RNA–Protein interactions for RNA: ENST00000531857.1

PKP3-208, Transcript of plakophilin 3, humanhuman

TSL 4

Gene PKP3, Length 687 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-208ENST00000531857 IRX3P78415 501 aaPredicted RBP21.27■■□□□ 1
PKP3-208ENST00000531857 FRAT1Q92837 279 aaPredicted RBP21.27■■□□□ 1
PKP3-208ENST00000531857 DBNDD2Q9BQY9 259 aa21.27■■□□□ 1
PKP3-208ENST00000531857 TMOD4Q9NZQ9 345 aa21.27■■□□□ 1
PKP3-208ENST00000531857 PALD1Q9ULE6 856 aa21.27■■□□□ 1
PKP3-208ENST00000531857 ZMYND8Q9ULU4 1186 aaPredicted RBP21.27■■□□□ 1
PKP3-208ENST00000531857 FRMPD3Q5JV73 1810 aa21.27■□□□□ 0.99
PKP3-208ENST00000531857 FLT1P17948 1338 aa21.27■□□□□ 0.99
PKP3-208ENST00000531857 COL6A3P12111 3177 aa21.26■□□□□ 0.99
PKP3-208ENST00000531857 IPO8O15397 1037 aaKnown RBP21.26■□□□□ 0.99
PKP3-208ENST00000531857 GDF11O95390 407 aa21.26■□□□□ 0.99
PKP3-208ENST00000531857 BAG3O95817 575 aa21.26■□□□□ 0.99
PKP3-208ENST00000531857 CYP2E1P05181 493 aaPredicted RBP21.26■□□□□ 0.99
PKP3-208ENST00000531857 PPP4CP60510 307 aa21.26■□□□□ 0.99
PKP3-208ENST00000531857 TNNI3KQ59H18 835 aa21.26■□□□□ 0.99
PKP3-208ENST00000531857 TTC39AQ5SRH9 613 aa21.26■□□□□ 0.99
PKP3-208ENST00000531857 ATF7IPQ6VMQ6 1270 aa21.26■□□□□ 0.99
PKP3-208ENST00000531857 METTL16Q86W50 562 aaKnown RBP21.26■□□□□ 0.99
PKP3-208ENST00000531857 GDF15Q99988 308 aa21.26■□□□□ 0.99
PKP3-208ENST00000531857 NBPF3Q9H094 633 aa21.26■□□□□ 0.99
PKP3-208ENST00000531857 FPGT-TNNI3KV9GXZ4 949 aa21.26■□□□□ 0.99
PKP3-208ENST00000531857 PLCG2P16885 1265 aa21.25■□□□□ 0.99
PKP3-208ENST00000531857 HERVK_113P62684 666 aa21.25■□□□□ 0.99
PKP3-208ENST00000531857 POTEEQ6S8J3 1075 aa21.25■□□□□ 0.99
PKP3-208ENST00000531857 FOXP4Q8IVH2 680 aaPredicted RBP21.25■□□□□ 0.99
PKP3-208ENST00000531857 GPRC5AQ8NFJ5 357 aa21.25■□□□□ 0.99
PKP3-208ENST00000531857 RBPJLQ9UBG7 517 aa21.25■□□□□ 0.99
PKP3-208ENST00000531857 SAP30BPQ9UHR5 308 aaKnown RBP21.25■□□□□ 0.99
PKP3-208ENST00000531857 OGDHLQ9ULD0 1010 aa21.25■□□□□ 0.99
PKP3-208ENST00000531857 C19orf81C9J6K1 198 aa21.24■□□□□ 0.99
PKP3-208ENST00000531857 PRKAR2AP13861 404 aaKnown RBP21.24■□□□□ 0.99
PKP3-208ENST00000531857 SYN1P17600 705 aa21.24■□□□□ 0.99
PKP3-208ENST00000531857 POLA2Q14181 598 aa21.24■□□□□ 0.99
PKP3-208ENST00000531857 Q3C1V9 767 aa21.24■□□□□ 0.99
PKP3-208ENST00000531857 MAP3K21Q5TCX8 1036 aa21.24■□□□□ 0.99
PKP3-208ENST00000531857 CRACR2BQ8N4Y2 399 aaPredicted RBP21.24■□□□□ 0.99
PKP3-208ENST00000531857 C11orf49Q9H6J7 331 aa21.24■□□□□ 0.99
PKP3-208ENST00000531857 GPR108Q9NPR9 543 aa21.24■□□□□ 0.99
PKP3-208ENST00000531857 USP17L10C9JJH3 530 aa21.23■□□□□ 0.99
PKP3-208ENST00000531857 BMP8BP34820 402 aa21.23■□□□□ 0.99
PKP3-208ENST00000531857 CCDC158Q5M9N0 1113 aa21.23■□□□□ 0.99
PKP3-208ENST00000531857 NUDT12Q9BQG2 462 aa21.23■□□□□ 0.99
PKP3-208ENST00000531857 PIH1D3Q9NQM4 214 aaKnown RBP21.23■□□□□ 0.99
PKP3-208ENST00000531857 EMILIN3Q9NT22 766 aa21.23■□□□□ 0.99
PKP3-208ENST00000531857 ZBTB21Q9ULJ3 1066 aa21.23■□□□□ 0.99
PKP3-208ENST00000531857 XRCC5P13010 732 aaKnown RBP21.22■□□□□ 0.99
PKP3-208ENST00000531857 ZAP70P43403 619 aa21.22■□□□□ 0.99
PKP3-208ENST00000531857 DYNLL1P63167 89 aaKnown RBP21.22■□□□□ 0.99
PKP3-208ENST00000531857 TMEM57Q8N5G2 664 aa21.22■□□□□ 0.99
PKP3-208ENST00000531857 TRIM34Q9BYJ4 488 aa21.22■□□□□ 0.99
PKP3-208ENST00000531857 PORCNQ9H237 461 aa21.22■□□□□ 0.99
PKP3-208ENST00000531857 PFASO15067 1338 aa21.22■□□□□ 0.99
PKP3-208ENST00000531857 SLC17A8Q8NDX2 589 aa21.21■□□□□ 0.99
PKP3-208ENST00000531857 SOCS4Q8WXH5 440 aa21.21■□□□□ 0.99
PKP3-208ENST00000531857 USP6NLQ92738 828 aa21.21■□□□□ 0.99
PKP3-208ENST00000531857 MAPK4P31152 587 aa21.2■□□□□ 0.98
PKP3-208ENST00000531857 ERVK-9P63128 1117 aa21.2■□□□□ 0.98
PKP3-208ENST00000531857 ERVK-24P63145 666 aa21.2■□□□□ 0.98
PKP3-208ENST00000531857 CACNB2Q08289 660 aaPredicted RBP21.2■□□□□ 0.98
PKP3-208ENST00000531857 OS9Q13438 667 aaPredicted RBP21.2■□□□□ 0.98
PKP3-208ENST00000531857 CCL14Q16627 93 aa21.2■□□□□ 0.98
PKP3-208ENST00000531857 SSH3Q8TE77 659 aa21.2■□□□□ 0.98
PKP3-208ENST00000531857 PAGR1Q9BTK6 254 aa21.2■□□□□ 0.98
PKP3-208ENST00000531857 GINM1Q9NU53 330 aa21.2■□□□□ 0.98
PKP3-208ENST00000531857 SURF6O75683 361 aaKnown RBP21.19■□□□□ 0.98
PKP3-208ENST00000531857 ZKSCAN1P17029 563 aaPredicted RBP21.19■□□□□ 0.98
PKP3-208ENST00000531857 CCND3P30281 292 aaPredicted RBP21.19■□□□□ 0.98
PKP3-208ENST00000531857 MAGEA10P43363 369 aaPredicted RBP21.19■□□□□ 0.98
PKP3-208ENST00000531857 ATP8B2P98198 1209 aa21.19■□□□□ 0.98
PKP3-208ENST00000531857 MORN1Q5T089 497 aa21.19■□□□□ 0.98
PKP3-208ENST00000531857 GPR142Q7Z601 462 aa21.19■□□□□ 0.98
PKP3-208ENST00000531857 ZNF512BQ96KM6 892 aaPredicted RBP21.19■□□□□ 0.98
PKP3-208ENST00000531857 C1orf115Q9H7X2 142 aa21.19■□□□□ 0.98
PKP3-208ENST00000531857 TLR7Q9NYK1 1049 aaKnown RBP21.19■□□□□ 0.98
PKP3-208ENST00000531857 DBNLQ9UJU6 430 aaKnown RBP21.19■□□□□ 0.98
PKP3-208ENST00000531857 GH2P01242 217 aa21.18■□□□□ 0.98
PKP3-208ENST00000531857 CYP7A1P22680 504 aa21.18■□□□□ 0.98
PKP3-208ENST00000531857 PDE3AQ14432 1141 aa21.18■□□□□ 0.98
PKP3-208ENST00000531857 USP17L2Q6R6M4 530 aa21.18■□□□□ 0.98
PKP3-208ENST00000531857 DLL1O00548 723 aa21.17■□□□□ 0.98
PKP3-208ENST00000531857 HLA-DOAP06340 250 aa21.17■□□□□ 0.98
PKP3-208ENST00000531857 COL6A1P12109 1028 aa21.17■□□□□ 0.98
PKP3-208ENST00000531857 ZYXQ15942 572 aaKnown RBP21.17■□□□□ 0.98
PKP3-208ENST00000531857 LHX8Q68G74 356 aa21.17■□□□□ 0.98
PKP3-208ENST00000531857 PLEKHH3Q7Z736 793 aa21.17■□□□□ 0.98
PKP3-208ENST00000531857 CCAR1Q8IX12 1150 aaKnown RBP21.17■□□□□ 0.98
PKP3-208ENST00000531857 TRMT44Q8IYL2 757 aaKnown RBP21.17■□□□□ 0.98
PKP3-208ENST00000531857 MIGA1Q8NAN2 632 aa21.17■□□□□ 0.98
PKP3-208ENST00000531857 CCDC8Q9H0W5 538 aaPredicted RBP21.17■□□□□ 0.98
PKP3-208ENST00000531857 CNMDO75829 334 aa21.16■□□□□ 0.98
PKP3-208ENST00000531857 RGS2P41220 211 aa21.16■□□□□ 0.98
PKP3-208ENST00000531857 ZKSCAN2Q63HK3 967 aa21.16■□□□□ 0.98
PKP3-208ENST00000531857 TATDN1Q6P1N9 297 aa21.16■□□□□ 0.98
PKP3-208ENST00000531857 Q7L0L9 218 aa21.16■□□□□ 0.98
PKP3-208ENST00000531857 NDUFB9Q9Y6M9 179 aa21.16■□□□□ 0.98
PKP3-208ENST00000531857 DNAH12Q6ZR08 3092 aa21.15■□□□□ 0.98
PKP3-208ENST00000531857 IDH1O75874 414 aaKnown RBP21.15■□□□□ 0.98
PKP3-208ENST00000531857 GTF3C2Q8WUA4 911 aaPredicted RBP21.15■□□□□ 0.98
PKP3-208ENST00000531857 EAF2Q96CJ1 260 aaPredicted RBP21.15■□□□□ 0.98
PKP3-208ENST00000531857 APBA2Q99767 749 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 162.1 ms