RNA–Protein interactions for RNA: ENST00000533078.5

CMTM1-216, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 565 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-216ENST00000533078 DDX60LQ5H9U9 1706 aaKnown RBP14.18□□□□□ -0.14
CMTM1-216ENST00000533078 USP17L10C9JJH3 530 aa14.18□□□□□ -0.14
CMTM1-216ENST00000533078 GLRX3O76003 335 aaKnown RBP14.18□□□□□ -0.14
CMTM1-216ENST00000533078 GNAI2P04899 355 aa14.18□□□□□ -0.14
CMTM1-216ENST00000533078 ARID4AP29374 1257 aaPredicted RBP14.18□□□□□ -0.14
CMTM1-216ENST00000533078 RGS2P41220 211 aa14.18□□□□□ -0.14
CMTM1-216ENST00000533078 TRIM32Q13049 653 aa14.18□□□□□ -0.14
CMTM1-216ENST00000533078 MTX1Q13505 466 aa14.18□□□□□ -0.14
CMTM1-216ENST00000533078 CCDC158Q5M9N0 1113 aa14.18□□□□□ -0.14
CMTM1-216ENST00000533078 TTC39AQ5SRH9 613 aa14.18□□□□□ -0.14
CMTM1-216ENST00000533078 FOXP4Q8IVH2 680 aaPredicted RBP14.18□□□□□ -0.14
CMTM1-216ENST00000533078 SH3RF3Q8TEJ3 882 aaPredicted RBP14.18□□□□□ -0.14
CMTM1-216ENST00000533078 TRIB2Q92519 343 aa14.18□□□□□ -0.14
CMTM1-216ENST00000533078 AATFQ9NY61 560 aaKnown RBP eCLIP14.18□□□□□ -0.14
CMTM1-216ENST00000533078 IPO8O15397 1037 aaKnown RBP14.17□□□□□ -0.14
CMTM1-216ENST00000533078 CCNA1P78396 465 aa14.17□□□□□ -0.14
CMTM1-216ENST00000533078 PI16Q6UXB8 463 aa14.17□□□□□ -0.14
CMTM1-216ENST00000533078 ZNF384Q8TF68 577 aa14.17□□□□□ -0.14
CMTM1-216ENST00000533078 TGFBRAP1Q8WUH2 860 aa14.17□□□□□ -0.14
CMTM1-216ENST00000533078 ARHGAP45Q92619 1136 aa14.17□□□□□ -0.14
CMTM1-216ENST00000533078 CDCA7LQ96GN5 454 aa14.17□□□□□ -0.14
CMTM1-216ENST00000533078 P2RX7Q99572 595 aaKnown RBP14.17□□□□□ -0.14
CMTM1-216ENST00000533078 PAGR1Q9BTK6 254 aa14.17□□□□□ -0.14
CMTM1-216ENST00000533078 STXBP5LQ9Y2K9 1186 aa14.17□□□□□ -0.14
CMTM1-216ENST00000533078 CUL9Q8IWT3 2517 aa14.17□□□□□ -0.14
CMTM1-216ENST00000533078 IGSF3O75054 1194 aa14.16□□□□□ -0.14
CMTM1-216ENST00000533078 MCAMP43121 646 aa14.16□□□□□ -0.14
CMTM1-216ENST00000533078 ERVK-9P63128 1117 aa14.16□□□□□ -0.14
CMTM1-216ENST00000533078 ERVK-24P63145 666 aa14.16□□□□□ -0.14
CMTM1-216ENST00000533078 OS9Q13438 667 aaPredicted RBP14.16□□□□□ -0.14
CMTM1-216ENST00000533078 MAP3K21Q5TCX8 1036 aa14.16□□□□□ -0.14
CMTM1-216ENST00000533078 PLEKHH3Q7Z736 793 aa14.16□□□□□ -0.14
CMTM1-216ENST00000533078 MAPKAPK5Q8IW41 473 aa14.16□□□□□ -0.14
CMTM1-216ENST00000533078 FEZ1Q99689 392 aa14.16□□□□□ -0.14
CMTM1-216ENST00000533078 APBA2Q99767 749 aa14.16□□□□□ -0.14
CMTM1-216ENST00000533078 MFSD14CQ5VZR4 134 aa14.15□□□□□ -0.14
CMTM1-216ENST00000533078 USP17L2Q6R6M4 530 aa14.15□□□□□ -0.14
CMTM1-216ENST00000533078 GPR142Q7Z601 462 aa14.15□□□□□ -0.14
CMTM1-216ENST00000533078 CERS3Q8IU89 383 aa14.15□□□□□ -0.14
CMTM1-216ENST00000533078 LBHD1Q9BQE6 289 aaPredicted RBP14.15□□□□□ -0.14
CMTM1-216ENST00000533078 PRKAG2Q9UGJ0 569 aa14.15□□□□□ -0.14
CMTM1-216ENST00000533078 ZBTB21Q9ULJ3 1066 aa14.15□□□□□ -0.14
CMTM1-216ENST00000533078 FLT1P17948 1338 aa14.15□□□□□ -0.15
CMTM1-216ENST00000533078 MAST2Q6P0Q8 1798 aa14.14□□□□□ -0.15
CMTM1-216ENST00000533078 GDF11O95390 407 aa14.14□□□□□ -0.15
CMTM1-216ENST00000533078 USP14P54578 494 aa14.14□□□□□ -0.15
CMTM1-216ENST00000533078 PPP4CP60510 307 aa14.14□□□□□ -0.15
CMTM1-216ENST00000533078 CACNB2Q08289 660 aaPredicted RBP14.14□□□□□ -0.15
CMTM1-216ENST00000533078 RRP1BQ14684 758 aaKnown RBP14.14□□□□□ -0.15
CMTM1-216ENST00000533078 WDR78Q5VTH9 848 aa14.14□□□□□ -0.15
CMTM1-216ENST00000533078 TRMT2AQ8IZ69 625 aaKnown RBP14.14□□□□□ -0.15
CMTM1-216ENST00000533078 IVNS1ABPQ9Y6Y0 642 aa14.14□□□□□ -0.15
CMTM1-216ENST00000533078 PFASO15067 1338 aa14.14□□□□□ -0.15
CMTM1-216ENST00000533078 PLXNB2O15031 1838 aa14.13□□□□□ -0.15
CMTM1-216ENST00000533078 MSCO60682 206 aa14.13□□□□□ -0.15
CMTM1-216ENST00000533078 RARSP54136 660 aaKnown RBP14.13□□□□□ -0.15
CMTM1-216ENST00000533078 Q7L0L9 218 aa14.13□□□□□ -0.15
CMTM1-216ENST00000533078 TXNRD2Q9NNW7 524 aa14.13□□□□□ -0.15
CMTM1-216ENST00000533078 SNRKQ9NRH2 765 aa14.13□□□□□ -0.15
CMTM1-216ENST00000533078 PALD1Q9ULE6 856 aa14.13□□□□□ -0.15
CMTM1-216ENST00000533078 RABGAP1Q9Y3P9 1069 aa14.13□□□□□ -0.15
CMTM1-216ENST00000533078 USP17L15C9J2P7 530 aa14.12□□□□□ -0.15
CMTM1-216ENST00000533078 USP17L13C9JLJ4 530 aa14.12□□□□□ -0.15
CMTM1-216ENST00000533078 USP17L11C9JVI0 530 aa14.12□□□□□ -0.15
CMTM1-216ENST00000533078 USP17L18D6R9N7 530 aa14.12□□□□□ -0.15
CMTM1-216ENST00000533078 USP17L22D6RA61 530 aa14.12□□□□□ -0.15
CMTM1-216ENST00000533078 USP17L17D6RBQ6 530 aa14.12□□□□□ -0.15
CMTM1-216ENST00000533078 USP17L19D6RCP7 530 aa14.12□□□□□ -0.15
CMTM1-216ENST00000533078 USP17L20D6RJB6 530 aa14.12□□□□□ -0.15
CMTM1-216ENST00000533078 USP5P45974 858 aa14.12□□□□□ -0.15
CMTM1-216ENST00000533078 MDM2Q00987 491 aaPredicted RBP14.12□□□□□ -0.15
CMTM1-216ENST00000533078 USP17L24Q0WX57 530 aa14.12□□□□□ -0.15
CMTM1-216ENST00000533078 MAP2K5Q13163 448 aa14.12□□□□□ -0.15
CMTM1-216ENST00000533078 METTL16Q86W50 562 aaKnown RBP14.12□□□□□ -0.15
CMTM1-216ENST00000533078 EDC3Q96F86 508 aaKnown RBP14.12□□□□□ -0.15
CMTM1-216ENST00000533078 PORCNQ9H237 461 aa14.12□□□□□ -0.15
CMTM1-216ENST00000533078 GPR108Q9NPR9 543 aa14.12□□□□□ -0.15
CMTM1-216ENST00000533078 MTMR10Q9NXD2 777 aa14.12□□□□□ -0.15
CMTM1-216ENST00000533078 RBPJLQ9UBG7 517 aa14.12□□□□□ -0.15
CMTM1-216ENST00000533078 SAP30BPQ9UHR5 308 aaKnown RBP14.12□□□□□ -0.15
CMTM1-216ENST00000533078 GH2P01242 217 aa14.11□□□□□ -0.15
CMTM1-216ENST00000533078 COL6A1P12109 1028 aa14.11□□□□□ -0.15
CMTM1-216ENST00000533078 CNGA1P29973 690 aa14.11□□□□□ -0.15
CMTM1-216ENST00000533078 CCND3P30281 292 aaPredicted RBP14.11□□□□□ -0.15
CMTM1-216ENST00000533078 ATP2B2Q01814 1243 aa14.11□□□□□ -0.15
CMTM1-216ENST00000533078 ZYXQ15942 572 aaKnown RBP14.11□□□□□ -0.15
CMTM1-216ENST00000533078 MORN1Q5T089 497 aa14.11□□□□□ -0.15
CMTM1-216ENST00000533078 FRAT1Q92837 279 aaPredicted RBP14.11□□□□□ -0.15
CMTM1-216ENST00000533078 SENP6Q9GZR1 1112 aaPredicted RBP14.11□□□□□ -0.15
CMTM1-216ENST00000533078 CABP5Q9NP86 173 aa14.11□□□□□ -0.15
CMTM1-216ENST00000533078 PNMA6EA0A0J9YXQ4 647 aa14.1□□□□□ -0.15
CMTM1-216ENST00000533078 CYP7A1P22680 504 aa14.1□□□□□ -0.15
CMTM1-216ENST00000533078 RAB3GAP1Q15042 981 aa14.1□□□□□ -0.15
CMTM1-216ENST00000533078 CCL14Q16627 93 aa14.1□□□□□ -0.15
CMTM1-216ENST00000533078 LRRC26Q2I0M4 334 aa14.1□□□□□ -0.15
CMTM1-216ENST00000533078 Q3C1V9 767 aa14.1□□□□□ -0.15
CMTM1-216ENST00000533078 TNNI3KQ59H18 835 aa14.1□□□□□ -0.15
CMTM1-216ENST00000533078 LHX8Q68G74 356 aa14.1□□□□□ -0.15
CMTM1-216ENST00000533078 USP6NLQ92738 828 aa14.1□□□□□ -0.15
CMTM1-216ENST00000533078 DNAJC18Q9H819 358 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms