RNA–Protein interactions for RNA: ENST00000534625.1

ATM-224, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5

Gene ATM, Length 725 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-224ENST00000534625 TTC39BQ5VTQ0 682 aaPredicted RBP7.21□□□□□ -1.26
ATM-224ENST00000534625 PHLDB3Q6NSJ2 640 aa7.21□□□□□ -1.26
ATM-224ENST00000534625 LTV1Q96GA3 475 aaPredicted RBP7.21□□□□□ -1.26
ATM-224ENST00000534625 RBSNQ9H1K0 784 aa7.21□□□□□ -1.26
ATM-224ENST00000534625 GGNBP2Q9H3C7 697 aa7.21□□□□□ -1.26
ATM-224ENST00000534625 ELP3Q9H9T3 547 aa7.21□□□□□ -1.26
ATM-224ENST00000534625 SPON1Q9HCB6 807 aa7.21□□□□□ -1.26
ATM-224ENST00000534625 CNTN3Q9P232 1028 aa7.21□□□□□ -1.26
ATM-224ENST00000534625 AMPHP49418 695 aa7.2□□□□□ -1.26
ATM-224ENST00000534625 PDE12Q6L8Q7 609 aaKnown RBP7.2□□□□□ -1.26
ATM-224ENST00000534625 CEP120Q8N960 986 aa7.2□□□□□ -1.26
ATM-224ENST00000534625 GTF3C2Q8WUA4 911 aaPredicted RBP7.2□□□□□ -1.26
ATM-224ENST00000534625 EDEM1Q92611 657 aa7.2□□□□□ -1.26
ATM-224ENST00000534625 RASSF4Q9H2L5 321 aa7.2□□□□□ -1.26
ATM-224ENST00000534625 PCMTD2Q9NV79 361 aa7.2□□□□□ -1.26
ATM-224ENST00000534625 CASZ1Q86V15 1759 aa7.19□□□□□ -1.26
ATM-224ENST00000534625 ALX3O95076 343 aa7.19□□□□□ -1.26
ATM-224ENST00000534625 PDGFAP04085 211 aa7.19□□□□□ -1.26
ATM-224ENST00000534625 MPSTP25325 297 aa7.19□□□□□ -1.26
ATM-224ENST00000534625 MTMR3Q13615 1198 aa7.19□□□□□ -1.26
ATM-224ENST00000534625 RRS1Q15050 365 aaKnown RBP7.19□□□□□ -1.26
ATM-224ENST00000534625 SLC15A2Q16348 729 aa7.19□□□□□ -1.26
ATM-224ENST00000534625 CEP135Q66GS9 1140 aa7.19□□□□□ -1.26
ATM-224ENST00000534625 XKR5Q6UX68 686 aa7.19□□□□□ -1.26
ATM-224ENST00000534625 GALNT11Q8NCW6 608 aa7.19□□□□□ -1.26
ATM-224ENST00000534625 DDX54Q8TDD1 881 aaKnown RBP7.19□□□□□ -1.26
ATM-224ENST00000534625 STK32BQ9NY57 414 aa7.19□□□□□ -1.26
ATM-224ENST00000534625 NHSQ6T4R5 1651 aa7.19□□□□□ -1.26
ATM-224ENST00000534625 A6NHS1 94 aa7.18□□□□□ -1.26
ATM-224ENST00000534625 F8W735 103 aaPredicted RBP7.18□□□□□ -1.26
ATM-224ENST00000534625 LINC01387J3KSC0 135 aa7.18□□□□□ -1.26
ATM-224ENST00000534625 PAX4O43316 350 aa7.18□□□□□ -1.26
ATM-224ENST00000534625 ZBTB7AO95365 584 aa7.18□□□□□ -1.26
ATM-224ENST00000534625 SSTR4P31391 388 aa7.18□□□□□ -1.26
ATM-224ENST00000534625 EIF1AXP47813 144 aaKnown RBP7.18□□□□□ -1.26
ATM-224ENST00000534625 NOM1Q5C9Z4 860 aaKnown RBP7.18□□□□□ -1.26
ATM-224ENST00000534625 NBPF6Q5VWK0 638 aa7.18□□□□□ -1.26
ATM-224ENST00000534625 PRR23CQ6ZRP0 262 aa7.18□□□□□ -1.26
ATM-224ENST00000534625 CACTIN-AS1Q8N1I8 211 aa7.18□□□□□ -1.26
ATM-224ENST00000534625 TMEM130Q8N3G9 435 aa7.18□□□□□ -1.26
ATM-224ENST00000534625 NBPF4Q96M43 638 aa7.18□□□□□ -1.26
ATM-224ENST00000534625 LACRTQ9GZZ8 138 aa7.18□□□□□ -1.26
ATM-224ENST00000534625 SRA1Q9HD15 236 aaKnown RBP7.18□□□□□ -1.26
ATM-224ENST00000534625 KANSL3Q9P2N6 904 aa7.18□□□□□ -1.26
ATM-224ENST00000534625 PPP1R1BQ9UD71 204 aaPredicted RBP7.18□□□□□ -1.26
ATM-224ENST00000534625 SALL4Q9UJQ4 1053 aa7.18□□□□□ -1.26
ATM-224ENST00000534625 TIMELESSQ9UNS1 1208 aa7.18□□□□□ -1.26
ATM-224ENST00000534625 PPME1Q9Y570 386 aa7.18□□□□□ -1.26
ATM-224ENST00000534625 RGPD2P0DJD1 1756 aa7.18□□□□□ -1.26
ATM-224ENST00000534625 BTAF1O14981 1849 aa7.17□□□□□ -1.26
ATM-224ENST00000534625 ACPPP15309 386 aa7.17□□□□□ -1.26
ATM-224ENST00000534625 NPR3P17342 541 aa7.17□□□□□ -1.26
ATM-224ENST00000534625 TXKP42681 527 aa7.17□□□□□ -1.26
ATM-224ENST00000534625 DNM1Q05193 864 aaKnown RBP7.17□□□□□ -1.26
ATM-224ENST00000534625 ZNF827Q17R98 1081 aa7.17□□□□□ -1.26
ATM-224ENST00000534625 TXNDC11Q6PKC3 985 aa7.17□□□□□ -1.26
ATM-224ENST00000534625 ZNF438Q7Z4V0 828 aa7.17□□□□□ -1.26
ATM-224ENST00000534625 MAP4K3Q8IVH8 894 aa7.17□□□□□ -1.26
ATM-224ENST00000534625 DZIP1LQ8IYY4 767 aaKnown RBP7.17□□□□□ -1.26
ATM-224ENST00000534625 C1orf127Q8N9H9 656 aa7.17□□□□□ -1.26
ATM-224ENST00000534625 ZCRB1Q8TBF4 217 aaKnown RBP7.17□□□□□ -1.26
ATM-224ENST00000534625 SPACA7Q96KW9 195 aa7.17□□□□□ -1.26
ATM-224ENST00000534625 POP1Q99575 1024 aaKnown RBP7.17□□□□□ -1.26
ATM-224ENST00000534625 PBX4Q9BYU1 374 aa7.17□□□□□ -1.26
ATM-224ENST00000534625 MRPL18Q9H0U6 180 aaKnown RBP7.17□□□□□ -1.26
ATM-224ENST00000534625 RTL1A6NKG5 1358 aa7.17□□□□□ -1.26
ATM-224ENST00000534625 MEGF6O75095 1541 aa7.17□□□□□ -1.26
ATM-224ENST00000534625 FAM208AQ9UK61 1670 aaKnown RBP7.16□□□□□ -1.26
ATM-224ENST00000534625 NFKBIEO00221 500 aa7.16□□□□□ -1.26
ATM-224ENST00000534625 MZF1P28698 734 aaPredicted RBP7.16□□□□□ -1.26
ATM-224ENST00000534625 HSP90AB2PQ58FF8 381 aa7.16□□□□□ -1.26
ATM-224ENST00000534625 Q6ZS46 218 aa7.16□□□□□ -1.26
ATM-224ENST00000534625 USHBP1Q8N6Y0 703 aa7.16□□□□□ -1.26
ATM-224ENST00000534625 PCGF6Q9BYE7 350 aa7.16□□□□□ -1.26
ATM-224ENST00000534625 MTFR1LQ9H019 292 aa7.16□□□□□ -1.26
ATM-224ENST00000534625 CHRDQ9H2X0 955 aa7.16□□□□□ -1.26
ATM-224ENST00000534625 AKTIPQ9H8T0 292 aa7.16□□□□□ -1.26
ATM-224ENST00000534625 KCNK4Q9NYG8 393 aa7.16□□□□□ -1.26
ATM-224ENST00000534625 CLSPNQ9HAW4 1339 aa7.16□□□□□ -1.26
ATM-224ENST00000534625 COBLO75128 1261 aa7.15□□□□□ -1.26
ATM-224ENST00000534625 SMNDC1O75940 238 aaKnown RBP eCLIP7.15□□□□□ -1.26
ATM-224ENST00000534625 WISP1O95388 367 aa7.15□□□□□ -1.26
ATM-224ENST00000534625 CDC27P30260 824 aa7.15□□□□□ -1.26
ATM-224ENST00000534625 AGGF1Q8N302 714 aaeCLIP7.15□□□□□ -1.26
ATM-224ENST00000534625 FMNL2Q96PY5 1086 aa7.15□□□□□ -1.26
ATM-224ENST00000534625 MUC3BQ9H195 1237 aa7.15□□□□□ -1.26
ATM-224ENST00000534625 SH2B1Q9NRF2 756 aaPredicted RBP7.15□□□□□ -1.26
ATM-224ENST00000534625 NSD2O96028 1365 aa7.15□□□□□ -1.26
ATM-224ENST00000534625 INSRP06213 1382 aa7.15□□□□□ -1.26
ATM-224ENST00000534625 PAPPAQ13219 1627 aa7.15□□□□□ -1.27
ATM-224ENST00000534625 UTRNP46939 3433 aa7.15□□□□□ -1.27
ATM-224ENST00000534625 SHANK3Q9BYB0 1731 aa7.15□□□□□ -1.27
ATM-224ENST00000534625 RPLP1P05386 114 aaKnown RBP7.14□□□□□ -1.27
ATM-224ENST00000534625 FSTP19883 344 aa7.14□□□□□ -1.27
ATM-224ENST00000534625 EPHA1P21709 976 aa7.14□□□□□ -1.27
ATM-224ENST00000534625 FLT4P35916 1363 aa7.14□□□□□ -1.27
ATM-224ENST00000534625 CGNL1Q0VF96 1302 aa7.14□□□□□ -1.27
ATM-224ENST00000534625 KIF24Q5T7B8 1368 aa7.14□□□□□ -1.27
ATM-224ENST00000534625 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.14□□□□□ -1.27
ATM-224ENST00000534625 NCAPG2Q86XI2 1143 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms