RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 SCUBE1Q8IWY4 988 aa5.57□□□□□ -1.52
AC055878.1-201ENST00000531858 GALNT6Q8NCL4 622 aa5.57□□□□□ -1.52
AC055878.1-201ENST00000531858 WDR66Q8TBY9 1149 aa5.57□□□□□ -1.52
AC055878.1-201ENST00000531858 DDX54Q8TDD1 881 aaKnown RBP5.57□□□□□ -1.52
AC055878.1-201ENST00000531858 TARS2Q9BW92 718 aaKnown RBP5.57□□□□□ -1.52
AC055878.1-201ENST00000531858 CLEC4MQ9H2X3 399 aaPredicted RBP5.57□□□□□ -1.52
AC055878.1-201ENST00000531858 ENAMQ9NRM1 1142 aa5.57□□□□□ -1.52
AC055878.1-201ENST00000531858 SLC5A4Q9NY91 659 aa5.57□□□□□ -1.52
AC055878.1-201ENST00000531858 SFMBT1Q9UHJ3 866 aa5.57□□□□□ -1.52
AC055878.1-201ENST00000531858 POLR3KQ9Y2Y1 108 aaPredicted RBP5.57□□□□□ -1.52
AC055878.1-201ENST00000531858 NFKBIEO00221 500 aa5.56□□□□□ -1.52
AC055878.1-201ENST00000531858 GPR39O43194 453 aa5.56□□□□□ -1.52
AC055878.1-201ENST00000531858 B3GALT4O96024 378 aa5.56□□□□□ -1.52
AC055878.1-201ENST00000531858 FOSP01100 380 aaPredicted RBP5.56□□□□□ -1.52
AC055878.1-201ENST00000531858 FGAP02671 866 aa5.56□□□□□ -1.52
AC055878.1-201ENST00000531858 FAM157BP0CG42 384 aa5.56□□□□□ -1.52
AC055878.1-201ENST00000531858 CCNFP41002 786 aa5.56□□□□□ -1.52
AC055878.1-201ENST00000531858 LRRC41Q15345 812 aa5.56□□□□□ -1.52
AC055878.1-201ENST00000531858 SPRED3Q2MJR0 410 aa5.56□□□□□ -1.52
AC055878.1-201ENST00000531858 BBS9Q3SYG4 887 aa5.56□□□□□ -1.52
AC055878.1-201ENST00000531858 TRIM61Q5EBN2 209 aa5.56□□□□□ -1.52
AC055878.1-201ENST00000531858 RUFY4Q6ZNE9 571 aa5.56□□□□□ -1.52
AC055878.1-201ENST00000531858 C14orf80Q86SX3 495 aa5.56□□□□□ -1.52
AC055878.1-201ENST00000531858 ZBTB46Q86UZ6 589 aa5.56□□□□□ -1.52
AC055878.1-201ENST00000531858 SPATS2Q86XZ4 545 aaKnown RBP5.56□□□□□ -1.52
AC055878.1-201ENST00000531858 IFNL3Q8IZI9 196 aa5.56□□□□□ -1.52
AC055878.1-201ENST00000531858 MAGEB6Q8N7X4 407 aa5.56□□□□□ -1.52
AC055878.1-201ENST00000531858 UBR7Q8N806 425 aa5.56□□□□□ -1.52
AC055878.1-201ENST00000531858 GAL3ST3Q96A11 431 aa5.56□□□□□ -1.52
AC055878.1-201ENST00000531858 CDC6Q99741 560 aa5.56□□□□□ -1.52
AC055878.1-201ENST00000531858 TIMMDC1Q9NPL8 285 aa5.56□□□□□ -1.52
AC055878.1-201ENST00000531858 GMIPQ9P107 970 aa5.56□□□□□ -1.52
AC055878.1-201ENST00000531858 MRPS23Q9Y3D9 190 aaKnown RBP5.56□□□□□ -1.52
AC055878.1-201ENST00000531858 TRBV23-1A0A0A0MS06 115 aa5.55□□□□□ -1.52
AC055878.1-201ENST00000531858 TRAV20A0A0B4J274 112 aa5.55□□□□□ -1.52
AC055878.1-201ENST00000531858 KRTAP9-6A0A140TA67 174 aa5.55□□□□□ -1.52
AC055878.1-201ENST00000531858 PDE2AO00408 941 aaPredicted RBP5.55□□□□□ -1.52
AC055878.1-201ENST00000531858 TNFRSF10CO14798 259 aa5.55□□□□□ -1.52
AC055878.1-201ENST00000531858 KATNA1O75449 491 aa5.55□□□□□ -1.52
AC055878.1-201ENST00000531858 HSP90AA1P07900 732 aaKnown RBP5.55□□□□□ -1.52
AC055878.1-201ENST00000531858 TARSP26639 723 aaKnown RBP5.55□□□□□ -1.52
AC055878.1-201ENST00000531858 NRLP54845 237 aa5.55□□□□□ -1.52
AC055878.1-201ENST00000531858 HNRNPUQ00839 825 aaKnown RBP eCLIP5.55□□□□□ -1.52
AC055878.1-201ENST00000531858 PTSQ03393 145 aa5.55□□□□□ -1.52
AC055878.1-201ENST00000531858 ITKQ08881 620 aa5.55□□□□□ -1.52
AC055878.1-201ENST00000531858 POU4F2Q12837 409 aa5.55□□□□□ -1.52
AC055878.1-201ENST00000531858 MTMR1Q13613 665 aa5.55□□□□□ -1.52
AC055878.1-201ENST00000531858 HSP90AA2PQ14568 343 aaPredicted RBP5.55□□□□□ -1.52
AC055878.1-201ENST00000531858 CBX2Q14781 532 aaPredicted RBP5.55□□□□□ -1.52
AC055878.1-201ENST00000531858 MLC1Q15049 377 aa5.55□□□□□ -1.52
AC055878.1-201ENST00000531858 FIGNL1Q6PIW4 674 aa5.55□□□□□ -1.52
AC055878.1-201ENST00000531858 LYSMD3Q7Z3D4 306 aa5.55□□□□□ -1.52
AC055878.1-201ENST00000531858 PCGF5Q86SE9 256 aa5.55□□□□□ -1.52
AC055878.1-201ENST00000531858 SULF2Q8IWU5 870 aa5.55□□□□□ -1.52
AC055878.1-201ENST00000531858 Q8N3U1 123 aa5.55□□□□□ -1.52
AC055878.1-201ENST00000531858 EXOC2Q96KP1 924 aa5.55□□□□□ -1.52
AC055878.1-201ENST00000531858 PNMA5Q96PV4 448 aa5.55□□□□□ -1.52
AC055878.1-201ENST00000531858 ARPC5LQ9BPX5 153 aa5.55□□□□□ -1.52
AC055878.1-201ENST00000531858 CASS4Q9NQ75 786 aa5.55□□□□□ -1.52
AC055878.1-201ENST00000531858 PRDM11Q9NQV5 511 aa5.55□□□□□ -1.52
AC055878.1-201ENST00000531858 SWAP70Q9UH65 585 aa5.55□□□□□ -1.52
AC055878.1-201ENST00000531858 PNMA2Q9UL42 364 aa5.55□□□□□ -1.52
AC055878.1-201ENST00000531858 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.55□□□□□ -1.52
AC055878.1-201ENST00000531858 ZEB2O60315 1214 aa5.54□□□□□ -1.52
AC055878.1-201ENST00000531858 RAPGEF3O95398 923 aa5.54□□□□□ -1.52
AC055878.1-201ENST00000531858 TRIM27P14373 513 aa5.54□□□□□ -1.52
AC055878.1-201ENST00000531858 NME1P15531 152 aaKnown RBP5.54□□□□□ -1.52
AC055878.1-201ENST00000531858 DGKGP49619 791 aa5.54□□□□□ -1.52
AC055878.1-201ENST00000531858 SUMO1P63165 101 aaKnown RBP5.54□□□□□ -1.52
AC055878.1-201ENST00000531858 SLC7A5Q01650 507 aa5.54□□□□□ -1.52
AC055878.1-201ENST00000531858 ZNF252P-AS1Q0IIN9 211 aa5.54□□□□□ -1.52
AC055878.1-201ENST00000531858 PCSK7Q16549 785 aa5.54□□□□□ -1.52
AC055878.1-201ENST00000531858 TMEM95Q3KNT9 176 aa5.54□□□□□ -1.52
AC055878.1-201ENST00000531858 CDCP2Q5VXM1 449 aa5.54□□□□□ -1.52
AC055878.1-201ENST00000531858 UNC5AQ6ZN44 842 aa5.54□□□□□ -1.52
AC055878.1-201ENST00000531858 ANKLE2Q86XL3 938 aa5.54□□□□□ -1.52
AC055878.1-201ENST00000531858 BSNDQ8WZ55 320 aa5.54□□□□□ -1.52
AC055878.1-201ENST00000531858 DCAF5Q96JK2 942 aa5.54□□□□□ -1.52
AC055878.1-201ENST00000531858 ZNF512BQ96KM6 892 aaPredicted RBP5.54□□□□□ -1.52
AC055878.1-201ENST00000531858 INSM2Q96T92 566 aaPredicted RBP5.54□□□□□ -1.52
AC055878.1-201ENST00000531858 MENTQ9BUN1 341 aa5.54□□□□□ -1.52
AC055878.1-201ENST00000531858 PBX4Q9BYU1 374 aa5.54□□□□□ -1.52
AC055878.1-201ENST00000531858 ZCCHC2Q9C0B9 1178 aaKnown RBP5.54□□□□□ -1.52
AC055878.1-201ENST00000531858 POLMQ9NP87 494 aaPredicted RBP5.54□□□□□ -1.52
AC055878.1-201ENST00000531858 AASDHPPTQ9NRN7 309 aa5.54□□□□□ -1.52
AC055878.1-201ENST00000531858 CACNA2D2Q9NY47 1150 aa5.54□□□□□ -1.52
AC055878.1-201ENST00000531858 LAS1LQ9Y4W2 734 aaKnown RBP5.54□□□□□ -1.52
AC055878.1-201ENST00000531858 SNCAIPQ9Y6H5 919 aa5.54□□□□□ -1.52
AC055878.1-201ENST00000531858 TTLL8A6PVC2 850 aa5.53□□□□□ -1.52
AC055878.1-201ENST00000531858 EFSO43281 561 aa5.53□□□□□ -1.52
AC055878.1-201ENST00000531858 NRDCO43847 1150 aa5.53□□□□□ -1.52
AC055878.1-201ENST00000531858 EFCAB14O75071 495 aa5.53□□□□□ -1.52
AC055878.1-201ENST00000531858 ABLIM3O94929 683 aa5.53□□□□□ -1.52
AC055878.1-201ENST00000531858 HTR3BO95264 441 aa5.53□□□□□ -1.52
AC055878.1-201ENST00000531858 FGFR1P11362 822 aa5.53□□□□□ -1.52
AC055878.1-201ENST00000531858 PHKG2P15735 406 aa5.53□□□□□ -1.52
AC055878.1-201ENST00000531858 CD53P19397 219 aa5.53□□□□□ -1.52
AC055878.1-201ENST00000531858 FAPQ12884 760 aa5.53□□□□□ -1.52
AC055878.1-201ENST00000531858 RGL3Q3MIN7 710 aa5.53□□□□□ -1.52
AC055878.1-201ENST00000531858 EFHC2Q5JST6 749 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms