RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 PABPC4Q13310 644 aaKnown RBP eCLIP20.06■□□□□ 0.8
PKP3-209ENST00000533069 LRRFIP1Q32MZ4 808 aaKnown RBP20.06■□□□□ 0.8
PKP3-209ENST00000533069 DDX60LQ5H9U9 1706 aaKnown RBP20.06■□□□□ 0.8
PKP3-209ENST00000533069 TSHZ3Q63HK5 1081 aa20.06■□□□□ 0.8
PKP3-209ENST00000533069 SDR42E1Q8WUS8 393 aa20.06■□□□□ 0.8
PKP3-209ENST00000533069 PHIPQ8WWQ0 1821 aa20.05■□□□□ 0.8
PKP3-209ENST00000533069 ZFYP08048 801 aaPredicted RBP20.05■□□□□ 0.8
PKP3-209ENST00000533069 BCRP11274 1271 aa20.05■□□□□ 0.8
PKP3-209ENST00000533069 PLCD1P51178 756 aa20.05■□□□□ 0.8
PKP3-209ENST00000533069 HMGCS2P54868 508 aa20.05■□□□□ 0.8
PKP3-209ENST00000533069 BACE1P56817 501 aa20.05■□□□□ 0.8
PKP3-209ENST00000533069 JAG1P78504 1218 aa20.05■□□□□ 0.8
PKP3-209ENST00000533069 SMCR8Q8TEV9 937 aaPredicted RBP20.05■□□□□ 0.8
PKP3-209ENST00000533069 DDRGK1Q96HY6 314 aa20.05■□□□□ 0.8
PKP3-209ENST00000533069 C19orf81C9J6K1 198 aa20.04■□□□□ 0.8
PKP3-209ENST00000533069 GH2P01242 217 aa20.04■□□□□ 0.8
PKP3-209ENST00000533069 MX1P20591 662 aa20.04■□□□□ 0.8
PKP3-209ENST00000533069 RGS19P49795 217 aa20.04■□□□□ 0.8
PKP3-209ENST00000533069 PRMT2P55345 433 aa20.04■□□□□ 0.8
PKP3-209ENST00000533069 CAP1Q01518 475 aa20.04■□□□□ 0.8
PKP3-209ENST00000533069 GABPAQ06546 454 aa20.04■□□□□ 0.8
PKP3-209ENST00000533069 MTMR2Q13614 643 aa20.04■□□□□ 0.8
PKP3-209ENST00000533069 SLFNL1Q499Z3 407 aa20.04■□□□□ 0.8
PKP3-209ENST00000533069 CERKLQ49MI3 558 aaPredicted RBP20.04■□□□□ 0.8
PKP3-209ENST00000533069 TREML2Q5T2D2 321 aa20.04■□□□□ 0.8
PKP3-209ENST00000533069 AMOTL1Q8IY63 956 aa20.04■□□□□ 0.8
PKP3-209ENST00000533069 TMOD4Q9NZQ9 345 aa20.04■□□□□ 0.8
PKP3-209ENST00000533069 GTF3C3Q9Y5Q9 886 aa20.04■□□□□ 0.8
PKP3-209ENST00000533069 USP17L10C9JJH3 530 aa20.03■□□□□ 0.8
PKP3-209ENST00000533069 SHMT1P34896 483 aa20.03■□□□□ 0.8
PKP3-209ENST00000533069 ABCB5Q2M3G0 1257 aa20.03■□□□□ 0.8
PKP3-209ENST00000533069 ANKRD45Q5TZF3 282 aa20.03■□□□□ 0.8
PKP3-209ENST00000533069 PI4K2BQ8TCG2 481 aa20.03■□□□□ 0.8
PKP3-209ENST00000533069 PUS7LQ9H0K6 701 aaKnown RBP20.03■□□□□ 0.8
PKP3-209ENST00000533069 CABP5Q9NP86 173 aa20.03■□□□□ 0.8
PKP3-209ENST00000533069 SWAP70Q9UH65 585 aa20.03■□□□□ 0.8
PKP3-209ENST00000533069 NAV1Q8NEY1 1877 aa20.03■□□□□ 0.8
PKP3-209ENST00000533069 RNF113AO15541 343 aaKnown RBP20.02■□□□□ 0.8
PKP3-209ENST00000533069 PRKAB2O43741 272 aa20.02■□□□□ 0.8
PKP3-209ENST00000533069 CHGBP05060 677 aa20.02■□□□□ 0.8
PKP3-209ENST00000533069 OSBPP22059 807 aa20.02■□□□□ 0.8
PKP3-209ENST00000533069 IRX6P78412 446 aaPredicted RBP20.02■□□□□ 0.8
PKP3-209ENST00000533069 SHROOM1Q2M3G4 852 aaPredicted RBP20.02■□□□□ 0.8
PKP3-209ENST00000533069 OTUD7AQ8TE49 926 aaPredicted RBP20.02■□□□□ 0.8
PKP3-209ENST00000533069 APPBP2Q92624 585 aa20.02■□□□□ 0.8
PKP3-209ENST00000533069 ARHGAP39Q9C0H5 1083 aa20.02■□□□□ 0.8
PKP3-209ENST00000533069 RWDD1Q9H446 243 aaPredicted RBP20.02■□□□□ 0.8
PKP3-209ENST00000533069 SLC4A4Q9Y6R1 1079 aa20.02■□□□□ 0.8
PKP3-209ENST00000533069 ATAD5Q96QE3 1844 aa20.02■□□□□ 0.79
PKP3-209ENST00000533069 SALL3Q9BXA9 1300 aa20.02■□□□□ 0.79
PKP3-209ENST00000533069 LOC285556D6RIA3 1793 aa20.01■□□□□ 0.79
PKP3-209ENST00000533069 HOXD10P28358 340 aa20.01■□□□□ 0.79
PKP3-209ENST00000533069 PSMC4P43686 418 aa20.01■□□□□ 0.79
PKP3-209ENST00000533069 PPP4R2Q9NY27 417 aa20.01■□□□□ 0.79
PKP3-209ENST00000533069 MYH1P12882 1939 aa20.01■□□□□ 0.79
PKP3-209ENST00000533069 HTTP42858 3142 aa20.01■□□□□ 0.79
PKP3-209ENST00000533069 GCLCP48506 637 aaPredicted RBP20■□□□□ 0.79
PKP3-209ENST00000533069 FCGRTP55899 365 aa20■□□□□ 0.79
PKP3-209ENST00000533069 SOX10P56693 466 aa20■□□□□ 0.79
PKP3-209ENST00000533069 EXOC6Q8TAG9 804 aa20■□□□□ 0.79
PKP3-209ENST00000533069 ARMC5Q96C12 935 aa20■□□□□ 0.79
PKP3-209ENST00000533069 TRIM47Q96LD4 638 aa20■□□□□ 0.79
PKP3-209ENST00000533069 PTPRFP10586 1907 aa20■□□□□ 0.79
PKP3-209ENST00000533069 FMNL1O95466 1100 aaPredicted RBP19.99■□□□□ 0.79
PKP3-209ENST00000533069 CYP2D6P10635 497 aa19.99■□□□□ 0.79
PKP3-209ENST00000533069 HOXA7P31268 230 aaPredicted RBP19.99■□□□□ 0.79
PKP3-209ENST00000533069 USP14P54578 494 aa19.99■□□□□ 0.79
PKP3-209ENST00000533069 RAB3GAP1Q15042 981 aa19.99■□□□□ 0.79
PKP3-209ENST00000533069 C12orf60Q5U649 245 aa19.99■□□□□ 0.79
PKP3-209ENST00000533069 GIMAP6Q6P9H5 292 aa19.99■□□□□ 0.79
PKP3-209ENST00000533069 USP17L2Q6R6M4 530 aa19.99■□□□□ 0.79
PKP3-209ENST00000533069 STRBPQ96SI9 672 aaKnown RBP19.99■□□□□ 0.79
PKP3-209ENST00000533069 FEZ1Q99689 392 aa19.99■□□□□ 0.79
PKP3-209ENST00000533069 ASCC2Q9H1I8 757 aaPredicted RBP19.99■□□□□ 0.79
PKP3-209ENST00000533069 ARPP21Q9UBL0 812 aaPredicted RBP19.99■□□□□ 0.79
PKP3-209ENST00000533069 STAP2Q9UGK3 403 aa19.99■□□□□ 0.79
PKP3-209ENST00000533069 PTCH2Q9Y6C5 1203 aa19.99■□□□□ 0.79
PKP3-209ENST00000533069 GNAT2P19087 354 aa19.98■□□□□ 0.79
PKP3-209ENST00000533069 IRX3P78415 501 aaPredicted RBP19.98■□□□□ 0.79
PKP3-209ENST00000533069 MLLT1Q03111 559 aaPredicted RBP19.98■□□□□ 0.79
PKP3-209ENST00000533069 FAM110CQ1W6H9 321 aa19.98■□□□□ 0.79
PKP3-209ENST00000533069 SLC9C1Q4G0N8 1177 aa19.98■□□□□ 0.79
PKP3-209ENST00000533069 NBPF11Q86T75 865 aa19.98■□□□□ 0.79
PKP3-209ENST00000533069 SMC5Q8IY18 1101 aa19.98■□□□□ 0.79
PKP3-209ENST00000533069 OSBP2Q969R2 916 aa19.98■□□□□ 0.79
PKP3-209ENST00000533069 C12orf42Q96LP6 360 aa19.98■□□□□ 0.79
PKP3-209ENST00000533069 FSD1Q9BTV5 496 aa19.98■□□□□ 0.79
PKP3-209ENST00000533069 KIAA1683Q9H0B3 1180 aa19.98■□□□□ 0.79
PKP3-209ENST00000533069 SRRDQ9UH36 339 aa19.98■□□□□ 0.79
PKP3-209ENST00000533069 USP17L12C9JPN9 530 aa19.97■□□□□ 0.79
PKP3-209ENST00000533069 USP17L21D6R901 530 aa19.97■□□□□ 0.79
PKP3-209ENST00000533069 CTGFP29279 349 aa19.97■□□□□ 0.79
PKP3-209ENST00000533069 EVX2Q03828 476 aa19.97■□□□□ 0.79
PKP3-209ENST00000533069 MPHOSPH10O00566 681 aaKnown RBP19.96■□□□□ 0.79
PKP3-209ENST00000533069 GPAA1O43292 621 aa19.96■□□□□ 0.79
PKP3-209ENST00000533069 CTR9Q6PD62 1173 aa19.96■□□□□ 0.79
PKP3-209ENST00000533069 TMEM179Q6ZVK1 233 aa19.96■□□□□ 0.79
PKP3-209ENST00000533069 C16orf86Q6ZW13 317 aa19.96■□□□□ 0.79
PKP3-209ENST00000533069 ANKRD13CQ8N6S4 541 aa19.96■□□□□ 0.79
PKP3-209ENST00000533069 SLC44A5Q8NCS7 719 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms