RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-222ENST00000531967 C3orf58Q8NDZ4 430 aa6.21□□□□□ -1.42
ECHDC1-222ENST00000531967 DDX1Q92499 740 aaKnown RBP6.21□□□□□ -1.42
ECHDC1-222ENST00000531967 TCF7L1Q9HCS4 588 aa6.21□□□□□ -1.42
ECHDC1-222ENST00000531967 TMX2Q9Y320 296 aa6.21□□□□□ -1.42
ECHDC1-222ENST00000531967 ERBB4Q15303 1308 aa6.21□□□□□ -1.42
ECHDC1-222ENST00000531967 MAGEB6P1A0A0J9YX57 407 aa6.2□□□□□ -1.42
ECHDC1-222ENST00000531967 GADD45BO75293 160 aaPredicted RBP6.2□□□□□ -1.42
ECHDC1-222ENST00000531967 MAP3K6O95382 1288 aa6.2□□□□□ -1.42
ECHDC1-222ENST00000531967 ARAFP10398 606 aa6.2□□□□□ -1.42
ECHDC1-222ENST00000531967 SCTRP47872 440 aa6.2□□□□□ -1.42
ECHDC1-222ENST00000531967 CAMK2GQ13555 558 aaPredicted RBP6.2□□□□□ -1.42
ECHDC1-222ENST00000531967 IQCEQ6IPM2 695 aa6.2□□□□□ -1.42
ECHDC1-222ENST00000531967 FAM196AQ6ZSG2 479 aa6.2□□□□□ -1.42
ECHDC1-222ENST00000531967 ZNF713Q8N859 430 aaPredicted RBP6.2□□□□□ -1.42
ECHDC1-222ENST00000531967 CCT6BQ92526 530 aa6.2□□□□□ -1.42
ECHDC1-222ENST00000531967 BAP1Q92560 729 aa6.2□□□□□ -1.42
ECHDC1-222ENST00000531967 NAA15Q9BXJ9 866 aaKnown RBP6.2□□□□□ -1.42
ECHDC1-222ENST00000531967 XPO4Q9C0E2 1151 aaKnown RBP6.2□□□□□ -1.42
ECHDC1-222ENST00000531967 HDAC5Q9UQL6 1122 aa6.2□□□□□ -1.42
ECHDC1-222ENST00000531967 TTLL3Q9Y4R7 772 aa6.2□□□□□ -1.42
ECHDC1-222ENST00000531967 MAGED1Q9Y5V3 778 aaPredicted RBP6.2□□□□□ -1.42
ECHDC1-222ENST00000531967 SLC4A7Q9Y6M7 1214 aa6.2□□□□□ -1.42
ECHDC1-222ENST00000531967 A0A1B0GVC2 190 aa6.2□□□□□ -1.42
ECHDC1-222ENST00000531967 TRIM64CA6NLI5 447 aa6.2□□□□□ -1.42
ECHDC1-222ENST00000531967 CNOT4O95628 575 aaKnown RBP6.2□□□□□ -1.42
ECHDC1-222ENST00000531967 IFIT1P09914 478 aaKnown RBP6.2□□□□□ -1.42
ECHDC1-222ENST00000531967 L1CAMP32004 1257 aa6.2□□□□□ -1.42
ECHDC1-222ENST00000531967 IREB2P48200 963 aaKnown RBP6.2□□□□□ -1.42
ECHDC1-222ENST00000531967 ALDH5A1P51649 535 aaPredicted RBP6.2□□□□□ -1.42
ECHDC1-222ENST00000531967 DGKZQ13574 1117 aa6.2□□□□□ -1.42
ECHDC1-222ENST00000531967 DHCR24Q15392 516 aa6.2□□□□□ -1.42
ECHDC1-222ENST00000531967 NBPF8Q3BBV2 869 aa6.2□□□□□ -1.42
ECHDC1-222ENST00000531967 C11orf91Q3C1V1 193 aa6.2□□□□□ -1.42
ECHDC1-222ENST00000531967 FCHSD1Q86WN1 690 aa6.2□□□□□ -1.42
ECHDC1-222ENST00000531967 LSRQ86X29 649 aaPredicted RBP6.2□□□□□ -1.42
ECHDC1-222ENST00000531967 MYLK4Q86YV6 388 aaPredicted RBP6.2□□□□□ -1.42
ECHDC1-222ENST00000531967 SPATA5Q8NB90 893 aa6.2□□□□□ -1.42
ECHDC1-222ENST00000531967 APPL2Q8NEU8 664 aa6.2□□□□□ -1.42
ECHDC1-222ENST00000531967 PLD4Q96BZ4 506 aa6.2□□□□□ -1.42
ECHDC1-222ENST00000531967 NGLY1Q96IV0 654 aa6.2□□□□□ -1.42
ECHDC1-222ENST00000531967 BCL2L12Q9HB09 334 aa6.2□□□□□ -1.42
ECHDC1-222ENST00000531967 TMEM63CQ9P1W3 806 aa6.2□□□□□ -1.42
ECHDC1-222ENST00000531967 FNIP2Q9P278 1114 aa6.2□□□□□ -1.42
ECHDC1-222ENST00000531967 SAP30BPQ9UHR5 308 aaKnown RBP6.2□□□□□ -1.42
ECHDC1-222ENST00000531967 TOR1BO14657 336 aa6.19□□□□□ -1.42
ECHDC1-222ENST00000531967 PLCG2P16885 1265 aa6.19□□□□□ -1.42
ECHDC1-222ENST00000531967 PFKPQ01813 784 aa6.19□□□□□ -1.42
ECHDC1-222ENST00000531967 PROX2Q3B8N5 592 aa6.19□□□□□ -1.42
ECHDC1-222ENST00000531967 ZC3H12AQ5D1E8 599 aaKnown RBP6.19□□□□□ -1.42
ECHDC1-222ENST00000531967 FOXB2Q5VYV0 432 aa6.19□□□□□ -1.42
ECHDC1-222ENST00000531967 ANKRD24Q8TF21 1146 aa6.19□□□□□ -1.42
ECHDC1-222ENST00000531967 NUP133Q8WUM0 1156 aa6.19□□□□□ -1.42
ECHDC1-222ENST00000531967 HVCN1Q96D96 273 aa6.19□□□□□ -1.42
ECHDC1-222ENST00000531967 TRIM44Q96DX7 344 aaPredicted RBP6.19□□□□□ -1.42
ECHDC1-222ENST00000531967 IFT43Q96FT9 208 aa6.19□□□□□ -1.42
ECHDC1-222ENST00000531967 PRKRIP1Q9H875 184 aaPredicted RBP6.19□□□□□ -1.42
ECHDC1-222ENST00000531967 TRMT13Q9NUP7 481 aaKnown RBP6.19□□□□□ -1.42
ECHDC1-222ENST00000531967 SCHIP1Q9P0W5 487 aaPredicted RBP6.19□□□□□ -1.42
ECHDC1-222ENST00000531967 TSR3Q9UJK0 312 aaKnown RBP6.19□□□□□ -1.42
ECHDC1-222ENST00000531967 ANKRD6Q9Y2G4 727 aa6.19□□□□□ -1.42
ECHDC1-222ENST00000531967 LRRFIP2Q9Y608 721 aaKnown RBP6.19□□□□□ -1.42
ECHDC1-222ENST00000531967 ITIH6Q6UXX5 1313 aa6.19□□□□□ -1.42
ECHDC1-222ENST00000531967 SMTNL1A8MU46 457 aa6.19□□□□□ -1.42
ECHDC1-222ENST00000531967 TLR5O60602 858 aa6.19□□□□□ -1.42
ECHDC1-222ENST00000531967 INMTO95050 263 aa6.19□□□□□ -1.42
ECHDC1-222ENST00000531967 RPLP1P05386 114 aaKnown RBP6.19□□□□□ -1.42
ECHDC1-222ENST00000531967 HSD3B1P14060 373 aa6.19□□□□□ -1.42
ECHDC1-222ENST00000531967 LPOP22079 712 aaPredicted RBP6.19□□□□□ -1.42
ECHDC1-222ENST00000531967 GTF2E1P29083 439 aaPredicted RBP6.19□□□□□ -1.42
ECHDC1-222ENST00000531967 MCM4P33991 863 aa6.19□□□□□ -1.42
ECHDC1-222ENST00000531967 RAD52P43351 418 aa6.19□□□□□ -1.42
ECHDC1-222ENST00000531967 PSMA6P60900 246 aaKnown RBP6.19□□□□□ -1.42
ECHDC1-222ENST00000531967 LMNB2Q03252 620 aa6.19□□□□□ -1.42
ECHDC1-222ENST00000531967 GTF2H3Q13889 308 aa6.19□□□□□ -1.42
ECHDC1-222ENST00000531967 GRM2Q14416 872 aa6.19□□□□□ -1.42
ECHDC1-222ENST00000531967 ABCB5Q2M3G0 1257 aa6.19□□□□□ -1.42
ECHDC1-222ENST00000531967 IER5LQ5T953 404 aa6.19□□□□□ -1.42
ECHDC1-222ENST00000531967 SWSAP1Q6NVH7 229 aa6.19□□□□□ -1.42
ECHDC1-222ENST00000531967 PKN3Q6P5Z2 889 aa6.19□□□□□ -1.42
ECHDC1-222ENST00000531967 GALNT5Q7Z7M9 940 aa6.19□□□□□ -1.42
ECHDC1-222ENST00000531967 TBC1D1Q86TI0 1168 aaPredicted RBP6.19□□□□□ -1.42
ECHDC1-222ENST00000531967 AHI1Q8N157 1196 aa6.19□□□□□ -1.42
ECHDC1-222ENST00000531967 FAM26EQ8N5C1 309 aa6.19□□□□□ -1.42
ECHDC1-222ENST00000531967 KISS1RQ969F8 398 aaPredicted RBP6.19□□□□□ -1.42
ECHDC1-222ENST00000531967 ZFYVE28Q9HCC9 887 aa6.19□□□□□ -1.42
ECHDC1-222ENST00000531967 RRN3Q9NYV6 651 aa6.19□□□□□ -1.42
ECHDC1-222ENST00000531967 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.19□□□□□ -1.42
ECHDC1-222ENST00000531967 C19orf81C9J6K1 198 aa6.18□□□□□ -1.42
ECHDC1-222ENST00000531967 INHAP05111 366 aa6.18□□□□□ -1.42
ECHDC1-222ENST00000531967 ASGR2P07307 311 aa6.18□□□□□ -1.42
ECHDC1-222ENST00000531967 POTEIP0CG38 1075 aa6.18□□□□□ -1.42
ECHDC1-222ENST00000531967 CYP2C19P33261 490 aa6.18□□□□□ -1.42
ECHDC1-222ENST00000531967 PLA2G4AP47712 749 aa6.18□□□□□ -1.42
ECHDC1-222ENST00000531967 INTS11Q5TA45 600 aaKnown RBP6.18□□□□□ -1.42
ECHDC1-222ENST00000531967 HGSNATQ68CP4 663 aa6.18□□□□□ -1.42
ECHDC1-222ENST00000531967 HEATR6Q6AI08 1181 aaKnown RBP6.18□□□□□ -1.42
ECHDC1-222ENST00000531967 C11orf74Q86VG3 221 aa6.18□□□□□ -1.42
ECHDC1-222ENST00000531967 EGFL6Q8IUX8 553 aa6.18□□□□□ -1.42
ECHDC1-222ENST00000531967 SEPT12Q8IYM1 358 aa6.18□□□□□ -1.42
ECHDC1-222ENST00000531967 ARL6IP6Q8N6S5 226 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms