RNA–Protein interactions for RNA: ENST00000533162.1

PUF60-221, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 3

Gene PUF60, Length 761 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-221ENST00000533162 SLFNL1Q499Z3 407 aa17.84■□□□□ 0.45
PUF60-221ENST00000533162 CTU1Q7Z7A3 348 aaKnown RBP17.84■□□□□ 0.45
PUF60-221ENST00000533162 PROCA1Q8NCQ7 364 aaPredicted RBP17.84■□□□□ 0.45
PUF60-221ENST00000533162 OSBP2Q969R2 916 aa17.84■□□□□ 0.45
PUF60-221ENST00000533162 RILPL2Q969X0 211 aa17.84■□□□□ 0.45
PUF60-221ENST00000533162 WDR18Q9BV38 432 aa17.84■□□□□ 0.45
PUF60-221ENST00000533162 OSBPL3Q9H4L5 887 aa17.84■□□□□ 0.45
PUF60-221ENST00000533162 ZNF287Q9HBT7 754 aa17.84■□□□□ 0.45
PUF60-221ENST00000533162 PNMA3Q9UL41 463 aa17.84■□□□□ 0.45
PUF60-221ENST00000533162 PATL2C9JE40 543 aaKnown RBP17.83■□□□□ 0.44
PUF60-221ENST00000533162 GPAA1O43292 621 aa17.83■□□□□ 0.44
PUF60-221ENST00000533162 TLR2O60603 784 aa17.83■□□□□ 0.44
PUF60-221ENST00000533162 GDF11O95390 407 aa17.83■□□□□ 0.44
PUF60-221ENST00000533162 SP3Q02447 781 aa17.83■□□□□ 0.44
PUF60-221ENST00000533162 DNAJC18Q9H819 358 aa17.83■□□□□ 0.44
PUF60-221ENST00000533162 ZBTB21Q9ULJ3 1066 aa17.83■□□□□ 0.44
PUF60-221ENST00000533162 MYO5AQ9Y4I1 1855 aaKnown RBP17.83■□□□□ 0.44
PUF60-221ENST00000533162 USP17L10C9JJH3 530 aa17.82■□□□□ 0.44
PUF60-221ENST00000533162 USP17L12C9JPN9 530 aa17.82■□□□□ 0.44
PUF60-221ENST00000533162 USP17L21D6R901 530 aa17.82■□□□□ 0.44
PUF60-221ENST00000533162 GH2P01242 217 aa17.82■□□□□ 0.44
PUF60-221ENST00000533162 TDO2P48775 406 aa17.82■□□□□ 0.44
PUF60-221ENST00000533162 MFAP1P55081 439 aaKnown RBP17.82■□□□□ 0.44
PUF60-221ENST00000533162 RAB3GAP1Q15042 981 aa17.82■□□□□ 0.44
PUF60-221ENST00000533162 ZMYM1Q5SVZ6 1142 aa17.82■□□□□ 0.44
PUF60-221ENST00000533162 C12orf60Q5U649 245 aa17.82■□□□□ 0.44
PUF60-221ENST00000533162 PLEKHM2Q8IWE5 1019 aa17.82■□□□□ 0.44
PUF60-221ENST00000533162 HELLSQ9NRZ9 838 aa17.82■□□□□ 0.44
PUF60-221ENST00000533162 AGTPBP1Q9UPW5 1226 aa17.82■□□□□ 0.44
PUF60-221ENST00000533162 HIP1O00291 1037 aa17.81■□□□□ 0.44
PUF60-221ENST00000533162 MPHOSPH10O00566 681 aaKnown RBP17.81■□□□□ 0.44
PUF60-221ENST00000533162 CHGBP05060 677 aa17.81■□□□□ 0.44
PUF60-221ENST00000533162 SLC3A2P08195 630 aaKnown RBP17.81■□□□□ 0.44
PUF60-221ENST00000533162 OSBPP22059 807 aa17.81■□□□□ 0.44
PUF60-221ENST00000533162 BACE1P56817 501 aa17.81■□□□□ 0.44
PUF60-221ENST00000533162 GABPAQ06546 454 aa17.81■□□□□ 0.44
PUF60-221ENST00000533162 SBK1Q52WX2 424 aa17.81■□□□□ 0.44
PUF60-221ENST00000533162 CTR9Q6PD62 1173 aa17.81■□□□□ 0.44
PUF60-221ENST00000533162 CCDC17Q96LX7 622 aa17.81■□□□□ 0.44
PUF60-221ENST00000533162 FEZ1Q99689 392 aa17.81■□□□□ 0.44
PUF60-221ENST00000533162 FOCADQ5VW36 1801 aa17.8■□□□□ 0.44
PUF60-221ENST00000533162 NEFLP07196 543 aa17.8■□□□□ 0.44
PUF60-221ENST00000533162 SHMT1P34896 483 aa17.8■□□□□ 0.44
PUF60-221ENST00000533162 USP14P54578 494 aa17.8■□□□□ 0.44
PUF60-221ENST00000533162 RRP1BQ14684 758 aaKnown RBP17.8■□□□□ 0.44
PUF60-221ENST00000533162 SH3D19Q5HYK7 790 aa17.8■□□□□ 0.44
PUF60-221ENST00000533162 IFFO2Q5TF58 517 aa17.8■□□□□ 0.44
PUF60-221ENST00000533162 SMCR8Q8TEV9 937 aaPredicted RBP17.8■□□□□ 0.44
PUF60-221ENST00000533162 MCOLN1Q9GZU1 580 aa17.8■□□□□ 0.44
PUF60-221ENST00000533162 R3HDMLQ9H3Y0 253 aa17.8■□□□□ 0.44
PUF60-221ENST00000533162 MKNK2Q9HBH9 465 aa17.8■□□□□ 0.44
PUF60-221ENST00000533162 GSG1L2A8MUP6 293 aa17.79■□□□□ 0.44
PUF60-221ENST00000533162 MINDY4BA8MYZ0 360 aa17.79■□□□□ 0.44
PUF60-221ENST00000533162 M0R2C6 588 aa17.79■□□□□ 0.44
PUF60-221ENST00000533162 HMGCS2P54868 508 aa17.79■□□□□ 0.44
PUF60-221ENST00000533162 MTMR2Q13614 643 aa17.79■□□□□ 0.44
PUF60-221ENST00000533162 MCMDC2Q4G0Z9 681 aa17.79■□□□□ 0.44
PUF60-221ENST00000533162 USP17L2Q6R6M4 530 aa17.79■□□□□ 0.44
PUF60-221ENST00000533162 TMEM179Q6ZVK1 233 aa17.79■□□□□ 0.44
PUF60-221ENST00000533162 NAPBQ9H115 298 aa17.79■□□□□ 0.44
PUF60-221ENST00000533162 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.79■□□□□ 0.44
PUF60-221ENST00000533162 DOCK1Q14185 1865 aa17.78■□□□□ 0.44
PUF60-221ENST00000533162 CYP2D6P10635 497 aa17.78■□□□□ 0.44
PUF60-221ENST00000533162 CDK8P49336 464 aa17.78■□□□□ 0.44
PUF60-221ENST00000533162 MOGSQ13724 837 aa17.78■□□□□ 0.44
PUF60-221ENST00000533162 GPAT2Q6NUI2 795 aa17.78■□□□□ 0.44
PUF60-221ENST00000533162 C16orf86Q6ZW13 317 aa17.78■□□□□ 0.44
PUF60-221ENST00000533162 CCDC84Q86UT8 332 aaPredicted RBP17.78■□□□□ 0.44
PUF60-221ENST00000533162 IFNL3Q8IZI9 196 aa17.78■□□□□ 0.44
PUF60-221ENST00000533162 SH2D4AQ9H788 454 aa17.78■□□□□ 0.44
PUF60-221ENST00000533162 EFCC1Q9HA90 598 aa17.78■□□□□ 0.44
PUF60-221ENST00000533162 LAMB1P07942 1786 aa17.78■□□□□ 0.44
PUF60-221ENST00000533162 GNRH1P01148 92 aa17.77■□□□□ 0.44
PUF60-221ENST00000533162 CENPBP07199 599 aaPredicted RBP17.77■□□□□ 0.44
PUF60-221ENST00000533162 DYNLL2Q96FJ2 89 aa17.77■□□□□ 0.44
PUF60-221ENST00000533162 ARHGEF10LQ9HCE6 1279 aa17.77■□□□□ 0.44
PUF60-221ENST00000533162 TRIM17Q9Y577 477 aa17.77■□□□□ 0.44
PUF60-221ENST00000533162 MYH1P12882 1939 aa17.76■□□□□ 0.43
PUF60-221ENST00000533162 HOXD10P28358 340 aa17.76■□□□□ 0.43
PUF60-221ENST00000533162 IRX3P78415 501 aaPredicted RBP17.76■□□□□ 0.43
PUF60-221ENST00000533162 PDE4BQ07343 736 aa17.76■□□□□ 0.43
PUF60-221ENST00000533162 C17orf99Q6UX52 265 aa17.76■□□□□ 0.43
PUF60-221ENST00000533162 ZNF444Q8N0Y2 327 aaPredicted RBP17.76■□□□□ 0.43
PUF60-221ENST00000533162 CD99L2Q8TCZ2 262 aa17.76■□□□□ 0.43
PUF60-221ENST00000533162 GTF3C2Q8WUA4 911 aaPredicted RBP17.76■□□□□ 0.43
PUF60-221ENST00000533162 ABHD8Q96I13 439 aa17.76■□□□□ 0.43
PUF60-221ENST00000533162 SEC62Q99442 399 aaKnown RBP17.76■□□□□ 0.43
PUF60-221ENST00000533162 DIAPH3Q9NSV4 1193 aa17.76■□□□□ 0.43
PUF60-221ENST00000533162 CPA4Q9UI42 421 aa17.76■□□□□ 0.43
PUF60-221ENST00000533162 CYP2C8P10632 490 aa17.75■□□□□ 0.43
PUF60-221ENST00000533162 SDSP20132 328 aa17.75■□□□□ 0.43
PUF60-221ENST00000533162 GCLCP48506 637 aaPredicted RBP17.75■□□□□ 0.43
PUF60-221ENST00000533162 FBXO46Q6PJ61 603 aaPredicted RBP17.75■□□□□ 0.43
PUF60-221ENST00000533162 KIAA1683Q9H0B3 1180 aa17.75■□□□□ 0.43
PUF60-221ENST00000533162 CDK5RAP2Q96SN8 1893 aa17.75■□□□□ 0.43
PUF60-221ENST00000533162 MYH7P12883 1935 aa17.74■□□□□ 0.43
PUF60-221ENST00000533162 NAV1Q8NEY1 1877 aa17.74■□□□□ 0.43
PUF60-221ENST00000533162 CYP2D7A0A087X1C5 515 aa17.74■□□□□ 0.43
PUF60-221ENST00000533162 HOXA7P31268 230 aaPredicted RBP17.74■□□□□ 0.43
PUF60-221ENST00000533162 PRMT2P55345 433 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms