RNA–Protein interactions for RNA: ENST00000532737.1

USP48-214, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 680 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-214ENST00000532737 OTUD5Q96G74 571 aa29.65■■■□□ 2.34
USP48-214ENST00000532737 NAPBQ9H115 298 aa29.65■■■□□ 2.34
USP48-214ENST00000532737 ZBTB48P10074 688 aaPredicted RBP29.64■■■□□ 2.34
USP48-214ENST00000532737 MFAP1P55081 439 aaKnown RBP29.64■■■□□ 2.34
USP48-214ENST00000532737 SHROOM1Q2M3G4 852 aaPredicted RBP29.64■■■□□ 2.34
USP48-214ENST00000532737 PICK1Q9NRD5 415 aa29.64■■■□□ 2.34
USP48-214ENST00000532737 FRMD4AQ9P2Q2 1039 aaPredicted RBP29.64■■■□□ 2.34
USP48-214ENST00000532737 ALX1Q15699 326 aa29.63■■■□□ 2.33
USP48-214ENST00000532737 GDF11O95390 407 aa29.62■■■□□ 2.33
USP48-214ENST00000532737 PTPRAP18433 802 aa29.62■■■□□ 2.33
USP48-214ENST00000532737 PPATQ06203 517 aa29.62■■■□□ 2.33
USP48-214ENST00000532737 C16orf86Q6ZW13 317 aa29.62■■■□□ 2.33
USP48-214ENST00000532737 CCDC84Q86UT8 332 aaPredicted RBP29.62■■■□□ 2.33
USP48-214ENST00000532737 RUFY2Q8WXA3 655 aa29.62■■■□□ 2.33
USP48-214ENST00000532737 SWAP70Q9UH65 585 aa29.62■■■□□ 2.33
USP48-214ENST00000532737 TAOK2Q9UL54 1235 aa29.62■■■□□ 2.33
USP48-214ENST00000532737 FGAP02671 866 aa29.61■■■□□ 2.33
USP48-214ENST00000532737 CDK8P49336 464 aa29.61■■■□□ 2.33
USP48-214ENST00000532737 PPIL2Q13356 520 aa29.61■■■□□ 2.33
USP48-214ENST00000532737 IRF6O14896 467 aa29.6■■■□□ 2.33
USP48-214ENST00000532737 CERKLQ49MI3 558 aaPredicted RBP29.6■■■□□ 2.33
USP48-214ENST00000532737 STK11IPQ8N1F8 1099 aa29.6■■■□□ 2.33
USP48-214ENST00000532737 ZHX2Q9Y6X8 837 aa29.6■■■□□ 2.33
USP48-214ENST00000532737 RAD50Q92878 1312 aa29.6■■■□□ 2.33
USP48-214ENST00000532737 ZBTB21Q9ULJ3 1066 aa29.59■■■□□ 2.33
USP48-214ENST00000532737 SGSM2O43147 1006 aa29.58■■■□□ 2.33
USP48-214ENST00000532737 ASNSP08243 561 aa29.58■■■□□ 2.33
USP48-214ENST00000532737 PPARAQ07869 468 aa29.58■■■□□ 2.33
USP48-214ENST00000532737 MS4A4AQ96JQ5 239 aa29.58■■■□□ 2.33
USP48-214ENST00000532737 ROBO3Q96MS0 1386 aa29.58■■■□□ 2.33
USP48-214ENST00000532737 GH2P01242 217 aa29.57■■■□□ 2.32
USP48-214ENST00000532737 ABCB5Q2M3G0 1257 aa29.57■■■□□ 2.32
USP48-214ENST00000532737 GINM1Q9NU53 330 aa29.57■■■□□ 2.32
USP48-214ENST00000532737 MANSC4A6NHS7 340 aaPredicted RBP29.56■■■□□ 2.32
USP48-214ENST00000532737 DSCC1Q9BVC3 393 aa29.56■■■□□ 2.32
USP48-214ENST00000532737 KCNH4Q9UQ05 1017 aa29.56■■■□□ 2.32
USP48-214ENST00000532737 AFG3L2Q9Y4W6 797 aa29.56■■■□□ 2.32
USP48-214ENST00000532737 DOCK1Q14185 1865 aa29.56■■■□□ 2.32
USP48-214ENST00000532737 ZMYM6O95789 1325 aa29.55■■■□□ 2.32
USP48-214ENST00000532737 USP17L5A8MUK1 530 aa29.55■■■□□ 2.32
USP48-214ENST00000532737 TM4SF4P48230 202 aa29.55■■■□□ 2.32
USP48-214ENST00000532737 CDC45O75419 566 aa29.54■■■□□ 2.32
USP48-214ENST00000532737 AKR1B1P15121 316 aa29.54■■■□□ 2.32
USP48-214ENST00000532737 GUCY1A2P33402 732 aa29.54■■■□□ 2.32
USP48-214ENST00000532737 GTF2A2P52657 109 aa29.54■■■□□ 2.32
USP48-214ENST00000532737 CTDSPL2Q05D32 466 aa29.54■■■□□ 2.32
USP48-214ENST00000532737 REM2Q8IYK8 340 aaPredicted RBP29.54■■■□□ 2.32
USP48-214ENST00000532737 BRI3BPQ8WY22 251 aa29.54■■■□□ 2.32
USP48-214ENST00000532737 ESYT1Q9BSJ8 1104 aa29.54■■■□□ 2.32
USP48-214ENST00000532737 ANAPC4Q9UJX5 808 aa29.54■■■□□ 2.32
USP48-214ENST00000532737 TESPA1A2RU30 521 aaPredicted RBP29.53■■■□□ 2.32
USP48-214ENST00000532737 CXCL11O14625 94 aa29.53■■■□□ 2.32
USP48-214ENST00000532737 PTH1RQ03431 593 aa29.53■■■□□ 2.32
USP48-214ENST00000532737 SREBF2Q12772 1141 aa29.53■■■□□ 2.32
USP48-214ENST00000532737 SNAPC2Q13487 334 aa29.53■■■□□ 2.32
USP48-214ENST00000532737 MKNK2Q9HBH9 465 aa29.53■■■□□ 2.32
USP48-214ENST00000532737 CABP5Q9NP86 173 aa29.53■■■□□ 2.32
USP48-214ENST00000532737 TACC3Q9Y6A5 838 aa29.53■■■□□ 2.32
USP48-214ENST00000532737 CCL15-CCL14A0A0B4J2E2 113 aa29.52■■■□□ 2.32
USP48-214ENST00000532737 MPHOSPH10O00566 681 aaKnown RBP29.52■■■□□ 2.32
USP48-214ENST00000532737 PRDM1O75626 825 aa29.52■■■□□ 2.32
USP48-214ENST00000532737 SLC3A2P08195 630 aaKnown RBP29.52■■■□□ 2.32
USP48-214ENST00000532737 RASA1P20936 1047 aa29.52■■■□□ 2.32
USP48-214ENST00000532737 INHBEP58166 350 aa29.52■■■□□ 2.32
USP48-214ENST00000532737 SPP2Q13103 211 aa29.52■■■□□ 2.32
USP48-214ENST00000532737 CCL15Q16663 113 aa29.52■■■□□ 2.32
USP48-214ENST00000532737 CCDC17Q96LX7 622 aa29.52■■■□□ 2.32
USP48-214ENST00000532737 WDR18Q9BV38 432 aa29.52■■■□□ 2.32
USP48-214ENST00000532737 MCOLN1Q9GZU1 580 aa29.52■■■□□ 2.32
USP48-214ENST00000532737 INCENPQ9NQS7 918 aa29.52■■■□□ 2.32
USP48-214ENST00000532737 TRIM75PA6NK02 468 aa29.51■■■□□ 2.31
USP48-214ENST00000532737 CETPP11597 493 aa29.51■■■□□ 2.31
USP48-214ENST00000532737 HAND2P61296 217 aa29.51■■■□□ 2.31
USP48-214ENST00000532737 SEPT2Q15019 361 aa29.51■■■□□ 2.31
USP48-214ENST00000532737 RAB3GAP1Q15042 981 aa29.51■■■□□ 2.31
USP48-214ENST00000532737 ZNF280CQ8ND82 737 aa29.51■■■□□ 2.31
USP48-214ENST00000532737 PTPN18Q99952 460 aa29.51■■■□□ 2.31
USP48-214ENST00000532737 LAMB1P07942 1786 aa29.5■■■□□ 2.31
USP48-214ENST00000532737 TBC1D2Q9BYX2 928 aa29.5■■■□□ 2.31
USP48-214ENST00000532737 NBPF3Q9H094 633 aa29.5■■■□□ 2.31
USP48-214ENST00000532737 AS3MTQ9HBK9 375 aa29.5■■■□□ 2.31
USP48-214ENST00000532737 DDX52Q9Y2R4 599 aaKnown RBP eCLIP29.5■■■□□ 2.31
USP48-214ENST00000532737 CCDC85CA6NKD9 419 aa29.49■■■□□ 2.31
USP48-214ENST00000532737 IGF2BP3O00425 579 aaKnown RBP eCLIP29.49■■■□□ 2.31
USP48-214ENST00000532737 PDE4BQ07343 736 aa29.49■■■□□ 2.31
USP48-214ENST00000532737 MOGSQ13724 837 aa29.49■■■□□ 2.31
USP48-214ENST00000532737 TMEM179Q6ZVK1 233 aa29.49■■■□□ 2.31
USP48-214ENST00000532737 IFNL1Q8IU54 200 aa29.49■■■□□ 2.31
USP48-214ENST00000532737 ZNF287Q9HBT7 754 aa29.49■■■□□ 2.31
USP48-214ENST00000532737 SAGE1Q9NXZ1 904 aa29.49■■■□□ 2.31
USP48-214ENST00000532737 ATAD5Q96QE3 1844 aa29.49■■■□□ 2.31
USP48-214ENST00000532737 GNL3Q9BVP2 549 aaKnown RBP eCLIP29.48■■■□□ 2.31
USP48-214ENST00000532737 CTNNA3Q9UI47 895 aa29.48■■■□□ 2.31
USP48-214ENST00000532737 PHIPQ8WWQ0 1821 aa29.48■■■□□ 2.31
USP48-214ENST00000532737 A0A0G2JLL6 359 aaPredicted RBP29.47■■■□□ 2.31
USP48-214ENST00000532737 CASC1Q6TDU7 716 aa29.47■■■□□ 2.31
USP48-214ENST00000532737 PRRT2Q7Z6L0 340 aaPredicted RBP29.47■■■□□ 2.31
USP48-214ENST00000532737 ZNF444Q8N0Y2 327 aaPredicted RBP29.47■■■□□ 2.31
USP48-214ENST00000532737 RNF186Q9NXI6 227 aa29.47■■■□□ 2.31
USP48-214ENST00000532737 ZNF213O14771 459 aa29.46■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms