RNA–Protein interactions for RNA: ENST00000534189.1

CCDC180-213, Transcript of coiled-coil domain containing 180, humanhuman

TSL 3

Gene CCDC180, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC180-213ENST00000534189 SRRDQ9UH36 339 aa19.7■□□□□ 0.74
CCDC180-213ENST00000534189 SAP30BPQ9UHR5 308 aaKnown RBP19.7■□□□□ 0.74
CCDC180-213ENST00000534189 SMARCA5O60264 1052 aaPredicted RBP19.69■□□□□ 0.74
CCDC180-213ENST00000534189 CCL5P13501 91 aa19.69■□□□□ 0.74
CCDC180-213ENST00000534189 C17orf99Q6UX52 265 aa19.69■□□□□ 0.74
CCDC180-213ENST00000534189 DEFB123Q8N688 67 aa19.69■□□□□ 0.74
CCDC180-213ENST00000534189 HAUS7Q99871 368 aa19.69■□□□□ 0.74
CCDC180-213ENST00000534189 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.69■□□□□ 0.74
CCDC180-213ENST00000534189 AS3MTQ9HBK9 375 aa19.69■□□□□ 0.74
CCDC180-213ENST00000534189 GINM1Q9NU53 330 aa19.69■□□□□ 0.74
CCDC180-213ENST00000534189 DOCK1Q14185 1865 aa19.69■□□□□ 0.74
CCDC180-213ENST00000534189 USP17L5A8MUK1 530 aa19.68■□□□□ 0.74
CCDC180-213ENST00000534189 ASNSP08243 561 aa19.68■□□□□ 0.74
CCDC180-213ENST00000534189 GRK4P32298 578 aa19.68■□□□□ 0.74
CCDC180-213ENST00000534189 SPP2Q13103 211 aa19.68■□□□□ 0.74
CCDC180-213ENST00000534189 TTC6Q86TZ1 520 aa19.68■□□□□ 0.74
CCDC180-213ENST00000534189 CCDC84Q86UT8 332 aaPredicted RBP19.68■□□□□ 0.74
CCDC180-213ENST00000534189 ZNF280CQ8ND82 737 aa19.68■□□□□ 0.74
CCDC180-213ENST00000534189 RIOK1Q9BRS2 568 aaKnown RBP19.68■□□□□ 0.74
CCDC180-213ENST00000534189 CRNKL1Q9BZJ0 848 aaKnown RBP19.68■□□□□ 0.74
CCDC180-213ENST00000534189 CPA4Q9UI42 421 aa19.68■□□□□ 0.74
CCDC180-213ENST00000534189 SLC45A1Q9Y2W3 748 aa19.68■□□□□ 0.74
CCDC180-213ENST00000534189 ZNF532Q9HCE3 1301 aa19.68■□□□□ 0.74
CCDC180-213ENST00000534189 SPTBN5Q9NRC6 3674 aaKnown RBP19.67■□□□□ 0.74
CCDC180-213ENST00000534189 BMP8BP34820 402 aa19.67■□□□□ 0.74
CCDC180-213ENST00000534189 RRP1BQ14684 758 aaKnown RBP19.67■□□□□ 0.74
CCDC180-213ENST00000534189 EDC3Q96F86 508 aaKnown RBP19.67■□□□□ 0.74
CCDC180-213ENST00000534189 GPATCH3Q96I76 525 aa19.67■□□□□ 0.74
CCDC180-213ENST00000534189 RNF208Q9H0X6 261 aa19.67■□□□□ 0.74
CCDC180-213ENST00000534189 ECHDC1Q9NTX5 307 aa19.67■□□□□ 0.74
CCDC180-213ENST00000534189 MTMR10Q9NXD2 777 aa19.67■□□□□ 0.74
CCDC180-213ENST00000534189 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.67■□□□□ 0.74
CCDC180-213ENST00000534189 EVI5O60447 810 aa19.66■□□□□ 0.74
CCDC180-213ENST00000534189 FARP2O94887 1054 aaPredicted RBP19.66■□□□□ 0.74
CCDC180-213ENST00000534189 Q7L0L9 218 aa19.66■□□□□ 0.74
CCDC180-213ENST00000534189 U2AF1L4Q8WU68 220 aaKnown RBP19.66■□□□□ 0.74
CCDC180-213ENST00000534189 TRIM47Q96LD4 638 aa19.66■□□□□ 0.74
CCDC180-213ENST00000534189 GDF15Q99988 308 aa19.66■□□□□ 0.74
CCDC180-213ENST00000534189 PCDHB15Q9Y5E8 787 aa19.66■□□□□ 0.74
CCDC180-213ENST00000534189 FOCADQ5VW36 1801 aa19.66■□□□□ 0.74
CCDC180-213ENST00000534189 CDK5RAP2Q96SN8 1893 aa19.65■□□□□ 0.74
CCDC180-213ENST00000534189 TCRBV5S4A2TA0A5A2 114 aa19.65■□□□□ 0.74
CCDC180-213ENST00000534189 POLR3DP05423 398 aaPredicted RBP19.65■□□□□ 0.74
CCDC180-213ENST00000534189 CYP2C8P10632 490 aa19.65■□□□□ 0.74
CCDC180-213ENST00000534189 ZSCAN25Q6NSZ9 544 aa19.65■□□□□ 0.74
CCDC180-213ENST00000534189 PROCA1Q8NCQ7 364 aaPredicted RBP19.65■□□□□ 0.74
CCDC180-213ENST00000534189 WDR18Q9BV38 432 aa19.65■□□□□ 0.74
CCDC180-213ENST00000534189 EHD4Q9H223 541 aa19.65■□□□□ 0.74
CCDC180-213ENST00000534189 DNAJC18Q9H819 358 aa19.65■□□□□ 0.74
CCDC180-213ENST00000534189 SERPINB13Q9UIV8 391 aa19.65■□□□□ 0.74
CCDC180-213ENST00000534189 AGTPBP1Q9UPW5 1226 aa19.65■□□□□ 0.74
CCDC180-213ENST00000534189 SGPL1O95470 568 aa19.64■□□□□ 0.73
CCDC180-213ENST00000534189 OSBPP22059 807 aa19.64■□□□□ 0.73
CCDC180-213ENST00000534189 HOXD10P28358 340 aa19.64■□□□□ 0.73
CCDC180-213ENST00000534189 ADD2P35612 726 aa19.64■□□□□ 0.73
CCDC180-213ENST00000534189 PSMC4P43686 418 aa19.64■□□□□ 0.73
CCDC180-213ENST00000534189 PABPC4Q13310 644 aaKnown RBP eCLIP19.64■□□□□ 0.73
CCDC180-213ENST00000534189 PNMA3Q9UL41 463 aa19.64■□□□□ 0.73
CCDC180-213ENST00000534189 ADGRA2Q96PE1 1338 aa19.64■□□□□ 0.73
CCDC180-213ENST00000534189 BCRP11274 1271 aa19.63■□□□□ 0.73
CCDC180-213ENST00000534189 LRIT3Q3SXY7 679 aa19.63■□□□□ 0.73
CCDC180-213ENST00000534189 RAET1EQ8TD07 263 aa19.63■□□□□ 0.73
CCDC180-213ENST00000534189 SMCR8Q8TEV9 937 aaPredicted RBP19.63■□□□□ 0.73
CCDC180-213ENST00000534189 CRBNQ96SW2 442 aa19.63■□□□□ 0.73
CCDC180-213ENST00000534189 PHIPQ8WWQ0 1821 aa19.62■□□□□ 0.73
CCDC180-213ENST00000534189 GDF11O95390 407 aa19.62■□□□□ 0.73
CCDC180-213ENST00000534189 FMNL1O95466 1100 aaPredicted RBP19.62■□□□□ 0.73
CCDC180-213ENST00000534189 CAPN2P17655 700 aa19.62■□□□□ 0.73
CCDC180-213ENST00000534189 HMGCS2P54868 508 aa19.62■□□□□ 0.73
CCDC180-213ENST00000534189 UBXN2AP68543 259 aa19.62■□□□□ 0.73
CCDC180-213ENST00000534189 UBE3CQ15386 1083 aa19.62■□□□□ 0.73
CCDC180-213ENST00000534189 SH3D19Q5HYK7 790 aa19.62■□□□□ 0.73
CCDC180-213ENST00000534189 TATDN1Q6P1N9 297 aa19.62■□□□□ 0.73
CCDC180-213ENST00000534189 MCM9Q9NXL9 1143 aa19.62■□□□□ 0.73
CCDC180-213ENST00000534189 TMOD4Q9NZQ9 345 aa19.62■□□□□ 0.73
CCDC180-213ENST00000534189 ZBTB47Q9UFB7 747 aaPredicted RBP19.62■□□□□ 0.73
CCDC180-213ENST00000534189 ZBTB21Q9ULJ3 1066 aa19.62■□□□□ 0.73
CCDC180-213ENST00000534189 MYH1P12882 1939 aa19.62■□□□□ 0.73
CCDC180-213ENST00000534189 SIPA1L1O43166 1804 aa19.62■□□□□ 0.73
CCDC180-213ENST00000534189 ATAD5Q96QE3 1844 aa19.61■□□□□ 0.73
CCDC180-213ENST00000534189 C19orf81C9J6K1 198 aa19.61■□□□□ 0.73
CCDC180-213ENST00000534189 BACE1P56817 501 aa19.61■□□□□ 0.73
CCDC180-213ENST00000534189 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.61■□□□□ 0.73
CCDC180-213ENST00000534189 LCORLQ8N3X6 602 aa19.61■□□□□ 0.73
CCDC180-213ENST00000534189 ARMT1Q9H993 441 aa19.61■□□□□ 0.73
CCDC180-213ENST00000534189 MYPNQ86TC9 1320 aa19.6■□□□□ 0.73
CCDC180-213ENST00000534189 USP17L10C9JJH3 530 aa19.6■□□□□ 0.73
CCDC180-213ENST00000534189 ECM2O94769 699 aaPredicted RBP19.6■□□□□ 0.73
CCDC180-213ENST00000534189 MBD4O95243 580 aa19.6■□□□□ 0.73
CCDC180-213ENST00000534189 PLCD1P51178 756 aa19.6■□□□□ 0.73
CCDC180-213ENST00000534189 JAG1P78504 1218 aa19.6■□□□□ 0.73
CCDC180-213ENST00000534189 CERKLQ49MI3 558 aaPredicted RBP19.6■□□□□ 0.73
CCDC180-213ENST00000534189 TREML2Q5T2D2 321 aa19.6■□□□□ 0.73
CCDC180-213ENST00000534189 SDR42E1Q8WUS8 393 aa19.6■□□□□ 0.73
CCDC180-213ENST00000534189 UNC93B1Q9H1C4 597 aa19.6■□□□□ 0.73
CCDC180-213ENST00000534189 CABP5Q9NP86 173 aa19.6■□□□□ 0.73
CCDC180-213ENST00000534189 DCP1AQ9NPI6 582 aaPredicted RBP19.6■□□□□ 0.73
CCDC180-213ENST00000534189 ATP8A2Q9NTI2 1148 aa19.6■□□□□ 0.73
CCDC180-213ENST00000534189 PTPRFP10586 1907 aa19.6■□□□□ 0.73
CCDC180-213ENST00000534189 GH2P01242 217 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms