RNA–Protein interactions for RNA: ENST00000532475.1

NUP98-219, Transcript of nucleoporin 98, humanhuman

TSL 4

Gene NUP98, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-219ENST00000532475 GJD2Q9UKL4 321 aa10.35□□□□□ -0.75
NUP98-219ENST00000532475 IVNS1ABPQ9Y6Y0 642 aa10.35□□□□□ -0.75
NUP98-219ENST00000532475 TRIM75PA6NK02 468 aa10.34□□□□□ -0.75
NUP98-219ENST00000532475 PRDX5P30044 214 aa10.34□□□□□ -0.75
NUP98-219ENST00000532475 ABL2P42684 1182 aa10.34□□□□□ -0.75
NUP98-219ENST00000532475 EXOSC9Q06265 439 aaKnown RBP10.34□□□□□ -0.75
NUP98-219ENST00000532475 TMEM259Q4ZIN3 620 aa10.34□□□□□ -0.75
NUP98-219ENST00000532475 TREML2Q5T2D2 321 aa10.34□□□□□ -0.75
NUP98-219ENST00000532475 SLC4A10Q6U841 1118 aa10.34□□□□□ -0.75
NUP98-219ENST00000532475 SCYL3Q8IZE3 742 aa10.34□□□□□ -0.75
NUP98-219ENST00000532475 COA7Q96BR5 231 aa10.34□□□□□ -0.75
NUP98-219ENST00000532475 BICC1Q9H694 974 aaKnown RBP10.34□□□□□ -0.75
NUP98-219ENST00000532475 C11orf49Q9H6J7 331 aa10.34□□□□□ -0.75
NUP98-219ENST00000532475 SUGT1Q9Y2Z0 365 aa10.34□□□□□ -0.75
NUP98-219ENST00000532475 ALPK3Q96L96 1907 aa10.34□□□□□ -0.75
NUP98-219ENST00000532475 RPAP1Q9BWH6 1393 aaPredicted RBP10.34□□□□□ -0.75
NUP98-219ENST00000532475 A0A1B0GUL6 1792 aa10.34□□□□□ -0.75
NUP98-219ENST00000532475 TBC1D12O60347 775 aa10.33□□□□□ -0.76
NUP98-219ENST00000532475 PEX10O60683 326 aa10.33□□□□□ -0.76
NUP98-219ENST00000532475 EIF5BO60841 1220 aaKnown RBP10.33□□□□□ -0.76
NUP98-219ENST00000532475 CAPN2P17655 700 aa10.33□□□□□ -0.76
NUP98-219ENST00000532475 FGFR2P21802 821 aa10.33□□□□□ -0.76
NUP98-219ENST00000532475 ANKRD44Q8N8A2 993 aa10.33□□□□□ -0.76
NUP98-219ENST00000532475 ANKLE1Q8NAG6 615 aa10.33□□□□□ -0.76
NUP98-219ENST00000532475 HMX1Q9NP08 348 aaPredicted RBP10.33□□□□□ -0.76
NUP98-219ENST00000532475 PICK1Q9NRD5 415 aa10.33□□□□□ -0.76
NUP98-219ENST00000532475 OGDHLQ9ULD0 1010 aa10.33□□□□□ -0.76
NUP98-219ENST00000532475 SLC45A1Q9Y2W3 748 aa10.33□□□□□ -0.76
NUP98-219ENST00000532475 SALL2Q9Y467 1007 aaPredicted RBP10.33□□□□□ -0.76
NUP98-219ENST00000532475 PFASO15067 1338 aa10.33□□□□□ -0.76
NUP98-219ENST00000532475 RPTORQ8N122 1335 aa10.33□□□□□ -0.76
NUP98-219ENST00000532475 FANCIQ9NVI1 1328 aa10.33□□□□□ -0.76
NUP98-219ENST00000532475 ATRNL1Q5VV63 1379 aa10.32□□□□□ -0.76
NUP98-219ENST00000532475 DDTLA6NHG4 134 aaPredicted RBP10.32□□□□□ -0.76
NUP98-219ENST00000532475 HMGCRP04035 888 aa10.32□□□□□ -0.76
NUP98-219ENST00000532475 RGS3P49796 1198 aa10.32□□□□□ -0.76
NUP98-219ENST00000532475 MAP3K10Q02779 954 aa10.32□□□□□ -0.76
NUP98-219ENST00000532475 RABL6Q3YEC7 729 aaPredicted RBP10.32□□□□□ -0.76
NUP98-219ENST00000532475 MYSM1Q5VVJ2 828 aa10.32□□□□□ -0.76
NUP98-219ENST00000532475 WDR66Q8TBY9 1149 aa10.32□□□□□ -0.76
NUP98-219ENST00000532475 DDX12PQ92771 950 aa10.32□□□□□ -0.76
NUP98-219ENST00000532475 SRCIN1Q9C0H9 1055 aa10.32□□□□□ -0.76
NUP98-219ENST00000532475 MAST3O60307 1309 aa10.32□□□□□ -0.76
NUP98-219ENST00000532475 ALDH1L1O75891 902 aa10.31□□□□□ -0.76
NUP98-219ENST00000532475 IFIT1P09914 478 aaKnown RBP10.31□□□□□ -0.76
NUP98-219ENST00000532475 TRIB2Q92519 343 aa10.31□□□□□ -0.76
NUP98-219ENST00000532475 DDX4Q9NQI0 724 aaKnown RBP10.31□□□□□ -0.76
NUP98-219ENST00000532475 AGTPBP1Q9UPW5 1226 aa10.31□□□□□ -0.76
NUP98-219ENST00000532475 LRRFIP2Q9Y608 721 aaKnown RBP10.31□□□□□ -0.76
NUP98-219ENST00000532475 AK9Q5TCS8 1911 aa10.31□□□□□ -0.76
NUP98-219ENST00000532475 MGAMO43451 1857 aa10.3□□□□□ -0.76
NUP98-219ENST00000532475 FAM196BA6NMK8 535 aa10.3□□□□□ -0.76
NUP98-219ENST00000532475 POM121CA8CG34 1229 aa10.3□□□□□ -0.76
NUP98-219ENST00000532475 CTNND1O60716 968 aaKnown RBP10.3□□□□□ -0.76
NUP98-219ENST00000532475 CYP2B6P20813 491 aa10.3□□□□□ -0.76
NUP98-219ENST00000532475 ZEB1P37275 1124 aaPredicted RBP10.3□□□□□ -0.76
NUP98-219ENST00000532475 SPP2Q13103 211 aa10.3□□□□□ -0.76
NUP98-219ENST00000532475 PUM3Q15397 648 aaKnown RBP10.3□□□□□ -0.76
NUP98-219ENST00000532475 FAM110CQ1W6H9 321 aa10.3□□□□□ -0.76
NUP98-219ENST00000532475 LRRC26Q2I0M4 334 aa10.3□□□□□ -0.76
NUP98-219ENST00000532475 ZSCAN29Q8IWY8 852 aaPredicted RBP10.3□□□□□ -0.76
NUP98-219ENST00000532475 PLPP6Q8IY26 295 aa10.3□□□□□ -0.76
NUP98-219ENST00000532475 UTYO14607 1347 aa10.3□□□□□ -0.76
NUP98-219ENST00000532475 IL16Q14005 1332 aa10.3□□□□□ -0.76
NUP98-219ENST00000532475 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.29□□□□□ -0.76
NUP98-219ENST00000532475 LDHBP07195 334 aaKnown RBP10.29□□□□□ -0.76
NUP98-219ENST00000532475 COL6A1P12109 1028 aa10.29□□□□□ -0.76
NUP98-219ENST00000532475 PRKAR2AP13861 404 aaKnown RBP10.29□□□□□ -0.76
NUP98-219ENST00000532475 RRP1BQ14684 758 aaKnown RBP10.29□□□□□ -0.76
NUP98-219ENST00000532475 LHX8Q68G74 356 aa10.29□□□□□ -0.76
NUP98-219ENST00000532475 IDI2Q9BXS1 227 aa10.29□□□□□ -0.76
NUP98-219ENST00000532475 PRDM6Q9NQX0 595 aa10.29□□□□□ -0.76
NUP98-219ENST00000532475 ENTPD3O75355 529 aa10.28□□□□□ -0.76
NUP98-219ENST00000532475 RFX1P22670 979 aa10.28□□□□□ -0.76
NUP98-219ENST00000532475 RFX5P48382 616 aaPredicted RBP10.28□□□□□ -0.76
NUP98-219ENST00000532475 PICALMQ13492 652 aa10.28□□□□□ -0.76
NUP98-219ENST00000532475 MAP3K21Q5TCX8 1036 aa10.28□□□□□ -0.76
NUP98-219ENST00000532475 FAM109BQ6ICB4 259 aaPredicted RBP10.28□□□□□ -0.76
NUP98-219ENST00000532475 ATG9AQ7Z3C6 839 aa10.28□□□□□ -0.76
NUP98-219ENST00000532475 LPIN2Q92539 896 aa10.28□□□□□ -0.76
NUP98-219ENST00000532475 CDX2Q99626 313 aaPredicted RBP10.28□□□□□ -0.76
NUP98-219ENST00000532475 ASCC2Q9H1I8 757 aaPredicted RBP10.28□□□□□ -0.76
NUP98-219ENST00000532475 EYA2O00167 538 aa10.27□□□□□ -0.77
NUP98-219ENST00000532475 SLC5A1P13866 664 aa10.27□□□□□ -0.77
NUP98-219ENST00000532475 CCND3P30281 292 aaPredicted RBP10.27□□□□□ -0.77
NUP98-219ENST00000532475 GCLCP48506 637 aaPredicted RBP10.27□□□□□ -0.77
NUP98-219ENST00000532475 HMGCS2P54868 508 aa10.27□□□□□ -0.77
NUP98-219ENST00000532475 CACNB2Q08289 660 aaPredicted RBP10.27□□□□□ -0.77
NUP98-219ENST00000532475 CCL14Q16627 93 aa10.27□□□□□ -0.77
NUP98-219ENST00000532475 Q3C1V9 767 aa10.27□□□□□ -0.77
NUP98-219ENST00000532475 USP44Q9H0E7 712 aa10.27□□□□□ -0.77
NUP98-219ENST00000532475 TXNRD2Q9NNW7 524 aa10.27□□□□□ -0.77
NUP98-219ENST00000532475 FAM217BQ9NTX9 383 aaPredicted RBP10.27□□□□□ -0.77
NUP98-219ENST00000532475 KIF16BQ96L93 1317 aa10.27□□□□□ -0.77
NUP98-219ENST00000532475 PHKA1P46020 1223 aa10.26□□□□□ -0.77
NUP98-219ENST00000532475 POTEEQ6S8J3 1075 aa10.26□□□□□ -0.77
NUP98-219ENST00000532475 WDR63Q8IWG1 891 aa10.26□□□□□ -0.77
NUP98-219ENST00000532475 ZNF280CQ8ND82 737 aa10.26□□□□□ -0.77
NUP98-219ENST00000532475 P2RX7Q99572 595 aaKnown RBP10.26□□□□□ -0.77
NUP98-219ENST00000532475 SEMA6BQ9H3T3 888 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms