RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 RIOK1Q9BRS2 568 aaKnown RBP18.71■□□□□ 0.59
CPSF1-211ENST00000533492 CRNKL1Q9BZJ0 848 aaKnown RBP18.71■□□□□ 0.59
CPSF1-211ENST00000533492 PAG1Q9NWQ8 432 aa18.71■□□□□ 0.59
CPSF1-211ENST00000533492 SERPINB13Q9UIV8 391 aa18.71■□□□□ 0.59
CPSF1-211ENST00000533492 ZNF532Q9HCE3 1301 aa18.71■□□□□ 0.59
CPSF1-211ENST00000533492 SIPA1L1O43166 1804 aa18.7■□□□□ 0.58
CPSF1-211ENST00000533492 C19orf81C9J6K1 198 aa18.7■□□□□ 0.58
CPSF1-211ENST00000533492 USP17L10C9JJH3 530 aa18.7■□□□□ 0.58
CPSF1-211ENST00000533492 POLR3DP05423 398 aaPredicted RBP18.7■□□□□ 0.58
CPSF1-211ENST00000533492 GRK4P32298 578 aa18.7■□□□□ 0.58
CPSF1-211ENST00000533492 MTMR2Q13614 643 aa18.7■□□□□ 0.58
CPSF1-211ENST00000533492 EDC3Q96F86 508 aaKnown RBP18.7■□□□□ 0.58
CPSF1-211ENST00000533492 BIN2Q9UBW5 565 aaPredicted RBP18.7■□□□□ 0.58
CPSF1-211ENST00000533492 ZBTB21Q9ULJ3 1066 aa18.7■□□□□ 0.58
CPSF1-211ENST00000533492 CENPFP49454 3210 aa18.69■□□□□ 0.58
CPSF1-211ENST00000533492 TNPO2O14787 897 aaKnown RBP18.69■□□□□ 0.58
CPSF1-211ENST00000533492 GCLCP48506 637 aaPredicted RBP18.69■□□□□ 0.58
CPSF1-211ENST00000533492 JAG1P78504 1218 aa18.69■□□□□ 0.58
CPSF1-211ENST00000533492 PRKCZQ05513 592 aa18.69■□□□□ 0.58
CPSF1-211ENST00000533492 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.69■□□□□ 0.581e-9■■■■□ 21.4
CPSF1-211ENST00000533492 ASCC2Q9H1I8 757 aaPredicted RBP18.69■□□□□ 0.58
CPSF1-211ENST00000533492 EHD4Q9H223 541 aa18.69■□□□□ 0.58
CPSF1-211ENST00000533492 SMARCA5O60264 1052 aaPredicted RBP18.68■□□□□ 0.58
CPSF1-211ENST00000533492 GH2P01242 217 aa18.68■□□□□ 0.58
CPSF1-211ENST00000533492 IRX3P78415 501 aaPredicted RBP18.68■□□□□ 0.58
CPSF1-211ENST00000533492 FAM110CQ1W6H9 321 aa18.68■□□□□ 0.58
CPSF1-211ENST00000533492 SHROOM1Q2M3G4 852 aaPredicted RBP18.68■□□□□ 0.58
CPSF1-211ENST00000533492 CERKLQ49MI3 558 aaPredicted RBP18.68■□□□□ 0.58
CPSF1-211ENST00000533492 TATDN1Q6P1N9 297 aa18.68■□□□□ 0.58
CPSF1-211ENST00000533492 COA7Q96BR5 231 aa18.68■□□□□ 0.58
CPSF1-211ENST00000533492 HAUS7Q99871 368 aa18.68■□□□□ 0.58
CPSF1-211ENST00000533492 GABRQQ9UN88 632 aa18.68■□□□□ 0.58
CPSF1-211ENST00000533492 MGAMO43451 1857 aa18.67■□□□□ 0.58
CPSF1-211ENST00000533492 PLCD1P51178 756 aa18.67■□□□□ 0.58
CPSF1-211ENST00000533492 UBXN2AP68543 259 aa18.67■□□□□ 0.58
CPSF1-211ENST00000533492 PRPF38BQ5VTL8 546 aaKnown RBP18.67■□□□□ 0.58
CPSF1-211ENST00000533492 CABP5Q9NP86 173 aa18.67■□□□□ 0.58
CPSF1-211ENST00000533492 MCM9Q9NXL9 1143 aa18.67■□□□□ 0.58
CPSF1-211ENST00000533492 RBBP6Q7Z6E9 1792 aaKnown RBP18.66■□□□□ 0.58
CPSF1-211ENST00000533492 TCRBV5S4A2TA0A5A2 114 aa18.66■□□□□ 0.58
CPSF1-211ENST00000533492 FLT3LGP49771 235 aa18.66■□□□□ 0.58
CPSF1-211ENST00000533492 RAB3GAP1Q15042 981 aa18.66■□□□□ 0.58
CPSF1-211ENST00000533492 ABCB5Q2M3G0 1257 aa18.66■□□□□ 0.58
CPSF1-211ENST00000533492 USP17L2Q6R6M4 530 aa18.66■□□□□ 0.58
CPSF1-211ENST00000533492 SLAIN1Q8ND83 568 aa18.66■□□□□ 0.58
CPSF1-211ENST00000533492 FEZ1Q99689 392 aa18.66■□□□□ 0.58
CPSF1-211ENST00000533492 DCTPP1Q9H773 170 aa18.66■□□□□ 0.58
CPSF1-211ENST00000533492 LOC285556D6RIA3 1793 aa18.65■□□□□ 0.58
CPSF1-211ENST00000533492 ADCY3O60266 1144 aa18.65■□□□□ 0.58
CPSF1-211ENST00000533492 HOXA7P31268 230 aaPredicted RBP18.65■□□□□ 0.58
CPSF1-211ENST00000533492 ADD2P35612 726 aa18.65■□□□□ 0.58
CPSF1-211ENST00000533492 MTFR1Q15390 333 aa18.65■□□□□ 0.58
CPSF1-211ENST00000533492 ZSCAN25Q6NSZ9 544 aa18.65■□□□□ 0.58
CPSF1-211ENST00000533492 LCORLQ8N3X6 602 aa18.65■□□□□ 0.58
CPSF1-211ENST00000533492 SDR42E1Q8WUS8 393 aa18.65■□□□□ 0.58
CPSF1-211ENST00000533492 ARMT1Q9H993 441 aa18.65■□□□□ 0.58
CPSF1-211ENST00000533492 TAOK2Q9UL54 1235 aa18.65■□□□□ 0.58
CPSF1-211ENST00000533492 MBD4O95243 580 aa18.64■□□□□ 0.57
CPSF1-211ENST00000533492 GPATCH3Q96I76 525 aa18.64■□□□□ 0.57
CPSF1-211ENST00000533492 P2RX7Q99572 595 aaKnown RBP18.64■□□□□ 0.57
CPSF1-211ENST00000533492 DCP1AQ9NPI6 582 aaPredicted RBP18.64■□□□□ 0.57
CPSF1-211ENST00000533492 ECHDC1Q9NTX5 307 aa18.64■□□□□ 0.57
CPSF1-211ENST00000533492 SHMT1P34896 483 aa18.63■□□□□ 0.57
CPSF1-211ENST00000533492 IRF5Q13568 498 aa18.63■□□□□ 0.57
CPSF1-211ENST00000533492 ZYXQ15942 572 aaKnown RBP18.63■□□□□ 0.57
CPSF1-211ENST00000533492 SLFNL1Q499Z3 407 aa18.63■□□□□ 0.57
CPSF1-211ENST00000533492 DDRGK1Q96HY6 314 aa18.63■□□□□ 0.57
CPSF1-211ENST00000533492 RNF208Q9H0X6 261 aa18.63■□□□□ 0.57
CPSF1-211ENST00000533492 EMILIN3Q9NT22 766 aa18.63■□□□□ 0.57
CPSF1-211ENST00000533492 ATP8A2Q9NTI2 1148 aa18.63■□□□□ 0.57
CPSF1-211ENST00000533492 MPHOSPH10O00566 681 aaKnown RBP18.62■□□□□ 0.57
CPSF1-211ENST00000533492 CCL5P13501 91 aa18.62■□□□□ 0.57
CPSF1-211ENST00000533492 USP14P54578 494 aa18.62■□□□□ 0.57
CPSF1-211ENST00000533492 HERVK_113P62684 666 aa18.62■□□□□ 0.57
CPSF1-211ENST00000533492 UBE3CQ15386 1083 aa18.62■□□□□ 0.57
CPSF1-211ENST00000533492 AMOTL1Q8IY63 956 aa18.62■□□□□ 0.57
CPSF1-211ENST00000533492 NKX2-3Q8TAU0 364 aa18.62■□□□□ 0.57
CPSF1-211ENST00000533492 PXYLP1Q8TE99 480 aa18.62■□□□□ 0.57
CPSF1-211ENST00000533492 DOCK3Q8IZD9 2030 aa18.62■□□□□ 0.57
CPSF1-211ENST00000533492 NAV1Q8NEY1 1877 aa18.61■□□□□ 0.57
CPSF1-211ENST00000533492 PRKAB2O43741 272 aa18.61■□□□□ 0.57
CPSF1-211ENST00000533492 ELNP15502 786 aa18.61■□□□□ 0.57
CPSF1-211ENST00000533492 GABPAQ06546 454 aa18.61■□□□□ 0.57
CPSF1-211ENST00000533492 CCAR1Q8IX12 1150 aaKnown RBP18.61■□□□□ 0.57
CPSF1-211ENST00000533492 GPRC5AQ8NFJ5 357 aa18.61■□□□□ 0.57
CPSF1-211ENST00000533492 GTF3C2Q8WUA4 911 aaPredicted RBP18.61■□□□□ 0.57
CPSF1-211ENST00000533492 MORF4L1Q9UBU8 362 aa18.61■□□□□ 0.57
CPSF1-211ENST00000533492 USP17L15C9J2P7 530 aa18.6■□□□□ 0.57
CPSF1-211ENST00000533492 USP17L13C9JLJ4 530 aa18.6■□□□□ 0.57
CPSF1-211ENST00000533492 USP17L11C9JVI0 530 aa18.6■□□□□ 0.57
CPSF1-211ENST00000533492 USP17L18D6R9N7 530 aa18.6■□□□□ 0.57
CPSF1-211ENST00000533492 USP17L22D6RA61 530 aa18.6■□□□□ 0.57
CPSF1-211ENST00000533492 USP17L17D6RBQ6 530 aa18.6■□□□□ 0.57
CPSF1-211ENST00000533492 USP17L19D6RCP7 530 aa18.6■□□□□ 0.57
CPSF1-211ENST00000533492 USP17L20D6RJB6 530 aa18.6■□□□□ 0.57
CPSF1-211ENST00000533492 GJB1P08034 283 aa18.6■□□□□ 0.57
CPSF1-211ENST00000533492 CYP2D6P10635 497 aa18.6■□□□□ 0.57
CPSF1-211ENST00000533492 RRP1P56182 461 aaKnown RBP18.6■□□□□ 0.57
CPSF1-211ENST00000533492 USP17L24Q0WX57 530 aa18.6■□□□□ 0.57
CPSF1-211ENST00000533492 ACER1Q8TDN7 264 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms