RNA–Protein interactions for RNA: ENST00000531589.5

SF3B2-212, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-212ENST00000531589 GOLIM4O00461 696 aa15.92■□□□□ 0.14
SF3B2-212ENST00000531589 GDF11O95390 407 aa15.92■□□□□ 0.14
SF3B2-212ENST00000531589 IRX3P78415 501 aaPredicted RBP15.92■□□□□ 0.14
SF3B2-212ENST00000531589 MTMR2Q13614 643 aa15.92■□□□□ 0.14
SF3B2-212ENST00000531589 CRNKL1Q9BZJ0 848 aaKnown RBP15.92■□□□□ 0.14
SF3B2-212ENST00000531589 ASCC2Q9H1I8 757 aaPredicted RBP15.92■□□□□ 0.14
SF3B2-212ENST00000531589 ZBTB21Q9ULJ3 1066 aa15.92■□□□□ 0.14
SF3B2-212ENST00000531589 HTTP42858 3142 aa15.91■□□□□ 0.14
SF3B2-212ENST00000531589 POLR3DP05423 398 aaPredicted RBP15.91■□□□□ 0.14
SF3B2-212ENST00000531589 PDE6AP16499 860 aa15.91■□□□□ 0.14
SF3B2-212ENST00000531589 ATP5JP18859 108 aa15.91■□□□□ 0.14
SF3B2-212ENST00000531589 FLT3LGP49771 235 aa15.91■□□□□ 0.14
SF3B2-212ENST00000531589 IRF5Q13568 498 aa15.91■□□□□ 0.14
SF3B2-212ENST00000531589 TATDN1Q6P1N9 297 aa15.91■□□□□ 0.14
SF3B2-212ENST00000531589 PXYLP1Q8TE99 480 aa15.91■□□□□ 0.14
SF3B2-212ENST00000531589 RIOK1Q9BRS2 568 aaKnown RBP15.91■□□□□ 0.14
SF3B2-212ENST00000531589 LRRCC1Q9C099 1032 aa15.91■□□□□ 0.14
SF3B2-212ENST00000531589 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.91■□□□□ 0.142e-6■■□□□ 12.3
SF3B2-212ENST00000531589 PTPRFP10586 1907 aa15.9■□□□□ 0.14
SF3B2-212ENST00000531589 ZSWIM8A7E2V4 1837 aa15.9■□□□□ 0.14
SF3B2-212ENST00000531589 ADCY3O60266 1144 aa15.9■□□□□ 0.14
SF3B2-212ENST00000531589 CAPN2P17655 700 aa15.9■□□□□ 0.14
SF3B2-212ENST00000531589 HOXA7P31268 230 aaPredicted RBP15.9■□□□□ 0.14
SF3B2-212ENST00000531589 GCC1Q96CN9 775 aa15.9■□□□□ 0.14
SF3B2-212ENST00000531589 CABP5Q9NP86 173 aa15.9■□□□□ 0.14
SF3B2-212ENST00000531589 PAG1Q9NWQ8 432 aa15.9■□□□□ 0.14
SF3B2-212ENST00000531589 GABRQQ9UN88 632 aa15.9■□□□□ 0.14
SF3B2-212ENST00000531589 ZNF532Q9HCE3 1301 aa15.9■□□□□ 0.14
SF3B2-212ENST00000531589 KIAA0100Q14667 2235 aaKnown RBP15.9■□□□□ 0.14
SF3B2-212ENST00000531589 FOCADQ5VW36 1801 aa15.89■□□□□ 0.13
SF3B2-212ENST00000531589 GH2P01242 217 aa15.89■□□□□ 0.13
SF3B2-212ENST00000531589 GJB1P08034 283 aa15.89■□□□□ 0.13
SF3B2-212ENST00000531589 CCL5P13501 91 aa15.89■□□□□ 0.13
SF3B2-212ENST00000531589 JAG1P78504 1218 aa15.89■□□□□ 0.13
SF3B2-212ENST00000531589 MTFR1Q15390 333 aa15.89■□□□□ 0.13
SF3B2-212ENST00000531589 CERKLQ49MI3 558 aaPredicted RBP15.89■□□□□ 0.13
SF3B2-212ENST00000531589 USP17L2Q6R6M4 530 aa15.89■□□□□ 0.13
SF3B2-212ENST00000531589 GTF3C2Q8WUA4 911 aaPredicted RBP15.89■□□□□ 0.13
SF3B2-212ENST00000531589 RNF208Q9H0X6 261 aa15.89■□□□□ 0.13
SF3B2-212ENST00000531589 BOLA2Q9H3K6 86 aa15.89■□□□□ 0.13
SF3B2-212ENST00000531589 TAOK2Q9UL54 1235 aa15.89■□□□□ 0.13
SF3B2-212ENST00000531589 ATAD5Q96QE3 1844 aa15.89■□□□□ 0.13
SF3B2-212ENST00000531589 MYO5AQ9Y4I1 1855 aaKnown RBP15.88■□□□□ 0.13
SF3B2-212ENST00000531589 USP14P54578 494 aa15.88■□□□□ 0.13
SF3B2-212ENST00000531589 ABCB5Q2M3G0 1257 aa15.88■□□□□ 0.13
SF3B2-212ENST00000531589 C20orf194Q5TEA3 1177 aa15.88■□□□□ 0.13
SF3B2-212ENST00000531589 ZSCAN25Q6NSZ9 544 aa15.88■□□□□ 0.13
SF3B2-212ENST00000531589 FEZ1Q99689 392 aa15.88■□□□□ 0.13
SF3B2-212ENST00000531589 MCM9Q9NXL9 1143 aa15.88■□□□□ 0.13
SF3B2-212ENST00000531589 MORF4L1Q9UBU8 362 aa15.88■□□□□ 0.13
SF3B2-212ENST00000531589 LOC285556D6RIA3 1793 aa15.87■□□□□ 0.13
SF3B2-212ENST00000531589 SIPA1L1O43166 1804 aa15.87■□□□□ 0.13
SF3B2-212ENST00000531589 GJA8P48165 433 aa15.87■□□□□ 0.13
SF3B2-212ENST00000531589 RAB3GAP1Q15042 981 aa15.87■□□□□ 0.13
SF3B2-212ENST00000531589 CCAR1Q8IX12 1150 aaKnown RBP15.87■□□□□ 0.13
SF3B2-212ENST00000531589 GPRC5AQ8NFJ5 357 aa15.87■□□□□ 0.13
SF3B2-212ENST00000531589 P2RX7Q99572 595 aaKnown RBP15.87■□□□□ 0.13
SF3B2-212ENST00000531589 HAUS7Q99871 368 aa15.87■□□□□ 0.13
SF3B2-212ENST00000531589 CDK5RAP2Q96SN8 1893 aa15.86■□□□□ 0.13
SF3B2-212ENST00000531589 TCRBV5S4A2TA0A5A2 114 aa15.86■□□□□ 0.13
SF3B2-212ENST00000531589 SLC34A2O95436 690 aa15.86■□□□□ 0.13
SF3B2-212ENST00000531589 ADD2P35612 726 aa15.86■□□□□ 0.13
SF3B2-212ENST00000531589 PLCD1P51178 756 aa15.86■□□□□ 0.13
SF3B2-212ENST00000531589 HERVK_113P62684 666 aa15.86■□□□□ 0.13
SF3B2-212ENST00000531589 AMOTL1Q8IY63 956 aa15.86■□□□□ 0.13
SF3B2-212ENST00000531589 DDRGK1Q96HY6 314 aa15.86■□□□□ 0.13
SF3B2-212ENST00000531589 GPATCH3Q96I76 525 aa15.86■□□□□ 0.13
SF3B2-212ENST00000531589 C12orf42Q96LP6 360 aa15.86■□□□□ 0.13
SF3B2-212ENST00000531589 DCP1AQ9NPI6 582 aaPredicted RBP15.86■□□□□ 0.13
SF3B2-212ENST00000531589 EMILIN3Q9NT22 766 aa15.86■□□□□ 0.13
SF3B2-212ENST00000531589 ATP8A2Q9NTI2 1148 aa15.86■□□□□ 0.13
SF3B2-212ENST00000531589 MGAMO43451 1857 aa15.85■□□□□ 0.13
SF3B2-212ENST00000531589 USP17L15C9J2P7 530 aa15.85■□□□□ 0.13
SF3B2-212ENST00000531589 USP17L13C9JLJ4 530 aa15.85■□□□□ 0.13
SF3B2-212ENST00000531589 USP17L11C9JVI0 530 aa15.85■□□□□ 0.13
SF3B2-212ENST00000531589 USP17L18D6R9N7 530 aa15.85■□□□□ 0.13
SF3B2-212ENST00000531589 USP17L22D6RA61 530 aa15.85■□□□□ 0.13
SF3B2-212ENST00000531589 USP17L17D6RBQ6 530 aa15.85■□□□□ 0.13
SF3B2-212ENST00000531589 USP17L19D6RCP7 530 aa15.85■□□□□ 0.13
SF3B2-212ENST00000531589 USP17L20D6RJB6 530 aa15.85■□□□□ 0.13
SF3B2-212ENST00000531589 INHAP05111 366 aa15.85■□□□□ 0.13
SF3B2-212ENST00000531589 ELNP15502 786 aa15.85■□□□□ 0.13
SF3B2-212ENST00000531589 SHMT1P34896 483 aa15.85■□□□□ 0.13
SF3B2-212ENST00000531589 USP17L24Q0WX57 530 aa15.85■□□□□ 0.13
SF3B2-212ENST00000531589 UBE3CQ15386 1083 aa15.85■□□□□ 0.13
SF3B2-212ENST00000531589 SHROOM1Q2M3G4 852 aaPredicted RBP15.85■□□□□ 0.13
SF3B2-212ENST00000531589 LCORLQ8N3X6 602 aa15.85■□□□□ 0.13
SF3B2-212ENST00000531589 SDR42E1Q8WUS8 393 aa15.85■□□□□ 0.13
SF3B2-212ENST00000531589 EDC3Q96F86 508 aaKnown RBP15.85■□□□□ 0.13
SF3B2-212ENST00000531589 KIAA1683Q9H0B3 1180 aa15.85■□□□□ 0.13
SF3B2-212ENST00000531589 ECHDC1Q9NTX5 307 aa15.85■□□□□ 0.13
SF3B2-212ENST00000531589 SWAP70Q9UH65 585 aa15.85■□□□□ 0.13
SF3B2-212ENST00000531589 MYH1P12882 1939 aa15.84■□□□□ 0.13
SF3B2-212ENST00000531589 MAPK4P31152 587 aa15.84■□□□□ 0.13
SF3B2-212ENST00000531589 GABPAQ06546 454 aa15.84■□□□□ 0.13
SF3B2-212ENST00000531589 U2AF1L4Q8WU68 220 aaKnown RBP15.84■□□□□ 0.13
SF3B2-212ENST00000531589 ARMT1Q9H993 441 aa15.84■□□□□ 0.13
SF3B2-212ENST00000531589 CENPFP49454 3210 aa15.83■□□□□ 0.13
SF3B2-212ENST00000531589 MPHOSPH10O00566 681 aaKnown RBP15.83■□□□□ 0.12
SF3B2-212ENST00000531589 MBD4O95243 580 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms