RNA–Protein interactions for RNA: ENST00000533413.5

CKAP5-212, Transcript of cytoskeleton associated protein 5, humanhuman

TSL 1 (best)

Gene CKAP5, Length 3,084 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP5-212ENST00000533413 KMT5AQ9NQR1 393 aa6.22□□□□□ -1.41
CKAP5-212ENST00000533413 PDRG1Q9NUG6 133 aa6.22□□□□□ -1.41
CKAP5-212ENST00000533413 EVLQ9UI08 416 aaPredicted RBP6.22□□□□□ -1.41
CKAP5-212ENST00000533413 AKAP2Q9Y2D5 859 aa6.22□□□□□ -1.41
CKAP5-212ENST00000533413 ZNF652Q9Y2D9 606 aa6.22□□□□□ -1.41
CKAP5-212ENST00000533413 RPAP1Q9BWH6 1393 aaPredicted RBP6.22□□□□□ -1.41
CKAP5-212ENST00000533413 LAMB2P55268 1798 aa6.22□□□□□ -1.41
CKAP5-212ENST00000533413 hCG_1984214I3L0E3 225 aa6.22□□□□□ -1.41
CKAP5-212ENST00000533413 IFRD1O00458 451 aaPredicted RBP6.22□□□□□ -1.41
CKAP5-212ENST00000533413 VAMP1P23763 118 aa6.22□□□□□ -1.41
CKAP5-212ENST00000533413 POU5F1BQ06416 359 aa6.22□□□□□ -1.41
CKAP5-212ENST00000533413 MAP3K11Q16584 847 aa6.22□□□□□ -1.41
CKAP5-212ENST00000533413 SLF2Q8IX21 1173 aa6.22□□□□□ -1.41
CKAP5-212ENST00000533413 CHPFQ8IZ52 775 aa6.22□□□□□ -1.41
CKAP5-212ENST00000533413 STK32AQ8WU08 396 aa6.22□□□□□ -1.41
CKAP5-212ENST00000533413 ERP27Q96DN0 273 aa6.22□□□□□ -1.41
CKAP5-212ENST00000533413 KIF1BPQ96EK5 621 aa6.22□□□□□ -1.41
CKAP5-212ENST00000533413 SH2B1Q9NRF2 756 aaPredicted RBP6.22□□□□□ -1.41
CKAP5-212ENST00000533413 TMCC3Q9ULS5 477 aa6.22□□□□□ -1.41
CKAP5-212ENST00000533413 CHMP3Q9Y3E7 222 aa6.22□□□□□ -1.41
CKAP5-212ENST00000533413 CEP83Q9Y592 693 aa6.22□□□□□ -1.41
CKAP5-212ENST00000533413 CYP46A1Q9Y6A2 500 aa6.22□□□□□ -1.41
CKAP5-212ENST00000533413 PALM3A6NDB9 673 aaPredicted RBP6.21□□□□□ -1.42
CKAP5-212ENST00000533413 ZKSCAN1P17029 563 aaPredicted RBP6.21□□□□□ -1.42
CKAP5-212ENST00000533413 KCNQ4P56696 695 aa6.21□□□□□ -1.42
CKAP5-212ENST00000533413 KRT85P78386 507 aa6.21□□□□□ -1.42
CKAP5-212ENST00000533413 CT47A1Q5JQC4 288 aaPredicted RBP6.21□□□□□ -1.42
CKAP5-212ENST00000533413 PPP4R4Q6NUP7 873 aa6.21□□□□□ -1.42
CKAP5-212ENST00000533413 RUFY3Q7L099 469 aa6.21□□□□□ -1.42
CKAP5-212ENST00000533413 CCDC89Q8N998 374 aa6.21□□□□□ -1.42
CKAP5-212ENST00000533413 FAM200AQ8TCP9 573 aa6.21□□□□□ -1.42
CKAP5-212ENST00000533413 ATRIPQ8WXE1 791 aa6.21□□□□□ -1.42
CKAP5-212ENST00000533413 JAKMIP1Q96N16 626 aaKnown RBP6.21□□□□□ -1.42
CKAP5-212ENST00000533413 NUP62CLQ9H1M0 184 aa6.21□□□□□ -1.42
CKAP5-212ENST00000533413 SUDS3Q9H7L9 328 aaPredicted RBP6.21□□□□□ -1.42
CKAP5-212ENST00000533413 PYCARDQ9ULZ3 195 aa6.21□□□□□ -1.42
CKAP5-212ENST00000533413 FARP1Q9Y4F1 1045 aaPredicted RBP6.21□□□□□ -1.42
CKAP5-212ENST00000533413 CD2APQ9Y5K6 639 aa6.21□□□□□ -1.42
CKAP5-212ENST00000533413 RIC1Q4ADV7 1423 aa6.21□□□□□ -1.42
CKAP5-212ENST00000533413 C10orf71Q711Q0 1435 aa6.21□□□□□ -1.42
CKAP5-212ENST00000533413 BRCA1P38398 1863 aaKnown RBP6.21□□□□□ -1.42
CKAP5-212ENST00000533413 ERVV-1B6SEH8 477 aa6.21□□□□□ -1.42
CKAP5-212ENST00000533413 BPNT1O95861 308 aa6.21□□□□□ -1.42
CKAP5-212ENST00000533413 PDCP20941 246 aa6.21□□□□□ -1.42
CKAP5-212ENST00000533413 ADD2P35612 726 aa6.21□□□□□ -1.42
CKAP5-212ENST00000533413 GSCP56915 257 aaPredicted RBP6.21□□□□□ -1.42
CKAP5-212ENST00000533413 PPP2R5BQ15173 497 aa6.21□□□□□ -1.42
CKAP5-212ENST00000533413 Q3C1V9 767 aa6.21□□□□□ -1.42
CKAP5-212ENST00000533413 TSGA10IPQ3SY00 556 aa6.21□□□□□ -1.42
CKAP5-212ENST00000533413 PPP1R42Q7Z4L9 355 aa6.21□□□□□ -1.42
CKAP5-212ENST00000533413 PHC3Q8NDX5 983 aa6.21□□□□□ -1.42
CKAP5-212ENST00000533413 RHPN1Q8TCX5 695 aa6.21□□□□□ -1.42
CKAP5-212ENST00000533413 TTC14Q96N46 770 aa6.21□□□□□ -1.42
CKAP5-212ENST00000533413 RYDENQ9NUL5 291 aaKnown RBP6.21□□□□□ -1.42
CKAP5-212ENST00000533413 ZBTB1Q9Y2K1 713 aa6.21□□□□□ -1.42
CKAP5-212ENST00000533413 ARFGEF1Q9Y6D6 1849 aa6.2□□□□□ -1.42
CKAP5-212ENST00000533413 SRGAP3O43295 1099 aa6.2□□□□□ -1.42
CKAP5-212ENST00000533413 ZBTB7AO95365 584 aa6.2□□□□□ -1.42
CKAP5-212ENST00000533413 CCDC172P0C7W6 258 aa6.2□□□□□ -1.42
CKAP5-212ENST00000533413 GYS1P13807 737 aa6.2□□□□□ -1.42
CKAP5-212ENST00000533413 MAN1A1P33908 653 aa6.2□□□□□ -1.42
CKAP5-212ENST00000533413 RBM5P52756 815 aaKnown RBP eCLIP6.2□□□□□ -1.42
CKAP5-212ENST00000533413 NCBP1Q09161 790 aaKnown RBP6.2□□□□□ -1.42
CKAP5-212ENST00000533413 SH3D19Q5HYK7 790 aa6.2□□□□□ -1.42
CKAP5-212ENST00000533413 PDXDC1Q6P996 788 aa6.2□□□□□ -1.42
CKAP5-212ENST00000533413 RASEFQ8IZ41 740 aa6.2□□□□□ -1.42
CKAP5-212ENST00000533413 KIF18AQ8NI77 898 aa6.2□□□□□ -1.42
CKAP5-212ENST00000533413 TRIM5Q9C035 493 aa6.2□□□□□ -1.42
CKAP5-212ENST00000533413 LSG1Q9H089 658 aaKnown RBP6.2□□□□□ -1.42
CKAP5-212ENST00000533413 DONSONQ9NYP3 566 aa6.2□□□□□ -1.42
CKAP5-212ENST00000533413 MTMR6Q9Y217 621 aa6.2□□□□□ -1.42
CKAP5-212ENST00000533413 CARMIL3Q8ND23 1372 aa6.2□□□□□ -1.42
CKAP5-212ENST00000533413 N4BP2Q86UW6 1770 aaPredicted RBP6.2□□□□□ -1.42
CKAP5-212ENST00000533413 KCNQ3O43525 872 aa6.2□□□□□ -1.42
CKAP5-212ENST00000533413 KIF1CO43896 1103 aaKnown RBP6.2□□□□□ -1.42
CKAP5-212ENST00000533413 GLRX3O76003 335 aaKnown RBP6.2□□□□□ -1.42
CKAP5-212ENST00000533413 SKILP12757 684 aa6.2□□□□□ -1.42
CKAP5-212ENST00000533413 NDUFV2P19404 249 aa6.2□□□□□ -1.42
CKAP5-212ENST00000533413 PTGS1P23219 599 aa6.2□□□□□ -1.42
CKAP5-212ENST00000533413 MAPRE1Q15691 268 aaKnown RBP6.2□□□□□ -1.42
CKAP5-212ENST00000533413 TBC1D10BQ4KMP7 808 aaPredicted RBP6.2□□□□□ -1.42
CKAP5-212ENST00000533413 VPS53Q5VIR6 699 aa6.2□□□□□ -1.42
CKAP5-212ENST00000533413 KIF6Q6ZMV9 814 aa6.2□□□□□ -1.42
CKAP5-212ENST00000533413 SSH3Q8TE77 659 aa6.2□□□□□ -1.42
CKAP5-212ENST00000533413 CEP89Q96ST8 783 aa6.2□□□□□ -1.42
CKAP5-212ENST00000533413 SLX1AQ9BQ83 275 aa6.2□□□□□ -1.42
CKAP5-212ENST00000533413 FUCA2Q9BTY2 467 aa6.2□□□□□ -1.42
CKAP5-212ENST00000533413 PDGFDQ9GZP0 370 aaPredicted RBP6.2□□□□□ -1.42
CKAP5-212ENST00000533413 USP44Q9H0E7 712 aa6.2□□□□□ -1.42
CKAP5-212ENST00000533413 TNMDQ9H2S6 317 aa6.2□□□□□ -1.42
CKAP5-212ENST00000533413 RBM28Q9NW13 759 aaKnown RBP6.2□□□□□ -1.42
CKAP5-212ENST00000533413 PARP3Q9Y6F1 533 aa6.2□□□□□ -1.42
CKAP5-212ENST00000533413 CPA1P15085 419 aa6.19□□□□□ -1.42
CKAP5-212ENST00000533413 TYRO3Q06418 890 aa6.19□□□□□ -1.42
CKAP5-212ENST00000533413 NFX1Q12986 1120 aaKnown RBP6.19□□□□□ -1.42
CKAP5-212ENST00000533413 BRD3Q15059 726 aa6.19□□□□□ -1.42
CKAP5-212ENST00000533413 CAMK4Q16566 473 aa6.19□□□□□ -1.42
CKAP5-212ENST00000533413 PRPF40BQ6NWY9 871 aaKnown RBP6.19□□□□□ -1.42
CKAP5-212ENST00000533413 CCDC186Q7Z3E2 898 aa6.19□□□□□ -1.42
CKAP5-212ENST00000533413 FERMT3Q86UX7 667 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms