RNA–Protein interactions for RNA: ENST00000531043.1

HIF3A-214, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-214ENST00000531043 ATF7IPQ6VMQ6 1270 aa16.34■□□□□ 0.21
HIF3A-214ENST00000531043 METTL16Q86W50 562 aaKnown RBP16.34■□□□□ 0.21
HIF3A-214ENST00000531043 GDF15Q99988 308 aa16.34■□□□□ 0.21
HIF3A-214ENST00000531043 TBC1D2Q9BYX2 928 aa16.34■□□□□ 0.21
HIF3A-214ENST00000531043 HMX1Q9NP08 348 aaPredicted RBP16.34■□□□□ 0.21
HIF3A-214ENST00000531043 FPGT-TNNI3KV9GXZ4 949 aa16.34■□□□□ 0.21
HIF3A-214ENST00000531043 FLT1P17948 1338 aa16.34■□□□□ 0.21
HIF3A-214ENST00000531043 RPTORQ8N122 1335 aa16.34■□□□□ 0.21
HIF3A-214ENST00000531043 MYH1P12882 1939 aa16.33■□□□□ 0.21
HIF3A-214ENST00000531043 CUL9Q8IWT3 2517 aa16.33■□□□□ 0.2
HIF3A-214ENST00000531043 SYN1P17600 705 aa16.33■□□□□ 0.2
HIF3A-214ENST00000531043 HOXA7P31268 230 aaPredicted RBP16.33■□□□□ 0.2
HIF3A-214ENST00000531043 ZAP70P43403 619 aa16.33■□□□□ 0.2
HIF3A-214ENST00000531043 PPP4CP60510 307 aa16.33■□□□□ 0.2
HIF3A-214ENST00000531043 HERVK_113P62684 666 aa16.33■□□□□ 0.2
HIF3A-214ENST00000531043 TTC39AQ5SRH9 613 aa16.33■□□□□ 0.2
HIF3A-214ENST00000531043 TMEM57Q8N5G2 664 aa16.33■□□□□ 0.2
HIF3A-214ENST00000531043 PORCNQ9H237 461 aa16.33■□□□□ 0.2
HIF3A-214ENST00000531043 C1orf115Q9H7X2 142 aa16.33■□□□□ 0.2
HIF3A-214ENST00000531043 AS3MTQ9HBK9 375 aa16.33■□□□□ 0.2
HIF3A-214ENST00000531043 RBPJLQ9UBG7 517 aa16.33■□□□□ 0.2
HIF3A-214ENST00000531043 A0A1W2PPC1 479 aa16.32■□□□□ 0.2
HIF3A-214ENST00000531043 PFASO15067 1338 aa16.32■□□□□ 0.2
HIF3A-214ENST00000531043 ASNSP08243 561 aa16.32■□□□□ 0.2
HIF3A-214ENST00000531043 PRKAR2AP13861 404 aaKnown RBP16.32■□□□□ 0.2
HIF3A-214ENST00000531043 CCL14Q16627 93 aa16.32■□□□□ 0.2
HIF3A-214ENST00000531043 MAP3K21Q5TCX8 1036 aa16.32■□□□□ 0.2
HIF3A-214ENST00000531043 DNAH12Q6ZR08 3092 aa16.32■□□□□ 0.2
HIF3A-214ENST00000531043 NOL10Q9BSC4 688 aaKnown RBP16.32■□□□□ 0.2
HIF3A-214ENST00000531043 DHX36Q9H2U1 1008 aaKnown RBP16.32■□□□□ 0.2
HIF3A-214ENST00000531043 EMILIN3Q9NT22 766 aa16.32■□□□□ 0.2
HIF3A-214ENST00000531043 TLR7Q9NYK1 1049 aaKnown RBP16.32■□□□□ 0.2
HIF3A-214ENST00000531043 TMOD4Q9NZQ9 345 aa16.32■□□□□ 0.2
HIF3A-214ENST00000531043 OGDHLQ9ULD0 1010 aa16.32■□□□□ 0.2
HIF3A-214ENST00000531043 ZBTB21Q9ULJ3 1066 aa16.32■□□□□ 0.2
HIF3A-214ENST00000531043 IPO8O15397 1037 aaKnown RBP16.31■□□□□ 0.2
HIF3A-214ENST00000531043 BAG3O95817 575 aa16.31■□□□□ 0.2
HIF3A-214ENST00000531043 ANKLE1Q8NAG6 615 aa16.31■□□□□ 0.2
HIF3A-214ENST00000531043 GPRC5AQ8NFJ5 357 aa16.31■□□□□ 0.2
HIF3A-214ENST00000531043 USP6NLQ92738 828 aa16.31■□□□□ 0.2
HIF3A-214ENST00000531043 NBPF3Q9H094 633 aa16.31■□□□□ 0.2
HIF3A-214ENST00000531043 C11orf49Q9H6J7 331 aa16.31■□□□□ 0.2
HIF3A-214ENST00000531043 NDUFB9Q9Y6M9 179 aa16.31■□□□□ 0.2
HIF3A-214ENST00000531043 USP17L10C9JJH3 530 aa16.3■□□□□ 0.2
HIF3A-214ENST00000531043 PLCG2P16885 1265 aa16.3■□□□□ 0.2
HIF3A-214ENST00000531043 CAPN2P17655 700 aa16.3■□□□□ 0.2
HIF3A-214ENST00000531043 MAGEA10P43363 369 aaPredicted RBP16.3■□□□□ 0.2
HIF3A-214ENST00000531043 FOXP4Q8IVH2 680 aaPredicted RBP16.3■□□□□ 0.2
HIF3A-214ENST00000531043 CRACR2BQ8N4Y2 399 aaPredicted RBP16.3■□□□□ 0.2
HIF3A-214ENST00000531043 SSH3Q8TE77 659 aa16.3■□□□□ 0.2
HIF3A-214ENST00000531043 NUDT12Q9BQG2 462 aa16.3■□□□□ 0.2
HIF3A-214ENST00000531043 PAGR1Q9BTK6 254 aa16.3■□□□□ 0.2
HIF3A-214ENST00000531043 GPR108Q9NPR9 543 aa16.3■□□□□ 0.2
HIF3A-214ENST00000531043 DBNLQ9UJU6 430 aaKnown RBP16.3■□□□□ 0.2
HIF3A-214ENST00000531043 C19orf81C9J6K1 198 aa16.29■□□□□ 0.2
HIF3A-214ENST00000531043 SURF6O75683 361 aaKnown RBP16.29■□□□□ 0.2
HIF3A-214ENST00000531043 CNMDO75829 334 aa16.29■□□□□ 0.2
HIF3A-214ENST00000531043 GH2P01242 217 aa16.29■□□□□ 0.2
HIF3A-214ENST00000531043 CYP7A1P22680 504 aa16.29■□□□□ 0.2
HIF3A-214ENST00000531043 CCND3P30281 292 aaPredicted RBP16.29■□□□□ 0.2
HIF3A-214ENST00000531043 BMP8BP34820 402 aa16.29■□□□□ 0.2
HIF3A-214ENST00000531043 ERVK-9P63128 1117 aa16.29■□□□□ 0.2
HIF3A-214ENST00000531043 ERVK-24P63145 666 aa16.29■□□□□ 0.2
HIF3A-214ENST00000531043 ATP8B2P98198 1209 aa16.29■□□□□ 0.2
HIF3A-214ENST00000531043 CACNB2Q08289 660 aaPredicted RBP16.29■□□□□ 0.2
HIF3A-214ENST00000531043 ZYXQ15942 572 aaKnown RBP16.29■□□□□ 0.2
HIF3A-214ENST00000531043 CCDC158Q5M9N0 1113 aa16.29■□□□□ 0.2
HIF3A-214ENST00000531043 MORN1Q5T089 497 aa16.29■□□□□ 0.2
HIF3A-214ENST00000531043 Q7L0L9 218 aa16.29■□□□□ 0.2
HIF3A-214ENST00000531043 MIGA1Q8NAN2 632 aa16.29■□□□□ 0.2
HIF3A-214ENST00000531043 CCDC8Q9H0W5 538 aaPredicted RBP16.29■□□□□ 0.2
HIF3A-214ENST00000531043 FRMPD3Q5JV73 1810 aa16.29■□□□□ 0.2
HIF3A-214ENST00000531043 XRCC5P13010 732 aaKnown RBP16.28■□□□□ 0.2
HIF3A-214ENST00000531043 OS9Q13438 667 aaPredicted RBP16.28■□□□□ 0.2
HIF3A-214ENST00000531043 LHX8Q68G74 356 aa16.28■□□□□ 0.2
HIF3A-214ENST00000531043 GPR142Q7Z601 462 aa16.28■□□□□ 0.2
HIF3A-214ENST00000531043 SLC17A8Q8NDX2 589 aa16.28■□□□□ 0.2
HIF3A-214ENST00000531043 SOCS4Q8WXH5 440 aa16.28■□□□□ 0.2
HIF3A-214ENST00000531043 LAMA2P24043 3122 aaKnown RBP16.28■□□□□ 0.2
HIF3A-214ENST00000531043 ZKSCAN1P17029 563 aaPredicted RBP16.27■□□□□ 0.2
HIF3A-214ENST00000531043 ACER1Q8TDN7 264 aa16.27■□□□□ 0.2
HIF3A-214ENST00000531043 EAF2Q96CJ1 260 aaPredicted RBP16.27■□□□□ 0.2
HIF3A-214ENST00000531043 ZNF512BQ96KM6 892 aaPredicted RBP16.27■□□□□ 0.2
HIF3A-214ENST00000531043 TRIM34Q9BYJ4 488 aa16.27■□□□□ 0.2
HIF3A-214ENST00000531043 ANTXR1Q9H6X2 564 aa16.27■□□□□ 0.2
HIF3A-214ENST00000531043 FLRT1Q9NZU1 646 aa16.27■□□□□ 0.2
HIF3A-214ENST00000531043 DLL1O00548 723 aa16.26■□□□□ 0.19
HIF3A-214ENST00000531043 IDH1O75874 414 aaKnown RBP16.26■□□□□ 0.19
HIF3A-214ENST00000531043 COL6A1P12109 1028 aa16.26■□□□□ 0.19
HIF3A-214ENST00000531043 RLBP1P12271 317 aa16.26■□□□□ 0.19
HIF3A-214ENST00000531043 MAPK4P31152 587 aa16.26■□□□□ 0.19
HIF3A-214ENST00000531043 EVX2Q03828 476 aa16.26■□□□□ 0.19
HIF3A-214ENST00000531043 LRRC26Q2I0M4 334 aa16.26■□□□□ 0.19
HIF3A-214ENST00000531043 USP17L2Q6R6M4 530 aa16.26■□□□□ 0.19
HIF3A-214ENST00000531043 PLEKHH3Q7Z736 793 aa16.26■□□□□ 0.19
HIF3A-214ENST00000531043 NOP58Q9Y2X3 529 aaKnown RBP16.26■□□□□ 0.19
HIF3A-214ENST00000531043 HLA-DOAP06340 250 aa16.25■□□□□ 0.19
HIF3A-214ENST00000531043 PDE3AQ14432 1141 aa16.25■□□□□ 0.19
HIF3A-214ENST00000531043 ZKSCAN2Q63HK3 967 aa16.25■□□□□ 0.19
HIF3A-214ENST00000531043 MAGEB6Q8N7X4 407 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms