RNA–Protein interactions for RNA: ENST00000533572.5

CTSB-229, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-229ENST00000533572 FASTKD5Q7L8L6 764 aaKnown RBP20.56■□□□□ 0.88
CTSB-229ENST00000533572 ANKRD23Q86SG2 305 aa20.56■□□□□ 0.88
CTSB-229ENST00000533572 ERO1AQ96HE7 468 aa20.56■□□□□ 0.88
CTSB-229ENST00000533572 ARMT1Q9H993 441 aa20.56■□□□□ 0.88
CTSB-229ENST00000533572 AS3MTQ9HBK9 375 aa20.56■□□□□ 0.88
CTSB-229ENST00000533572 MCM9Q9NXL9 1143 aa20.56■□□□□ 0.88
CTSB-229ENST00000533572 A0A0D9SFI3 127 aa20.55■□□□□ 0.88
CTSB-229ENST00000533572 TRIM75PA6NK02 468 aa20.55■□□□□ 0.88
CTSB-229ENST00000533572 ASNSP08243 561 aa20.55■□□□□ 0.88
CTSB-229ENST00000533572 GADL1Q6ZQY3 521 aa20.55■□□□□ 0.88
CTSB-229ENST00000533572 AMOTL1Q8IY63 956 aa20.55■□□□□ 0.88
CTSB-229ENST00000533572 FAM227BQ96M60 508 aa20.55■□□□□ 0.88
CTSB-229ENST00000533572 STRBPQ96SI9 672 aaKnown RBP20.55■□□□□ 0.88
CTSB-229ENST00000533572 ATP8A2Q9NTI2 1148 aa20.55■□□□□ 0.88
CTSB-229ENST00000533572 SERPINB13Q9UIV8 391 aa20.55■□□□□ 0.88
CTSB-229ENST00000533572 AFG3L2Q9Y4W6 797 aa20.55■□□□□ 0.88
CTSB-229ENST00000533572 NAV1Q8NEY1 1877 aa20.54■□□□□ 0.88
CTSB-229ENST00000533572 USP17L5A8MUK1 530 aa20.54■□□□□ 0.88
CTSB-229ENST00000533572 PDHXO00330 501 aa20.54■□□□□ 0.88
CTSB-229ENST00000533572 GIMAP6Q6P9H5 292 aa20.54■□□□□ 0.88
CTSB-229ENST00000533572 CCDC84Q86UT8 332 aaPredicted RBP20.54■□□□□ 0.88
CTSB-229ENST00000533572 METTL16Q86W50 562 aaKnown RBP20.54■□□□□ 0.88
CTSB-229ENST00000533572 SDR42E1Q8WUS8 393 aa20.54■□□□□ 0.88
CTSB-229ENST00000533572 EHD4Q9H223 541 aa20.54■□□□□ 0.88
CTSB-229ENST00000533572 GINM1Q9NU53 330 aa20.54■□□□□ 0.88
CTSB-229ENST00000533572 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.54■□□□□ 0.88
CTSB-229ENST00000533572 CCDC171Q6TFL3 1326 aa20.53■□□□□ 0.88
CTSB-229ENST00000533572 SIPA1L1O43166 1804 aa20.53■□□□□ 0.88
CTSB-229ENST00000533572 A0A0G2JLL6 359 aaPredicted RBP20.53■□□□□ 0.88
CTSB-229ENST00000533572 M0R2C6 588 aa20.53■□□□□ 0.88
CTSB-229ENST00000533572 GDF11O95390 407 aa20.53■□□□□ 0.88
CTSB-229ENST00000533572 SP3Q02447 781 aa20.53■□□□□ 0.88
CTSB-229ENST00000533572 PKN2Q16513 984 aaKnown RBP20.53■□□□□ 0.88
CTSB-229ENST00000533572 SLFNL1Q499Z3 407 aa20.53■□□□□ 0.88
CTSB-229ENST00000533572 PRRT2Q7Z6L0 340 aaPredicted RBP20.53■□□□□ 0.88
CTSB-229ENST00000533572 ZNF280CQ8ND82 737 aa20.53■□□□□ 0.88
CTSB-229ENST00000533572 SEC62Q99442 399 aaKnown RBP20.53■□□□□ 0.88
CTSB-229ENST00000533572 NACAP1Q9BZK3 213 aa20.53■□□□□ 0.88
CTSB-229ENST00000533572 DNAJC18Q9H819 358 aa20.53■□□□□ 0.88
CTSB-229ENST00000533572 PATL2C9JE40 543 aaKnown RBP20.52■□□□□ 0.88
CTSB-229ENST00000533572 SGSM2O43147 1006 aa20.52■□□□□ 0.88
CTSB-229ENST00000533572 CHGBP05060 677 aa20.52■□□□□ 0.88
CTSB-229ENST00000533572 SPP2Q13103 211 aa20.52■□□□□ 0.88
CTSB-229ENST00000533572 ARHGEF6Q15052 776 aa20.52■□□□□ 0.88
CTSB-229ENST00000533572 KIAA1211Q6ZU35 1233 aa20.52■□□□□ 0.88
CTSB-229ENST00000533572 PARK7Q99497 189 aaKnown RBP20.52■□□□□ 0.88
CTSB-229ENST00000533572 ESYT1Q9BSJ8 1104 aa20.52■□□□□ 0.88
CTSB-229ENST00000533572 DCP1AQ9NPI6 582 aaPredicted RBP20.52■□□□□ 0.88
CTSB-229ENST00000533572 SLC4A4Q9Y6R1 1079 aa20.52■□□□□ 0.88
CTSB-229ENST00000533572 ATAD5Q96QE3 1844 aa20.52■□□□□ 0.88
CTSB-229ENST00000533572 TLR2O60603 784 aa20.51■□□□□ 0.87
CTSB-229ENST00000533572 RRP1BQ14684 758 aaKnown RBP20.51■□□□□ 0.87
CTSB-229ENST00000533572 ZBTB21Q9ULJ3 1066 aa20.51■□□□□ 0.87
CTSB-229ENST00000533572 CCDC85CA6NKD9 419 aa20.5■□□□□ 0.87
CTSB-229ENST00000533572 KIF22Q14807 665 aa20.5■□□□□ 0.87
CTSB-229ENST00000533572 CD99L2Q8TCZ2 262 aa20.5■□□□□ 0.87
CTSB-229ENST00000533572 CABP5Q9NP86 173 aa20.5■□□□□ 0.87
CTSB-229ENST00000533572 TRIM17Q9Y577 477 aa20.5■□□□□ 0.87
CTSB-229ENST00000533572 EPB41L2O43491 1005 aaKnown RBP20.49■□□□□ 0.87
CTSB-229ENST00000533572 PRKAB2O43741 272 aa20.49■□□□□ 0.87
CTSB-229ENST00000533572 REC8O95072 547 aa20.49■□□□□ 0.87
CTSB-229ENST00000533572 SLC34A2O95436 690 aa20.49■□□□□ 0.87
CTSB-229ENST00000533572 APPP05067 770 aa20.49■□□□□ 0.87
CTSB-229ENST00000533572 PLCD1P51178 756 aa20.49■□□□□ 0.87
CTSB-229ENST00000533572 MOGSQ13724 837 aa20.49■□□□□ 0.87
CTSB-229ENST00000533572 CERKLQ49MI3 558 aaPredicted RBP20.49■□□□□ 0.87
CTSB-229ENST00000533572 DSCC1Q9BVC3 393 aa20.49■□□□□ 0.87
CTSB-229ENST00000533572 TAOK2Q9UL54 1235 aa20.49■□□□□ 0.87
CTSB-229ENST00000533572 PHIPQ8WWQ0 1821 aa20.48■□□□□ 0.87
CTSB-229ENST00000533572 DDX60LQ5H9U9 1706 aaKnown RBP20.48■□□□□ 0.87
CTSB-229ENST00000533572 GH2P01242 217 aa20.48■□□□□ 0.87
CTSB-229ENST00000533572 HMGCS2P54868 508 aa20.48■□□□□ 0.87
CTSB-229ENST00000533572 PABPC4Q13310 644 aaKnown RBP eCLIP20.48■□□□□ 0.87
CTSB-229ENST00000533572 ALX1Q15699 326 aa20.48■□□□□ 0.87
CTSB-229ENST00000533572 GPAT2Q6NUI2 795 aa20.48■□□□□ 0.87
CTSB-229ENST00000533572 TATDN1Q6P1N9 297 aa20.48■□□□□ 0.87
CTSB-229ENST00000533572 ZNF589Q86UQ0 364 aaPredicted RBP20.48■□□□□ 0.87
CTSB-229ENST00000533572 PROCA1Q8NCQ7 364 aaPredicted RBP20.48■□□□□ 0.87
CTSB-229ENST00000533572 WDR18Q9BV38 432 aa20.48■□□□□ 0.87
CTSB-229ENST00000533572 EFCC1Q9HA90 598 aa20.48■□□□□ 0.87
CTSB-229ENST00000533572 TMOD4Q9NZQ9 345 aa20.48■□□□□ 0.87
CTSB-229ENST00000533572 PNMA3Q9UL41 463 aa20.48■□□□□ 0.87
CTSB-229ENST00000533572 AGTPBP1Q9UPW5 1226 aa20.48■□□□□ 0.87
CTSB-229ENST00000533572 SLC45A1Q9Y2W3 748 aa20.48■□□□□ 0.87
CTSB-229ENST00000533572 ZMYM6O95789 1325 aa20.48■□□□□ 0.87
CTSB-229ENST00000533572 HSPD1P10809 573 aaKnown RBP20.47■□□□□ 0.87
CTSB-229ENST00000533572 ABCB5Q2M3G0 1257 aa20.47■□□□□ 0.87
CTSB-229ENST00000533572 FBXO46Q6PJ61 603 aaPredicted RBP20.47■□□□□ 0.87
CTSB-229ENST00000533572 CCDC129Q6ZRS4 1044 aa20.47■□□□□ 0.87
CTSB-229ENST00000533572 SMCR8Q8TEV9 937 aaPredicted RBP20.47■□□□□ 0.87
CTSB-229ENST00000533572 ARPP21Q9UBL0 812 aaPredicted RBP20.47■□□□□ 0.87
CTSB-229ENST00000533572 SWAP70Q9UH65 585 aa20.47■□□□□ 0.87
CTSB-229ENST00000533572 CPA4Q9UI42 421 aa20.47■□□□□ 0.87
CTSB-229ENST00000533572 CTNNA3Q9UI47 895 aa20.47■□□□□ 0.87
CTSB-229ENST00000533572 PTPRFP10586 1907 aa20.47■□□□□ 0.87
CTSB-229ENST00000533572 GSG1L2A8MUP6 293 aa20.46■□□□□ 0.87
CTSB-229ENST00000533572 CYP2C8P10632 490 aa20.46■□□□□ 0.87
CTSB-229ENST00000533572 CYP2D6P10635 497 aa20.46■□□□□ 0.87
CTSB-229ENST00000533572 TDO2P48775 406 aa20.46■□□□□ 0.87
CTSB-229ENST00000533572 MTMR2Q13614 643 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms