RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 KCTD2Q14681 263 aa12.69□□□□□ -0.38
AMBRA1-211ENST00000533727 ENOX2Q16206 610 aaKnown RBP12.69□□□□□ -0.38
AMBRA1-211ENST00000533727 CHST3Q7LGC8 479 aa12.69□□□□□ -0.38
AMBRA1-211ENST00000533727 NUP88Q99567 741 aaPredicted RBP12.69□□□□□ -0.38
AMBRA1-211ENST00000533727 QRICH2Q9H0J4 1663 aa12.69□□□□□ -0.38
AMBRA1-211ENST00000533727 H7C1W4 665 aa12.69□□□□□ -0.38
AMBRA1-211ENST00000533727 MCM3P25205 808 aa12.69□□□□□ -0.38
AMBRA1-211ENST00000533727 MCM7P33993 719 aa12.69□□□□□ -0.38
AMBRA1-211ENST00000533727 GSDMDP57764 484 aa12.69□□□□□ -0.38
AMBRA1-211ENST00000533727 SV2BQ7L1I2 683 aa12.69□□□□□ -0.38
AMBRA1-211ENST00000533727 KIFC2Q96AC6 838 aa12.69□□□□□ -0.38
AMBRA1-211ENST00000533727 PANK2Q9BZ23 570 aa12.69□□□□□ -0.38
AMBRA1-211ENST00000533727 TAF12Q16514 161 aa12.69□□□□□ -0.38
AMBRA1-211ENST00000533727 MICALCLQ6ZW33 695 aa12.69□□□□□ -0.38
AMBRA1-211ENST00000533727 FOXP4Q8IVH2 680 aaPredicted RBP12.69□□□□□ -0.38
AMBRA1-211ENST00000533727 USP26Q9BXU7 913 aa12.69□□□□□ -0.38
AMBRA1-211ENST00000533727 ABT1Q9ULW3 272 aaKnown RBP12.69□□□□□ -0.38
AMBRA1-211ENST00000533727 V9GY48 417 aaPredicted RBP12.69□□□□□ -0.38
AMBRA1-211ENST00000533727 DDAH1O94760 285 aa12.68□□□□□ -0.38
AMBRA1-211ENST00000533727 GTF2A1P52655 376 aaPredicted RBP12.68□□□□□ -0.38
AMBRA1-211ENST00000533727 SKAP1Q86WV1 359 aa12.68□□□□□ -0.38
AMBRA1-211ENST00000533727 APOBEC3FQ8IUX4 373 aaKnown RBP12.68□□□□□ -0.38
AMBRA1-211ENST00000533727 EAF2Q96CJ1 260 aaPredicted RBP12.68□□□□□ -0.38
AMBRA1-211ENST00000533727 SPAG5Q96R06 1193 aa12.68□□□□□ -0.38
AMBRA1-211ENST00000533727 PLVAPQ9BX97 442 aa12.68□□□□□ -0.38
AMBRA1-211ENST00000533727 PUF60Q9UHX1 559 aaKnown RBP12.68□□□□□ -0.38
AMBRA1-211ENST00000533727 ARHGEF35A5YM69 484 aa12.68□□□□□ -0.38
AMBRA1-211ENST00000533727 C21orf2O43822 256 aa12.68□□□□□ -0.38
AMBRA1-211ENST00000533727 TTC12Q9H892 705 aaPredicted RBP12.68□□□□□ -0.38
AMBRA1-211ENST00000533727 KANSL2Q9H9L4 492 aa12.68□□□□□ -0.38
AMBRA1-211ENST00000533727 PAXBP1Q9Y5B6 917 aa12.68□□□□□ -0.38
AMBRA1-211ENST00000533727 FOSP01100 380 aaPredicted RBP12.68□□□□□ -0.38
AMBRA1-211ENST00000533727 CCT6AP40227 531 aaKnown RBP12.68□□□□□ -0.38
AMBRA1-211ENST00000533727 PHKA1P46020 1223 aa12.68□□□□□ -0.38
AMBRA1-211ENST00000533727 KCNQ4P56696 695 aa12.68□□□□□ -0.38
AMBRA1-211ENST00000533727 SP4Q02446 784 aa12.68□□□□□ -0.38
AMBRA1-211ENST00000533727 UVSSAQ2YD98 709 aa12.68□□□□□ -0.38
AMBRA1-211ENST00000533727 KRT26Q7Z3Y9 468 aa12.68□□□□□ -0.38
AMBRA1-211ENST00000533727 REXO1Q8N1G1 1221 aaKnown RBP12.68□□□□□ -0.38
AMBRA1-211ENST00000533727 MYO3AQ8NEV4 1616 aa12.68□□□□□ -0.38
AMBRA1-211ENST00000533727 RAD17O75943 681 aa12.68□□□□□ -0.38
AMBRA1-211ENST00000533727 ADCY5O95622 1261 aa12.68□□□□□ -0.38
AMBRA1-211ENST00000533727 CFBP00751 764 aa12.68□□□□□ -0.38
AMBRA1-211ENST00000533727 CTDSPL2Q05D32 466 aa12.68□□□□□ -0.38
AMBRA1-211ENST00000533727 SEPT7Q16181 437 aaKnown RBP12.68□□□□□ -0.38
AMBRA1-211ENST00000533727 SLFN13Q68D06 897 aa12.68□□□□□ -0.38
AMBRA1-211ENST00000533727 FER1L4A9Z1Z3 1794 aa12.67□□□□□ -0.38
AMBRA1-211ENST00000533727 ARID4AP29374 1257 aaPredicted RBP12.67□□□□□ -0.38
AMBRA1-211ENST00000533727 STRN3Q13033 797 aa12.67□□□□□ -0.38
AMBRA1-211ENST00000533727 KIF4BQ2VIQ3 1234 aa12.67□□□□□ -0.38
AMBRA1-211ENST00000533727 FAM227BQ96M60 508 aa12.67□□□□□ -0.38
AMBRA1-211ENST00000533727 ZSCAN10Q96SZ4 725 aaPredicted RBP12.67□□□□□ -0.38
AMBRA1-211ENST00000533727 SYNCQ9H7C4 482 aa12.67□□□□□ -0.38
AMBRA1-211ENST00000533727 PI4KBQ9UBF8 816 aa12.67□□□□□ -0.38
AMBRA1-211ENST00000533727 ZBTB21Q9ULJ3 1066 aa12.67□□□□□ -0.38
AMBRA1-211ENST00000533727 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.67□□□□□ -0.38
AMBRA1-211ENST00000533727 CD163L1Q9NR16 1453 aa12.67□□□□□ -0.38
AMBRA1-211ENST00000533727 LMAN1P49257 510 aa12.67□□□□□ -0.38
AMBRA1-211ENST00000533727 ANKRD35Q8N283 1001 aa12.67□□□□□ -0.38
AMBRA1-211ENST00000533727 SLC10A4Q96EP9 437 aa12.67□□□□□ -0.38
AMBRA1-211ENST00000533727 ADD3Q9UEY8 706 aaKnown RBP12.67□□□□□ -0.38
AMBRA1-211ENST00000533727 PREX1Q8TCU6 1659 aa12.67□□□□□ -0.38
AMBRA1-211ENST00000533727 GCOM1H8Y6P7 765 aaPredicted RBP12.67□□□□□ -0.38
AMBRA1-211ENST00000533727 KIF5CO60282 957 aa12.67□□□□□ -0.38
AMBRA1-211ENST00000533727 FLOT1O75955 427 aa12.67□□□□□ -0.38
AMBRA1-211ENST00000533727 POLR2MP0CAP2 368 aa12.67□□□□□ -0.38
AMBRA1-211ENST00000533727 MNAT1P51948 309 aa12.67□□□□□ -0.38
AMBRA1-211ENST00000533727 OTUD6AQ7L8S5 288 aa12.67□□□□□ -0.38
AMBRA1-211ENST00000533727 TTLL11Q8NHH1 800 aa12.67□□□□□ -0.38
AMBRA1-211ENST00000533727 KDM2BQ8NHM5 1336 aa12.67□□□□□ -0.38
AMBRA1-211ENST00000533727 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.67□□□□□ -0.38
AMBRA1-211ENST00000533727 SEC31BQ9NQW1 1179 aa12.67□□□□□ -0.38
AMBRA1-211ENST00000533727 CEP83Q9Y592 693 aa12.67□□□□□ -0.38
AMBRA1-211ENST00000533727 CPDO75976 1380 aa12.67□□□□□ -0.38
AMBRA1-211ENST00000533727 ASPRV1Q53RT3 343 aa12.67□□□□□ -0.38
AMBRA1-211ENST00000533727 FBXO11Q86XK2 927 aa12.67□□□□□ -0.38
AMBRA1-211ENST00000533727 SP8Q8IXZ3 490 aa12.67□□□□□ -0.38
AMBRA1-211ENST00000533727 RNF181Q9P0P0 153 aa12.67□□□□□ -0.38
AMBRA1-211ENST00000533727 RABGAP1Q9Y3P9 1069 aa12.67□□□□□ -0.38
AMBRA1-211ENST00000533727 CASQ1P31415 396 aa12.66□□□□□ -0.38
AMBRA1-211ENST00000533727 TRIM28Q13263 835 aaKnown RBP12.66□□□□□ -0.38
AMBRA1-211ENST00000533727 ALS2CR12Q96Q35 445 aa12.66□□□□□ -0.38
AMBRA1-211ENST00000533727 SERPINB13Q9UIV8 391 aa12.66□□□□□ -0.38
AMBRA1-211ENST00000533727 N4BP3O15049 544 aa12.66□□□□□ -0.38
AMBRA1-211ENST00000533727 AFMP43652 599 aa12.66□□□□□ -0.38
AMBRA1-211ENST00000533727 FBXO41Q8TF61 875 aa12.66□□□□□ -0.38
AMBRA1-211ENST00000533727 TRMT1Q9NXH9 659 aaKnown RBP12.66□□□□□ -0.38
AMBRA1-211ENST00000533727 ARHGEF16Q5VV41 709 aa12.66□□□□□ -0.38
AMBRA1-211ENST00000533727 CCDC117Q8IWD4 279 aaPredicted RBP12.66□□□□□ -0.38
AMBRA1-211ENST00000533727 ZNF710Q8N1W2 664 aa12.66□□□□□ -0.38
AMBRA1-211ENST00000533727 GOLGA6L9A6NEM1 432 aa12.65□□□□□ -0.38
AMBRA1-211ENST00000533727 H0YCG3 227 aa12.65□□□□□ -0.38
AMBRA1-211ENST00000533727 POTEB2H3BUK9 544 aa12.65□□□□□ -0.38
AMBRA1-211ENST00000533727 hCG_1984214I3L0E3 225 aa12.65□□□□□ -0.38
AMBRA1-211ENST00000533727 ZEB2O60315 1214 aa12.65□□□□□ -0.38
AMBRA1-211ENST00000533727 CTNNA2P26232 953 aa12.65□□□□□ -0.38
AMBRA1-211ENST00000533727 ZNF654Q8IZM8 581 aa12.65□□□□□ -0.38
AMBRA1-211ENST00000533727 ZNF713Q8N859 430 aaPredicted RBP12.65□□□□□ -0.38
AMBRA1-211ENST00000533727 DHX58Q96C10 678 aa12.65□□□□□ -0.38
AMBRA1-211ENST00000533727 CRAMP1Q96RY5 1269 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms