RNA–Protein interactions for RNA: ENST00000532800.1

RPUSD4-207, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 2

Gene RPUSD4, Length 1,030 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-207ENST00000532800 PABPC4Q13310 644 aaKnown RBP eCLIP20.88■□□□□ 0.93
RPUSD4-207ENST00000532800 MIGA1Q8NAN2 632 aa20.88■□□□□ 0.93
RPUSD4-207ENST00000532800 PANK1Q8TE04 598 aa20.88■□□□□ 0.93
RPUSD4-207ENST00000532800 EXOC6BQ9Y2D4 811 aa20.88■□□□□ 0.93
RPUSD4-207ENST00000532800 TRIOBPQ9H2D6 2365 aa20.87■□□□□ 0.93
RPUSD4-207ENST00000532800 PEX10O60683 326 aa20.87■□□□□ 0.93
RPUSD4-207ENST00000532800 BACE1P56817 501 aa20.87■□□□□ 0.93
RPUSD4-207ENST00000532800 FOXP4Q8IVH2 680 aaPredicted RBP20.87■□□□□ 0.93
RPUSD4-207ENST00000532800 DEFB118Q96PH6 123 aa20.87■□□□□ 0.93
RPUSD4-207ENST00000532800 TRIM34Q9BYJ4 488 aa20.87■□□□□ 0.93
RPUSD4-207ENST00000532800 ANTXR1Q9H6X2 564 aa20.87■□□□□ 0.93
RPUSD4-207ENST00000532800 ZBTB21Q9ULJ3 1066 aa20.87■□□□□ 0.93
RPUSD4-207ENST00000532800 MAGEB6Q8N7X4 407 aa20.86■□□□□ 0.93
RPUSD4-207ENST00000532800 PAK6Q9NQU5 681 aaPredicted RBP20.86■□□□□ 0.93
RPUSD4-207ENST00000532800 TMOD4Q9NZQ9 345 aa20.86■□□□□ 0.93
RPUSD4-207ENST00000532800 IGSF3O75054 1194 aa20.85■□□□□ 0.93
RPUSD4-207ENST00000532800 HLA-DOAP06340 250 aa20.85■□□□□ 0.93
RPUSD4-207ENST00000532800 IRX3P78415 501 aaPredicted RBP20.85■□□□□ 0.93
RPUSD4-207ENST00000532800 CHRDL2Q6WN34 429 aa20.85■□□□□ 0.93
RPUSD4-207ENST00000532800 AACSQ86V21 672 aa20.85■□□□□ 0.93
RPUSD4-207ENST00000532800 HTATIP2Q9BUP3 242 aa20.85■□□□□ 0.93
RPUSD4-207ENST00000532800 MORF4L1Q9UBU8 362 aa20.85■□□□□ 0.93
RPUSD4-207ENST00000532800 RANBP2P49792 3224 aaKnown RBP20.84■□□□□ 0.93
RPUSD4-207ENST00000532800 ZBED9Q6R2W3 1325 aa20.84■□□□□ 0.93
RPUSD4-207ENST00000532800 P2RX7Q99572 595 aaKnown RBP20.84■□□□□ 0.93
RPUSD4-207ENST00000532800 TXNRD2Q9NNW7 524 aa20.84■□□□□ 0.93
RPUSD4-207ENST00000532800 GJD2Q9UKL4 321 aa20.84■□□□□ 0.93
RPUSD4-207ENST00000532800 DDX60LQ5H9U9 1706 aaKnown RBP20.84■□□□□ 0.93
RPUSD4-207ENST00000532800 USP17L10C9JJH3 530 aa20.83■□□□□ 0.93
RPUSD4-207ENST00000532800 TFRCP02786 760 aaKnown RBP20.83■□□□□ 0.93
RPUSD4-207ENST00000532800 HOXA7P31268 230 aaPredicted RBP20.83■□□□□ 0.93
RPUSD4-207ENST00000532800 USP5P45974 858 aa20.83■□□□□ 0.93
RPUSD4-207ENST00000532800 TRIM32Q13049 653 aa20.83■□□□□ 0.93
RPUSD4-207ENST00000532800 DIEXFQ68CQ4 756 aaKnown RBP20.83■□□□□ 0.93
RPUSD4-207ENST00000532800 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.83■□□□□ 0.93
RPUSD4-207ENST00000532800 IL1RAPL2Q9NP60 686 aa20.83■□□□□ 0.93
RPUSD4-207ENST00000532800 ALPK3Q96L96 1907 aa20.82■□□□□ 0.92
RPUSD4-207ENST00000532800 NAV1Q8NEY1 1877 aa20.82■□□□□ 0.92
RPUSD4-207ENST00000532800 C19orf81C9J6K1 198 aa20.82■□□□□ 0.92
RPUSD4-207ENST00000532800 GH2P01242 217 aa20.82■□□□□ 0.92
RPUSD4-207ENST00000532800 HERVK_113P62684 666 aa20.82■□□□□ 0.92
RPUSD4-207ENST00000532800 ERC1Q8IUD2 1116 aa20.82■□□□□ 0.92
RPUSD4-207ENST00000532800 CRISPLD2Q9H0B8 497 aa20.82■□□□□ 0.92
RPUSD4-207ENST00000532800 GINM1Q9NU53 330 aa20.82■□□□□ 0.92
RPUSD4-207ENST00000532800 HMGCRP04035 888 aa20.81■□□□□ 0.92
RPUSD4-207ENST00000532800 MAP3K12Q12852 859 aa20.81■□□□□ 0.92
RPUSD4-207ENST00000532800 EMILIN3Q9NT22 766 aa20.81■□□□□ 0.92
RPUSD4-207ENST00000532800 RBM27Q9P2N5 1060 aaKnown RBP20.81■□□□□ 0.92
RPUSD4-207ENST00000532800 TATDN1Q6P1N9 297 aa20.8■□□□□ 0.92
RPUSD4-207ENST00000532800 POTEEQ6S8J3 1075 aa20.8■□□□□ 0.92
RPUSD4-207ENST00000532800 DIS3LQ8TF46 1054 aaKnown RBP20.8■□□□□ 0.92
RPUSD4-207ENST00000532800 TRIB2Q92519 343 aa20.8■□□□□ 0.92
RPUSD4-207ENST00000532800 SZT2Q5T011 3432 aa20.79■□□□□ 0.92
RPUSD4-207ENST00000532800 CYP2B6P20813 491 aa20.79■□□□□ 0.92
RPUSD4-207ENST00000532800 ZYXQ15942 572 aaKnown RBP20.79■□□□□ 0.92
RPUSD4-207ENST00000532800 CERS3Q8IU89 383 aa20.79■□□□□ 0.92
RPUSD4-207ENST00000532800 GPRC5AQ8NFJ5 357 aa20.79■□□□□ 0.92
RPUSD4-207ENST00000532800 RHPN1Q8TCX5 695 aa20.79■□□□□ 0.92
RPUSD4-207ENST00000532800 PAWRQ96IZ0 340 aaKnown RBP20.79■□□□□ 0.92
RPUSD4-207ENST00000532800 RIOK1Q9BRS2 568 aaKnown RBP20.79■□□□□ 0.92
RPUSD4-207ENST00000532800 RBPJLQ9UBG7 517 aa20.79■□□□□ 0.92
RPUSD4-207ENST00000532800 SERPINB13Q9UIV8 391 aa20.79■□□□□ 0.92
RPUSD4-207ENST00000532800 APBB1O00213 710 aa20.78■□□□□ 0.92
RPUSD4-207ENST00000532800 Q3C1V9 767 aa20.78■□□□□ 0.92
RPUSD4-207ENST00000532800 USP17L2Q6R6M4 530 aa20.78■□□□□ 0.92
RPUSD4-207ENST00000532800 PAGR1Q9BTK6 254 aa20.78■□□□□ 0.92
RPUSD4-207ENST00000532800 EHD4Q9H223 541 aa20.78■□□□□ 0.92
RPUSD4-207ENST00000532800 PORCNQ9H237 461 aa20.78■□□□□ 0.92
RPUSD4-207ENST00000532800 PLCD1P51178 756 aa20.77■□□□□ 0.92
RPUSD4-207ENST00000532800 ERVK-9P63128 1117 aa20.77■□□□□ 0.92
RPUSD4-207ENST00000532800 ERVK-24P63145 666 aa20.77■□□□□ 0.92
RPUSD4-207ENST00000532800 EVX2Q03828 476 aa20.77■□□□□ 0.92
RPUSD4-207ENST00000532800 FEZ1Q99689 392 aa20.77■□□□□ 0.92
RPUSD4-207ENST00000532800 PRO3102Q9H379 93 aa20.77■□□□□ 0.92
RPUSD4-207ENST00000532800 NR2E3Q9Y5X4 410 aa20.77■□□□□ 0.92
RPUSD4-207ENST00000532800 RPTORQ8N122 1335 aa20.77■□□□□ 0.91
RPUSD4-207ENST00000532800 EVI5O60447 810 aa20.76■□□□□ 0.91
RPUSD4-207ENST00000532800 PDE6AP16499 860 aa20.76■□□□□ 0.91
RPUSD4-207ENST00000532800 RAB3GAP1Q15042 981 aa20.76■□□□□ 0.91
RPUSD4-207ENST00000532800 CERKLQ49MI3 558 aaPredicted RBP20.76■□□□□ 0.91
RPUSD4-207ENST00000532800 HSP90AB4PQ58FF6 505 aa20.76■□□□□ 0.91
RPUSD4-207ENST00000532800 TTC6Q86TZ1 520 aa20.76■□□□□ 0.91
RPUSD4-207ENST00000532800 SIRT2Q8IXJ6 389 aa20.76■□□□□ 0.91
RPUSD4-207ENST00000532800 ACER1Q8TDN7 264 aa20.76■□□□□ 0.91
RPUSD4-207ENST00000532800 SOCS4Q8WXH5 440 aa20.76■□□□□ 0.91
RPUSD4-207ENST00000532800 C12orf42Q96LP6 360 aa20.76■□□□□ 0.91
RPUSD4-207ENST00000532800 NUDT12Q9BQG2 462 aa20.76■□□□□ 0.91
RPUSD4-207ENST00000532800 BCL11AQ9H165 835 aa20.76■□□□□ 0.91
RPUSD4-207ENST00000532800 HMX1Q9NP08 348 aaPredicted RBP20.76■□□□□ 0.91
RPUSD4-207ENST00000532800 MAGEB6P1A0A0J9YX57 407 aa20.75■□□□□ 0.91
RPUSD4-207ENST00000532800 CAPN2P17655 700 aa20.75■□□□□ 0.91
RPUSD4-207ENST00000532800 SHMT1P34896 483 aa20.75■□□□□ 0.91
RPUSD4-207ENST00000532800 ABCB5Q2M3G0 1257 aa20.75■□□□□ 0.91
RPUSD4-207ENST00000532800 TMED8Q6PL24 325 aaPredicted RBP20.75■□□□□ 0.91
RPUSD4-207ENST00000532800 DNAJC2Q99543 621 aaKnown RBP20.75■□□□□ 0.91
RPUSD4-207ENST00000532800 COG6Q9Y2V7 657 aa20.75■□□□□ 0.91
RPUSD4-207ENST00000532800 GOLIM4O00461 696 aa20.74■□□□□ 0.91
RPUSD4-207ENST00000532800 CNMDO75829 334 aa20.74■□□□□ 0.91
RPUSD4-207ENST00000532800 PRKAR2AP13861 404 aaKnown RBP20.74■□□□□ 0.91
RPUSD4-207ENST00000532800 MAPK4P31152 587 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms