235 aa9.72□□□□□ -0.85
CCDC7-207ENST00000535327 SPOCD1Q6ZMY3 1216 aa9.72□□□□□ -0.85
CCDC7-207ENST00000535327 THAP5Q7Z6K1 395 aa9.72□□□□□ -0.85
CCDC7-207ENST00000535327 CILP2Q8IUL8 1156 aa9.72□□□□□ -0.85
CCDC7-207ENST00000535327 DNAJB8Q8NHS0 232 aa9.72□□□□□ -0.85
CCDC7-207ENST00000535327 ALPK1Q96QP1 1244 aa9.72□□□□□ -0.85
CCDC7-207ENST00000535327 TSNAXIP1Q2TAA8 658 aa9.71□□□□□ -0.86
CCDC7-207ENST00000535327 TMEM67Q5HYA8 995 aa9.71□□□□□ -0.86
CCDC7-207ENST00000535327 BNC2Q6ZN30 1099 aaPredicted RBP9.71□□□□□ -0.86
CCDC7-207ENST00000535327 MCATQ8IVS2 390 aaKnown RBP9.71□□□□□ -0.86
CCDC7-207ENST00000535327 FAM53CQ9NYF3 392 aa9.71□□□□□ -0.86
CCDC7-207ENST00000535327 CYP7A1P22680 504 aa9.7□□□□□ -0.86
CCDC7-207ENST00000535327 KIR3DL1P43629 444 aa9.7□□□□□ -0.86
CCDC7-207ENST00000535327 RPL6Q02878 288 aaKnown RBP9.7□□□□□ -0.86
CCDC7-207ENST00000535327 SLC6A19Q695T7 634 aa9.7□□□□□ -0.86
CCDC7-207ENST00000535327 SND1Q7KZF4 910 aaKnown RBP eCLIP9.7□□□□□ -0.86
CCDC7-207ENST00000535327 PHC3Q8NDX5 983 aa9.7□□□□□ -0.86
CCDC7-207ENST00000535327 PPP1R13LQ8WUF5 828 aa9.7□□□□□ -0.86
CCDC7-207ENST00000535327 TACC3Q9Y6A5 838 aa9.7□□□□□ -0.86
CCDC7-207ENST00000535327 DAB2P98082 770 aa9.69□□□□□ -0.86
CCDC7-207ENST00000535327 TAGLNQ01995 201 aaKnown RBP9.69□□□□□ -0.86
CCDC7-207ENST00000535327 TTC6Q86TZ1 520 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms